CN184872
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184872 vs. ExPASy Swiss-Prot
Match: FTCD_RAT (Formimidoyltransferase-cyclodeaminase OS=Rattus norvegicus GN=Ftcd PE=1 SV=4) HSP 1 Score: 71.2478 bits (173), Expect = 5.970e-12 Identity = 62/213 (29.11%), Postives = 94/213 (44.13%), Query Frame = 2 Query: 35 IAMADAAYGAINLETHSGAHPRLGVVDDIVFHPLARASLDEAAWLAKAVAADIGSRFQVPVFLY--AAAHPTGKPLDTIRRELGYYRPNSMGNQWAGWTMPEILPERPNEGPIQVSPARGIAMIGARPWVALYNIPIMSTDVAATRRIARMVSARG------GGLPTVQTLG-LVHGEDSTEIACMLLEPNQVGADRVQNRVEKLAAEEGLDV 646 ++ A A I++ H G HPR+G +D F P+ S+DE AKA + VPV+LY AA P+ + L IR G Y + A W P+ GP P+ G + GAR ++ +NI ++ST A RIA + +G G L VQ +G + ++ +++ LL+ V + A E L V Sbjct: 63 LSAARTASQLIDMRKHKGEHPRMGALDVCPFIPVRGVSMDECVLCAKAFGQRLAEELNVPVYLYGEAAQMPSRQTLPAIR--AGEYEALPEKLKQAEWV--------PDFGPSSFVPSWGATVTGARKFLIAFNINLLSTKEQA-HRIALNLREQGRGKDQPGRLKKVQGIGWYLEEKNLAQVSTNLLDFEVTALHTVYEEARREAQELNLPV 264
BLAST of CN184872 vs. ExPASy Swiss-Prot
Match: FTCD_PIG (Formimidoyltransferase-cyclodeaminase OS=Sus scrofa GN=FTCD PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.870e-11 Identity = 60/208 (28.85%), Postives = 88/208 (42.31%), Query Frame = 2 Query: 44 ADAAYGAINLETHSGAHPRLGVVDDIVFHPLARASLDEAAWLAKAVAADIGSRFQVPVFLYAAAHPTGKPLDTIRRELGYYRPNSMGNQWAGWTMPEILPERPNEGPIQVSPARGIAMIGARPWVALYNIPIMSTDVAATRRIARMVSARG------GGLPTVQTLGLVHGEDS-TEIACMLLEPNQVGADRVQNRVEKLAAEEGLDV 646 A AAY I++ H G HPR+G +D F P+ ++DE A+A + VPV+LY A T G Y + A W P+ GP P+ G + GAR ++ +NI ++ST A RIA + +G G L VQ +G E + +++ LL+ G V + A E L V Sbjct: 66 ARAAYQLIDMSRHHGEHPRMGALDVCPFIPVRGVTMDECVRCAQAFGQRLAEELGVPVYLYGEAARTAGRQSLPALRAGEYEALPEKLKQAEWA--------PDFGPSAFVPSWGATVAGARKFLLAFNINLLSTREQA-HRIALDLREQGRGKDQPGRLKKVQAIGWYLDEKNLAQVSTNLLDFEVTGLHTVFEETCREAQELSLPV 264
BLAST of CN184872 vs. ExPASy Swiss-Prot
Match: FTCD_MOUSE (Formimidoyltransferase-cyclodeaminase OS=Mus musculus GN=Ftcd PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.870e-11 Identity = 64/230 (27.83%), Postives = 100/230 (43.48%), Query Frame = 2 Query: 2 RAIYSPLRQTIIAMADAAYGA------INLETHSGAHPRLGVVDDIVFHPLARASLDEAAWLAKAVAADIGSRFQVPVFLY--AAAHPTGKPLDTIRRELGYYRPNSMGNQWAGWTMPEILPERPNEGPIQVSPARGIAMIGARPWVALYNIPIMSTDVAATRRIARMVSARG------GGLPTVQTLG-LVHGEDSTEIACMLLEPNQVGADRVQNRVEKLAAEEGLDV 646 R +Y+ + Q + A + A I++ H G HPR+G +D F P+ S++E AKA + VPV+LY AA P+ + L IR G Y + A W P+ GP P+ G + GAR ++ +NI ++ST A RIA + +G G L VQ +G + ++ +++ LL+ V + A E L V Sbjct: 46 RTVYTFVGQPECVVEGALHAARTASQLIDMSKHKGEHPRMGALDVCPFIPVRGVSMEECVLCAKAFGQRLAEELNVPVYLYGEAAQTPSRQTLPAIR--AGEYEALPEKLKQAEWV--------PDFGPSSFVPSWGATVTGARKFLIAFNINLLSTKEQA-HRIALNLREQGRGKDQPGRLKKVQGIGWYLEEKNLAQVSTNLLDFEVTALHTVFEEARREAQELNLPV 264 The following BLAST results are available for this feature:
BLAST of CN184872 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN184872 ID=CN184872; Name=CN184872; organism=Citrus sinensis; type=EST; length=712bpback to top |