CN184831
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184831 vs. ExPASy Swiss-Prot
Match: TTG1_ARATH (Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis thaliana GN=TTG1 PE=1 SV=1) HSP 1 Score: 378.252 bits (970), Expect = 2.958e-104 Identity = 184/249 (73.90%), Postives = 214/249 (85.94%), Query Frame = 1 Query: 103 MENSSQESHLRSENSVTHESPYPLYAMAVC------GQRIAIGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPXXXXXXXXXXXHLLASSGDFLRLWDVGD--SSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVI 825 M+NS+ +S RSE +VT++SPYPLYAMA G RIA+GSF+EDY NR+D++SF+ +S+++K P+LSF+HPYPPTKLMF P LLASSGDFLRLW++ + S++EP++VLNNSK+SEFCAPLTSFDWN++EPKR+GTCSIDTTCTIWDIEK VVETQLIAHDKEV+DI WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVI Sbjct: 1 MDNSAPDSLSRSETAVTYDSPYPLYAMAFSSLRSSSGHRIAVGSFLEDYNNRIDILSFDSDSMTVKPLPNLSFEHPYPPTKLMFSPPSLRRPSSGD--LLASSGDFLRLWEINEDSSTVEPISVLNNSKTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDKEVHDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVI 247
BLAST of CN184831 vs. ExPASy Swiss-Prot
Match: LWD1_ARATH (WD repeat-containing protein LWD1 OS=Arabidopsis thaliana GN=LWD1 PE=2 SV=1) HSP 1 Score: 286.574 bits (732), Expect = 1.171e-76 Identity = 147/248 (59.27%), Postives = 182/248 (73.39%), Query Frame = 1 Query: 103 MENSSQESHLRSENSVTHESPYPLYAMAVCGQR-----IAIGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPXXXXXXXXXXXHLLASSGDFLRLWDVGD--SSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVI 825 +++ S E RSE T+E+P+ +YAM +R +AI S +E Y NRV++V + + I++ P+LSF+HPYPPTK +F P LLA+S DFLRLW + D S +E + LN++K+SEFC PLTSFDWNE EP+RIGT S DTTCTIWDIE+ V+TQLIAHDKEV+DI WG VFASVSADGSVR+FDLRDKEHSTIIYES +PDTPL+RL WNKQD RYMATI+MDS KVV+ Sbjct: 8 IQDGSDEQQKRSE-IYTYEAPWHIYAMNWSVRRDKKYRLAITSLLEQYPNRVEIVQLDESNGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPD----LLATSSDFLRLWRIADDHSRVELKSCLNSNKNSEFCGPLTSFDWNEAEPRRIGTSSTDTTCTIWDIEREAVDTQLIAHDKEVFDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVV 250
BLAST of CN184831 vs. ExPASy Swiss-Prot
Match: LWD2_ARATH (WD repeat-containing protein LWD2 OS=Arabidopsis thaliana GN=LWD2 PE=2 SV=1) HSP 1 Score: 277.715 bits (709), Expect = 5.441e-74 Identity = 143/249 (57.43%), Postives = 180/249 (72.29%), Query Frame = 1 Query: 100 KMENSSQESHLRSENSVTHESPYPLYAMAVCGQR-----IAIGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPXXXXXXXXXXXHLLASSGDFLRLWDVGD--SSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVI 825 +++N S+E RSE T+E+P+ +YAM +R +AI S IE Y NRV++V + + I++ P+L F+HPYPPTK F P LLA+S DFLRLW + D S +E + L++ K+SEF P+TSFDWNE EP+RIGT SIDTTCTIWDIE+ VV+TQLIAHDKEVYDI WG VFASVS DGSVR+FDLRDKEHSTIIYES +P TPL+RL+WNKQD RYMAT++M S K+V+ Sbjct: 7 QIQNGSEEQSKRSE-IYTYEAPWQIYAMNWSIRRDKKYRLAITSLIEQYPNRVEIVQLDESNGEIRSDPNLCFEHPYPPTKTSFIPDKECQRPD----LLATSSDFLRLWRISDDESRVELKSCLSSDKNSEFSGPITSFDWNEAEPRRIGTSSIDTTCTIWDIEREVVDTQLIAHDKEVYDIAWGGVGVFASVSEDGSVRVFDLRDKEHSTIIYESGEPSTPLVRLSWNKQDPRYMATVIMGSAKIVV 250
BLAST of CN184831 vs. ExPASy Swiss-Prot
Match: DCAF7_MOUSE (DDB1- and CUL4-associated factor 7 OS=Mus musculus GN=Dcaf7 PE=2 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 9.961e-60 Identity = 128/253 (50.59%), Postives = 164/253 (64.82%), Query Frame = 1 Query: 127 HLRSENSVTHESPYPLYAMAVCGQ-----RIAIGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPXXXXXXXXXXXHLLASSGDFLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIE-----------KGVVETQLIAHDKEVYDICWGEA----RVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVI 825 H + + +E+P+ +YAM + R+A+GSF+E+Y N+V +V + ES + FDHPYP TKLM+ P LLA+SGD+LR+W VG++ +LNN+K+S+FCAPLTSFDWNE++P +GT SIDTTCTIW +E G V+TQLIAHDKEVYDI + A +FASV ADGSVR+FDLR EHSTIIYE PQ PLLRL WNKQD Y+AT+ MD +VVI Sbjct: 4 HGKRKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLDEESSEFICRNT--FDHPYPTTKLMWIPDTKGVYPD----LLATSGDYLRVWRVGETETRLECLLNNNKNSDFCAPLTSFDWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQ-HHPLLRLCWNKQDPNYLATMAMDGMEVVI 249
BLAST of CN184831 vs. ExPASy Swiss-Prot
Match: DCAF7_HUMAN (DDB1- and CUL4-associated factor 7 OS=Homo sapiens GN=DCAF7 PE=1 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 9.961e-60 Identity = 128/253 (50.59%), Postives = 164/253 (64.82%), Query Frame = 1 Query: 127 HLRSENSVTHESPYPLYAMAVCGQ-----RIAIGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPXXXXXXXXXXXHLLASSGDFLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIE-----------KGVVETQLIAHDKEVYDICWGEA----RVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVI 825 H + + +E+P+ +YAM + R+A+GSF+E+Y N+V +V + ES + FDHPYP TKLM+ P LLA+SGD+LR+W VG++ +LNN+K+S+FCAPLTSFDWNE++P +GT SIDTTCTIW +E G V+TQLIAHDKEVYDI + A +FASV ADGSVR+FDLR EHSTIIYE PQ PLLRL WNKQD Y+AT+ MD +VVI Sbjct: 4 HGKRKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLDEESSEFICRNT--FDHPYPTTKLMWIPDTKGVYPD----LLATSGDYLRVWRVGETETRLECLLNNNKNSDFCAPLTSFDWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQ-HHPLLRLCWNKQDPNYLATMAMDGMEVVI 249
BLAST of CN184831 vs. ExPASy Swiss-Prot
Match: DCAF7_DICDI (DDB1- and CUL4-associated factor 7 homolog OS=Dictyostelium discoideum GN=wdr68 PE=3 SV=2) HSP 1 Score: 228.409 bits (581), Expect = 3.785e-59 Identity = 125/233 (53.65%), Postives = 160/233 (68.67%), Query Frame = 1 Query: 151 THESPYPLYAMAVCGQ-----RIAIGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPXXXXXXXXXXXHLLASSGDFLRLWDVGDS--SIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWGEAR-VFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVI 825 T+ SP+ +Y ++ + R+AIGSF+EDYTNRVDV+ E+ + F+HPYPPTK M+ P LLA++GD+LRLW+VG + SI+ ++L N SEFCAPL+SFDWNE +P + T SIDTTCTIW+IE G +TQLIAHDKEV+DI + +FASV ADGS+R+FDLR+ EHSTIIYE+P PLLRL WNKQD Y+ATI DS KV+I Sbjct: 8 TYNSPWVIYGLSWSSRVNRPFRLAIGSFLEDYTNRVDVIQLNEETDQFEV--VCGFEHPYPPTKCMWIPDKNSNRPD----LLATTGDYLRLWEVGSNQRSIKLKSLLTNV-ISEFCAPLSSFDWNETDPSLLATSSIDTTCTIWNIETGQAKTQLIAHDKEVFDIAFARGTDLFASVGADGSLRMFDLRNLEHSTIIYETPS-FVPLLRLCWNKQDPNYLATIQQDSPKVII 232
BLAST of CN184831 vs. ExPASy Swiss-Prot
Match: YBE8_SCHPO (Uncharacterized WD repeat-containing protein C17D11.08 OS=Schizosaccharomyces pombe GN=SPBC17D11.08 PE=1 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 4.822e-30 Identity = 91/230 (39.57%), Postives = 118/230 (51.30%), Query Frame = 1 Query: 202 IAIGSFIEDYTNRVDVVSF--EPESLSIKTHPSLSFDHPYPPTKLMFDPXXXXXXXXXXXHLLASSGDFLRLWDVG-----DSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDICW--GEARVFASVSADGSVRIFDLRDKEHSTIIYE---------------SPQPDTPLLRLAWNKQDLRYMATILMDSNKV 819 IA+GS E+ N + ++ + S + D YP TKL+++P LLAS+ LRLW DS + A L+ + APLTSFDW + +P I S+DTTCT+WDI +TQLIAHDKEVYD+ + VF SV ADGSVR+FDLR +HSTIIYE SP PLLRL+ D+ MAT +S+ V Sbjct: 69 IAMGSLNEEPNNMIQLLKLITGDDGNSHLEKAQAATDLEYPVTKLLWNPSSVGSNTDS--QLLASTDQQLRLWKTDFEAGIDSPLLCQASLSTHVKTHNNAPLTSFDWCKTDPSYIVVSSLDTTCTVWDIVAQQSKTQLIAHDKEVYDVAFLKDSINVFVSVGADGSVRMFDLRSLDHSTIIYEGDSTFWKRNGDYTNASPPVSAPLLRLSACDSDVNLMATFHHNSSDV 296
BLAST of CN184831 vs. ExPASy Swiss-Prot
Match: YP247_YEAST (WD repeat-containing protein YPL247C OS=Saccharomyces cerevisiae GN=YPL247C PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.229e-25 Identity = 86/262 (32.82%), Postives = 123/262 (46.95%), Query Frame = 1 Query: 154 HESPYPLYAMA-VCGQRIAIGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPXXXXXXXXXXXHLLASSGDFLRLWDVGDSSIEPVAVLNNS------------------KSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKG-VVETQLIAHDKEVYDICW--GEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPD---------TP-------LLRLAWNKQDLRYMATILMDSNKVVI 825 ++S YPL+ + + +GS+ ED N++ V+ + + D YP +K+ + P LA+ D LR+W V + +N S K P+TSFDWN ++ I + SIDTTC +WD++ V+TQLIAHD EV+D+ + ++FAS DGSVR+FDLR HSTIIYE P TP LLRL + D +AT DSNK++I Sbjct: 125 YQSHYPLFGLDWSADDYVCLGSYKEDSRNKLQVLHSND---LLSWESVVDADVVYPVSKIQWVPSQLYPRK------LATCSDSLRIWSVSPEERQFQEQINLSLCKYNRQHPANPAAADDMKVIGTFPPITSFDWNTVDTNLIISSSIDTTCIVWDLQSSHYVKTQLIAHDSEVFDVRFLTKSTQLFASCGGDGSVRVFDLRSLAHSTIIYEPPSSSVSGATAGTITPSSKGSDALLRLEPSPYDPNVLATFAADSNKIII 377 The following BLAST results are available for this feature:
BLAST of CN184831 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN184831 ID=CN184831; Name=CN184831; organism=Citrus sinensis; type=EST; length=825bpback to top |