CN184899

Overview
NameCN184899
Unique NameCN184899
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length361
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN184899 vs. ExPASy Swiss-Prot
Match: RAB7_PRUAR (Ras-related protein Rab7 OS=Prunus armeniaca PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.235e-13
Identity = 37/49 (75.51%), Postives = 43/49 (87.76%), Query Frame = -2 
Query:  217 KKGFNVEAAFECIAKNRSEKNEPQEEDYLPDTIDV-GGGQQQRSSGCEC 360
            K+GFNV+ AF+CIAKN +  NEP+EE YLPDTIDV GGG+QQRSSGCEC
Sbjct:  160 KEGFNVDDAFQCIAKN-ALNNEPEEEIYLPDTIDVAGGGRQQRSSGCEC 207
[Close]
BLAST of CN184899 vs. ExPASy Swiss-Prot
Match: RAB7_GOSHI (Ras-related protein Rab7 OS=Gossypium hirsutum GN=RAB7 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.046e-12
Identity = 35/49 (71.43%), Postives = 43/49 (87.76%), Query Frame = -2 
Query:  217 KKGFNVEAAFECIAKNRSEKNEPQEEDYLPDTIDV-GGGQQQRSSGCEC 360
            K+GFNV+AAFECIA+N + KNEP+EE YLP+TIDV  GG+ QRS+GCEC
Sbjct:  160 KEGFNVDAAFECIARN-ALKNEPEEEIYLPETIDVASGGRPQRSTGCEC 207
The following BLAST results are available for this feature:
BLAST of CN184899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
RAB7_PRUAR1.235e-1375.51Ras-related protein Rab7 OS=Prunus armeniaca PE=2 ... [more]
RAB7_GOSHI1.046e-1271.43Ras-related protein Rab7 OS=Gossypium hirsutum GN=... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_0006F05_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006F05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184899 ID=CN184899; Name=CN184899; organism=Citrus sinensis; type=EST; length=361bp
TGATTACAAAGCATAAAACAATTAGATTCCAGATGATATAGAAAAAGGAA
GGGTAAAAACAATGCAAACATAGTGGAATACAGTCCAAGGCACTAGTATT
GTACATTGAATTTGATTAATATTCCCCGCTTTATTGCTGCATGGCAAATT
GATCTGACGGTGACCTCACTTGCATTCCACCAGTTACAACAGAACCACCT
ACGAGCCCCAGTTTTAACATTCACAACCCGAAGATCTCTGCTGCTGGCCA
CCGCCGACATCAATGGTGTCTGGAAGATAATCTTCTTCTTGAGGTTCATT
TTTTTCAGAGCGGTTTTTGGCTATACACTCAAAAGCAGCTTCTACATTGA
AACCCTTCTTT
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