CN184848

Overview
NameCN184848
Unique NameCN184848
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length619
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10200 contig Csv1_Contig10200:92..710. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN184848 vs. ExPASy Swiss-Prot
Match: SUSY_SOYBN (Sucrose synthase OS=Glycine max GN=SS PE=1 SV=2)

HSP 1 Score: 310.842 bits (795), Expect = 3.450e-84
Identity = 153/185 (82.70%), Postives = 166/185 (89.73%), Query Frame = 2
Query:   65 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRKHLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHXXXXXXXXXXXYLHFKEELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEFLRVH 619
            MA   LTRVHSLRERLDETL+A+RNEILALLSRIE KGKGILQ+HQ+IAEFE I EENR+ LT+GAFGEVLR+TQEAIVLPPWVALAVRPRPGVWEY+RVNVH           YLHFKEELVDG SNGNFVLELDFEPFNA+FPRPTL+KSIGNGV+FLNRHLSAKLFHDKES+HPLLEFLR+H
Sbjct:    1 MATDRLTRVHSLRERLDETLTANRNEILALLSRIEAKGKGILQHHQVIAEFEEIPEENRQKLTDGAFGEVLRSTQEAIVLPPWVALAVRPRPGVWEYLRVNVHALVVEELQPAEYLHFKEELVDGSSNGNFVLELDFEPFNAAFPRPTLNKSIGNGVQFLNRHLSAKLFHDKESLHPLLEFLRLH 185          
BLAST of CN184848 vs. ExPASy Swiss-Prot
Match: SUSY_PHAAU (Sucrose synthase OS=Phaseolus aureus GN=SS1 PE=1 SV=1)

HSP 1 Score: 308.145 bits (788), Expect = 2.236e-83
Identity = 153/185 (82.70%), Postives = 165/185 (89.19%), Query Frame = 2
Query:   65 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRKHLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHXXXXXXXXXXXYLHFKEELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEFLRVH 619
            MA   LTRVHSLRERLDETLSA+RNEILALLSRIEGKGKGILQ+HQ+IAEFE I EE+R+ LT+GAFGEVLR+TQEAIVLPPWVALAVRPRPGVWEY+RVNVH           YL FKEELVDG SNGNFVLELDFEPF ASFPRPTL+KSIGNGV+FLNRHLSAKLFHDKES+HPLLEFLR+H
Sbjct:    1 MATDRLTRVHSLRERLDETLSANRNEILALLSRIEGKGKGILQHHQVIAEFEEIPEESRQKLTDGAFGEVLRSTQEAIVLPPWVALAVRPRPGVWEYLRVNVHALVVEVLQPAEYLRFKEELVDGSSNGNFVLELDFEPFTASFPRPTLNKSIGNGVQFLNRHLSAKLFHDKESLHPLLEFLRLH 185          
BLAST of CN184848 vs. ExPASy Swiss-Prot
Match: SUSY_ALNGL (Sucrose synthase OS=Alnus glutinosa GN=SUS1 PE=2 SV=1)

HSP 1 Score: 307.375 bits (786), Expect = 3.815e-83
Identity = 154/185 (83.24%), Postives = 162/185 (87.57%), Query Frame = 2
Query:   65 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRKHLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHXXXXXXXXXXXYLHFKEELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEFLRVH 619
            MAER LTRVHSLRERLDETL A+RNEI+ALLSRI GKGKGI +NHQLIAE E+I E  RK L +GAFGEVLR+ QEAIVLPPWVALAVRPRPGVWEYIRVNVH           YLHFKEELVDG +NGNFVLELDF+PFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEFLRVH
Sbjct:    1 MAERVLTRVHSLRERLDETLVANRNEIVALLSRIIGKGKGICRNHQLIAEVEAIPEATRKKLLDGAFGEVLRSAQEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEELRVPEYLHFKEELVDGSTNGNFVLELDFDPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEFLRVH 185          
BLAST of CN184848 vs. ExPASy Swiss-Prot
Match: SUSY_VICFA (Sucrose synthase OS=Vicia faba GN=SUCS PE=2 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 3.229e-82
Identity = 150/185 (81.08%), Postives = 164/185 (88.65%), Query Frame = 2
Query:   65 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRKHLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHXXXXXXXXXXXYLHFKEELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEFLRVH 619
            MA   LTRVHSLRERLDETL+A+RNEILALLSRIE KGKGILQ+HQ+IAEFE I EENR+ LT+GAFGEVLR+TQEAIVLPPWVALAVRPRPGVWEY+RVNVH           +L FKEELVDG +NGNFVLELDFEPF ASFPRPTL+KSIGNGV+FLNRHLSAKLFHDKES+HPLLEFLR+H
Sbjct:    1 MATERLTRVHSLRERLDETLTANRNEILALLSRIEAKGKGILQHHQVIAEFEEIPEENRQKLTDGAFGEVLRSTQEAIVLPPWVALAVRPRPGVWEYLRVNVHALVVENLQPAEFLKFKEELVDGSANGNFVLELDFEPFTASFPRPTLNKSIGNGVQFLNRHLSAKLFHDKESLHPLLEFLRLH 185          
BLAST of CN184848 vs. ExPASy Swiss-Prot
Match: SUSY_MEDSA (Sucrose synthase OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 299.286 bits (765), Expect = 1.039e-80
Identity = 146/185 (78.92%), Postives = 163/185 (88.11%), Query Frame = 2
Query:   65 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRKHLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHXXXXXXXXXXXYLHFKEELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEFLRVH 619
            MA   LTRVHSL+ERLDETL+A+RNEILALLSR+E KGKGILQ+HQ+IAEFE I EE+R+ LT+GAFGEVLR+TQEAIVLPPWVALAVRPRPG+WEY+RVNVH           +L FKEELVDG +NGNFVLELDFEPF ASFPRPTL+KSIGNGV FLNRHLSAKLFHDKES+HPLLEFLR+H
Sbjct:    1 MATERLTRVHSLKERLDETLTANRNEILALLSRLEAKGKGILQHHQVIAEFEEIPEESRQKLTDGAFGEVLRSTQEAIVLPPWVALAVRPRPGIWEYLRVNVHALVVENLQPAEFLKFKEELVDGSANGNFVLELDFEPFTASFPRPTLNKSIGNGVHFLNRHLSAKLFHDKESLHPLLEFLRLH 185          
BLAST of CN184848 vs. ExPASy Swiss-Prot
Match: SUS1_SOLTU (Sucrose synthase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 9.418e-74
Identity = 136/185 (73.51%), Postives = 155/185 (83.78%), Query Frame = 2
Query:   65 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRKHLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHXXXXXXXXXXXYLHFKEELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEFLRVH 619
            MAER LTRVHSLRER+D TL+AHRNEIL  LSRIE  GKGIL+ H+L+AEF++I ++++  L E AF E+L++TQEAIVLPPWVALA+R RPGVWEYIRVNV+           YL FKEELVDG SNGNFVLELDFEPF ASFP+PTL+KSIGNGVEFLNRHLSAK+FHDKESM PLLEFLR H
Sbjct:    1 MAERVLTRVHSLRERVDATLAAHRNEILLFLSRIESHGKGILKPHELLAEFDAIRQDDKNKLNEHAFEELLKSTQEAIVLPPWVALAIRLRPGVWEYIRVNVNALVVEELSVPEYLQFKEELVDGASNGNFVLELDFEPFTASFPKPTLTKSIGNGVEFLNRHLSAKMFHDKESMTPLLEFLRAH 185          
BLAST of CN184848 vs. ExPASy Swiss-Prot
Match: SUS2_SOLTU (Sucrose synthase OS=Solanum tuberosum PE=3 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 1.606e-73
Identity = 138/185 (74.59%), Postives = 155/185 (83.78%), Query Frame = 2
Query:   65 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRKHLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHXXXXXXXXXXXYLHFKEELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEFLRVH 619
            MAER LTRVHSLRERLD TL+AHRNEIL  LSRIE  GKGIL+ HQL+AEFESI +E++  L + AF EVL++TQEAIVLPPWVALA+R RPGVWEY+RVNV+           +L FKEELV+G SN NFVLELDFEPF ASFP+PTL+KSIGNGVEFLNRHLSAK+FHDKESM PLLEFLRVH
Sbjct:    1 MAERVLTRVHSLRERLDATLAAHRNEILLFLSRIESHGKGILKPHQLLAEFESIHKEDKDKLNDHAFEEVLKSTQEAIVLPPWVALAIRLRPGVWEYVRVNVNALIVEELTVPEFLQFKEELVNGTSNDNFVLELDFEPFTASFPKPTLTKSIGNGVEFLNRHLSAKMFHDKESMTPLLEFLRVH 185          
BLAST of CN184848 vs. ExPASy Swiss-Prot
Match: SUSY_SOLLC (Sucrose synthase OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 1.041e-72
Identity = 134/185 (72.43%), Postives = 153/185 (82.70%), Query Frame = 2
Query:   65 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRKHLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHXXXXXXXXXXXYLHFKEELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEFLRVH 619
            MAER LTRVH LRER+D TL AHRNEIL  LSRIE  GKGIL+ H+L+AEF++I ++++  L E AF E+L++TQEAIVLPPWVALA+R RPGVWEY+RVNV+           YL FKEELVDG SNGNFVLELDFEPF ASFP+PTL+KSIGNGVEFLNRHLSAK+FHDKESM PLLEFLR H
Sbjct:    1 MAERVLTRVHRLRERVDATLCAHRNEILLFLSRIESHGKGILKPHELLAEFDAIRQDDKDKLNEHAFEELLKSTQEAIVLPPWVALAIRLRPGVWEYVRVNVNALVVEELSVPEYLQFKEELVDGASNGNFVLELDFEPFTASFPKPTLTKSIGNGVEFLNRHLSAKMFHDKESMAPLLEFLRAH 185          
BLAST of CN184848 vs. ExPASy Swiss-Prot
Match: SUS1_ARATH (Sucrose synthase 1 OS=Arabidopsis thaliana GN=SUS1 PE=2 SV=3)

HSP 1 Score: 270.781 bits (691), Expect = 3.957e-72
Identity = 132/184 (71.74%), Postives = 153/184 (83.15%), Query Frame = 2
Query:   68 AERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRKHLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHXXXXXXXXXXXYLHFKEELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEFLRVH 619
            AER +TRVHS RERL+ETL + RNE+LALLSR+E KGKGILQ +Q+IAEFE++ E+ RK L  G F ++L++TQEAIVLPPWVALAVRPRPGVWEY+RVN+H           +LHFKEELVDG  NGNF LELDFEPFNAS PRPTL K IGNGV+FLNRHLSAKLFHDKES+ PLL+FLR+H
Sbjct:    4 AERMITRVHSQRERLNETLVSERNEVLALLSRVEAKGKGILQQNQIIAEFEALPEQTRKKLEGGPFFDLLKSTQEAIVLPPWVALAVRPRPGVWEYLRVNLHALVVEELQPAEFLHFKEELVDGVKNGNFTLELDFEPFNASIPRPTLHKYIGNGVDFLNRHLSAKLFHDKESLLPLLKFLRLH 187          
BLAST of CN184848 vs. ExPASy Swiss-Prot
Match: SUS1_DAUCA (Sucrose synthase isoform 1 OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 1.078e-69
Identity = 131/187 (70.05%), Postives = 151/187 (80.75%), Query Frame = 2
Query:   65 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRKHLTEG--AFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHXXXXXXXXXXXYLHFKEELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEFLRVH 619
            M E  LTRVHSLRER+D TL+ HRNEIL  LSRIE  GKGIL+ HQL+AE+E+IS+E++  L +G  AF EV+++TQEAIV PPWVALA+R RPGVWEY+RVNVH           YL FKEELV G S+ NFVLELDF PF ASFPRPTL+KSIGNGVEFLNRHLSAK+FH K+SMHPLLEFLR+H
Sbjct:    1 MGEPVLTRVHSLRERMDSTLANHRNEILMFLSRIESHGKGILKPHQLLAEYEAISKEDKLKLDDGHGAFAEVIKSTQEAIVSPPWVALAIRLRPGVWEYVRVNVHHLVVEELSVPQYLQFKEELVIGSSDANFVLELDFAPFTASFPRPTLTKSIGNGVEFLNRHLSAKMFHGKDSMHPLLEFLRLH 187          
The following BLAST results are available for this feature:
BLAST of CN184848 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
SUSY_SOYBN3.450e-8482.70Sucrose synthase OS=Glycine max GN=SS PE=1 SV=2[more]
SUSY_PHAAU2.236e-8382.70Sucrose synthase OS=Phaseolus aureus GN=SS1 PE=1 S... [more]
SUSY_ALNGL3.815e-8383.24Sucrose synthase OS=Alnus glutinosa GN=SUS1 PE=2 S... [more]
SUSY_VICFA3.229e-8281.08Sucrose synthase OS=Vicia faba GN=SUCS PE=2 SV=1[more]
SUSY_MEDSA1.039e-8078.92Sucrose synthase OS=Medicago sativa PE=2 SV=1[more]
SUS1_SOLTU9.418e-7473.51Sucrose synthase OS=Solanum tuberosum PE=2 SV=1[more]
SUS2_SOLTU1.606e-7374.59Sucrose synthase OS=Solanum tuberosum PE=3 SV=1[more]
SUSY_SOLLC1.041e-7272.43Sucrose synthase OS=Solanum lycopersicum PE=2 SV=1[more]
SUS1_ARATH3.957e-7271.74Sucrose synthase 1 OS=Arabidopsis thaliana GN=SUS1... [more]
SUS1_DAUCA1.078e-6970.05Sucrose synthase isoform 1 OS=Daucus carota PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006D14_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006D14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184848 ID=CN184848; Name=CN184848; organism=Citrus sinensis; type=EST; length=619bp
GAGGCTACCGTCCGTACGTTTTTCTTGTTTTCTCTAGTTGAAGTTTTTGT
TTGTCTGAGAATCAATGGCCGAACGTGCTTTGACCCGCGTTCACAGTCTC
CGCGAGCGTTTGGATGAGACTCTCTCTGCCCACAGGAATGAAATCTTGGC
CCTTTTGTCAAGGATTGAGGGCAAGGGCAAGGGAATCTTGCAAAACCATC
AACTTATTGCTGAGTTTGAATCAATTTCTGAGGAAAACAGAAAGCATCTA
ACTGAGGGGGCATTTGGTGAAGTTCTAAGAGCCACCCAGGAAGCAATTGT
TTTGCCTCCGTGGGTAGCGCTTGCCGTGCGTCCAAGGCCCGGTGTGTGGG
AGTACATCCGAGTGAATGTCCATGCCCTTGTCGTTGAGGAGCTGCTTGTA
GCCGAGTACCTGCACTTCAAGGAGGAACTTGTCGATGGAGGCTCCAATGG
CAACTTCGTGCTTGAGTTGGATTTTGAGCCATTCAATGCCTCGTTCCCTC
GCCCAACTCTTTCAAAGTCTATTGGAAATGGTGTGGAATTCCTTAACCGC
CACCTTTCTGCGAAGCTCTTCCATGACAAGGAGAGCATGCATCCACTGCT
TGAATTTCTCCGCGTCCAC
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