CN184858
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN184858 vs. ExPASy Swiss-Prot
Match: CHLG_AVESA (Chlorophyll synthase, chloroplastic OS=Avena sativa GN=CHLG PE=1 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 6.266e-62 Identity = 110/135 (81.48%), Postives = 118/135 (87.41%), Query Frame = 1 Query: 301 PDKAPAASGSSFNQLLGIKGAARETNKWKIRLQLTKPVTWPPLIWGIVCGAAASGNFHWNLEDVAKSIVCMIMSGPCLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVITQIWVXXXXXXXXXXXXDVWA 705 PDKAPAA GSSFNQLLGIKGA +ETN WKIRLQLTKPVTWPPL+WG++CGAAASGNFHW +EDV KSIVCM+MSGPCLTGYTQTINDWYDR+IDAINEPYRPIPSGAISENEVITQIWV D+WA Sbjct: 62 PDKAPAA-GSSFNQLLGIKGAKQETNIWKIRLQLTKPVTWPPLVWGVLCGAAASGNFHWTVEDVTKSIVCMLMSGPCLTGYTQTINDWYDRDIDAINEPYRPIPSGAISENEVITQIWVLLLGGLGLGALLDIWA 195
BLAST of CN184858 vs. ExPASy Swiss-Prot
Match: CHLG_ARATH (Chlorophyll synthase, chloroplastic OS=Arabidopsis thaliana GN=CHLG PE=2 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 1.396e-61 Identity = 110/141 (78.01%), Postives = 120/141 (85.11%), Query Frame = 1 Query: 283 KLNRRAPDKAPAASGSSFNQLLGIKGAARETNKWKIRLQLTKPVTWPPLIWGIVCGAAASGNFHWNLEDVAKSIVCMIMSGPCLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVITQIWVXXXXXXXXXXXXDVWA 705 K+ + PDKAPA GSS NQLLGIKGA++ETNKWKIRLQLTKPVTWPPL+WG+VCGAAASGNFHW EDVAKSI+CM+MSGPCLTGYTQTINDWYDR+IDAINEPYRPIPSGAISE EVITQ+WV DVWA Sbjct: 65 KVKSQTPDKAPAG-GSSINQLLGIKGASQETNKWKIRLQLTKPVTWPPLVWGVVCGAAASGNFHWTPEDVAKSILCMMMSGPCLTGYTQTINDWYDRDIDAINEPYRPIPSGAISEPEVITQVWVLLLGGLGIAGILDVWA 204
BLAST of CN184858 vs. ExPASy Swiss-Prot
Match: CHLG_ORYSJ (Chlorophyll synthase, chloroplastic OS=Oryza sativa subsp. japonica GN=CHLG PE=2 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 1.182e-60 Identity = 109/136 (80.15%), Postives = 117/136 (86.03%), Query Frame = 1 Query: 298 APDKAPAASGSSFNQLLGIKGAARETNKWKIRLQLTKPVTWPPLIWGIVCGAAASGNFHWNLEDVAKSIVCMIMSGPCLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVITQIWVXXXXXXXXXXXXDVWA 705 AP+KAPA GSSFNQLLGIKGA +E + WKIRLQLTKPVTWPPL+WG++CGAAASGNFHW +EDVAKSIVCMIMSGPCLTGYTQTINDWYDR+IDAINEPYRPIPSGAISENEVITQIW DVWA Sbjct: 59 APEKAPAG-GSSFNQLLGIKGAKQENDIWKIRLQLTKPVTWPPLVWGVLCGAAASGNFHWTVEDVAKSIVCMIMSGPCLTGYTQTINDWYDRDIDAINEPYRPIPSGAISENEVITQIWALLLAGLGLGALLDVWA 193
BLAST of CN184858 vs. ExPASy Swiss-Prot
Match: BCHG_CHLAA (Bacteriochlorophyll synthase 34 kDa chain OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=bchG PE=4 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 4.252e-18 Identity = 44/87 (50.57%), Postives = 58/87 (66.67%), Query Frame = 1 Query: 382 WKIR-LQLTKPVTWPPLIWGIVCGAAASGNFHWNLEDVAKSIVCMIMSGPCLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEV 639 W +R +QL KPVTW W +CGA ASG WN E + + ++ M M+GP L G +Q +ND+ DRE+DAINEP+R IPSG +S V Sbjct: 28 WLVRSIQLMKPVTWFAPTWAFMCGAIASGALGWN-ESIGRLLLGMFMAGPILCGLSQVVNDYADREVDAINEPHRLIPSGQVSLRHV 113
BLAST of CN184858 vs. ExPASy Swiss-Prot
Match: BCHG_RHOCA (Bacteriochlorophyll synthase 33 kDa chain OS=Rhodobacter capsulatus GN=bchG PE=4 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.369e-15 Identity = 37/77 (48.05%), Postives = 52/77 (67.53%), Query Frame = 1 Query: 394 LQLTKPVTWPPLIWGIVCGAAASGNFHWNLEDVAKSIVCMIMSGPCLTGYTQTINDWYDREIDAINEPYRPIPSGAI 624 L+L KPVTW P +W +CGA +S W + V ++ ++++GP + G +Q NDW DR +DAINEP+RPIPSG I Sbjct: 20 LELIKPVTWFPPMWAYLCGAVSSNVPIWENKGVV--VLGIVLAGPIVCGMSQAANDWCDRHVDAINEPHRPIPSGRI 94
BLAST of CN184858 vs. ExPASy Swiss-Prot
Match: BCHG_RHOS4 (Bacteriochlorophyll synthase 33 kDa chain OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=bchG PE=4 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.118e-13 Identity = 34/77 (44.16%), Postives = 49/77 (63.64%), Query Frame = 1 Query: 394 LQLTKPVTWPPLIWGIVCGAAASGNFHWNLEDVAKSIVCMIMSGPCLTGYTQTINDWYDREIDAINEPYRPIPSGAI 624 L+L +P+TW P IW +CG + G W E ++ M+++GP + G +Q N+W DR +DA+NEP RPIPSG I Sbjct: 19 LELIQPITWFPPIWAYLCGTVSVGI--WPGEKWPLVLLGMVLAGPLVCGMSQAANNWCDRHVDAVNEPDRPIPSGRI 93 The following BLAST results are available for this feature:
BLAST of CN184858 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN184858 ID=CN184858; Name=CN184858; organism=Citrus sinensis; type=EST; length=706bpback to top |