CN184830

Overview
NameCN184830
Unique NameCN184830
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length322
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig155 contig Csv1_Contig155:469..789. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN184830 vs. ExPASy Swiss-Prot
Match: GSHRP_SPIOL (Glutathione reductase, chloroplastic (Fragment) OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 6.850e-42
Identity = 76/86 (88.37%), Postives = 78/86 (90.70%), Query Frame = 1
Query:    1 KTSAKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQELAITSDEAFEL 258
            K   KKTDEI+RLN IYKRLLSNAGVKLYEGEGKIVGPNEV+VTQLDGTKLSYSAKHILIATGSRAQR  IPGQELAITSDEA  L
Sbjct:  104 KLLQKKTDEIIRLNNIYKRLLSNAGVKLYEGEGKIVGPNEVQVTQLDGTKLSYSAKHILIATGSRAQRPNIPGQELAITSDEALSL 189          

HSP 2 Score: 44.2838 bits (103), Expect = 6.850e-42
Identity = 20/24 (83.33%), Postives = 22/24 (91.67%), Query Frame = 2
Query:  251 LSLEELPKRAVVLGGGYIAVEFAS 322
            LSLEE PKR V+LGGGYI+VEFAS
Sbjct:  187 LSLEEFPKRVVILGGGYISVEFAS 210          
BLAST of CN184830 vs. ExPASy Swiss-Prot
Match: GSHRC_PEA (Glutathione reductase, cytosolic OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 4.367e-41
Identity = 74/86 (86.05%), Postives = 75/86 (87.21%), Query Frame = 1
Query:    1 KTSAKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQELAITSDEAFEL 258
            K   KKTDEI RLNGIYKRLLSNAGVKL+EGEGKI  PNEVEVTQLDGTKLSYSAKHILIATGSRAQR  IPGQEL ITSDEA  L
Sbjct:  113 KLLQKKTDEINRLNGIYKRLLSNAGVKLFEGEGKIASPNEVEVTQLDGTKLSYSAKHILIATGSRAQRPNIPGQELGITSDEALSL 198          

HSP 2 Score: 46.9802 bits (110), Expect = 4.367e-41
Identity = 22/24 (91.67%), Postives = 23/24 (95.83%), Query Frame = 2
Query:  251 LSLEELPKRAVVLGGGYIAVEFAS 322
            LSLEE PKRAV+LGGGYIAVEFAS
Sbjct:  196 LSLEEFPKRAVILGGGYIAVEFAS 219          
BLAST of CN184830 vs. ExPASy Swiss-Prot
Match: GSHRC_BRARP (Glutathione reductase, cytosolic OS=Brassica rapa subsp. pekinensis GN=GR1 PE=2 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 1.774e-39
Identity = 69/86 (80.23%), Postives = 75/86 (87.21%), Query Frame = 1
Query:    1 KTSAKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQELAITSDEAFEL 258
            K   KKTDEILRLN IYKRLL+NA VKLYEGEG+IVGPNEVEV Q+DGTK+SY+AKHILIATGSRAQ+  IPG ELAITSDEA  L
Sbjct:  117 KLLQKKTDEILRLNNIYKRLLANAAVKLYEGEGRIVGPNEVEVRQIDGTKISYTAKHILIATGSRAQKPNIPGHELAITSDEALSL 202          

HSP 2 Score: 46.9802 bits (110), Expect = 1.774e-39
Identity = 22/24 (91.67%), Postives = 23/24 (95.83%), Query Frame = 2
Query:  251 LSLEELPKRAVVLGGGYIAVEFAS 322
            LSLEE PKRA+VLGGGYIAVEFAS
Sbjct:  200 LSLEEFPKRAIVLGGGYIAVEFAS 223          
BLAST of CN184830 vs. ExPASy Swiss-Prot
Match: GSHRC_ARATH (Glutathione reductase, cytosolic OS=Arabidopsis thaliana GN=At3g24170 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 2.311e-39
Identity = 68/86 (79.07%), Postives = 75/86 (87.21%), Query Frame = 1
Query:    1 KTSAKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQELAITSDEAFEL 258
            K   KKTDEILRLN IYKRLL+NA VKLYEGEG++VGPNEVEV Q+DGTK+SY+AKHILIATGSRAQ+  IPG ELAITSDEA  L
Sbjct:  114 KLLQKKTDEILRLNNIYKRLLANAAVKLYEGEGRVVGPNEVEVRQIDGTKISYTAKHILIATGSRAQKPNIPGHELAITSDEALSL 199          

HSP 2 Score: 46.9802 bits (110), Expect = 2.311e-39
Identity = 22/24 (91.67%), Postives = 23/24 (95.83%), Query Frame = 2
Query:  251 LSLEELPKRAVVLGGGYIAVEFAS 322
            LSLEE PKRA+VLGGGYIAVEFAS
Sbjct:  197 LSLEEFPKRAIVLGGGYIAVEFAS 220          
BLAST of CN184830 vs. ExPASy Swiss-Prot
Match: GSHRC_ORYSJ (Glutathione reductase, cytosolic OS=Oryza sativa subsp. japonica GN=GRC2 PE=2 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 4.252e-31
Identity = 53/81 (65.43%), Postives = 65/81 (80.25%), Query Frame = 1
Query:   16 KTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQELAITSDEAFEL 258
            KT EI+RLNG+Y+R+L N+GV + EG G +V  + VEVT+ DG+K  Y+AKHILIATGSRAQR  IPG+ELAITSDEA  L
Sbjct:  116 KTQEIVRLNGVYQRILGNSGVTMIEGAGSLVDAHTVEVTKPDGSKQRYTAKHILIATGSRAQRVNIPGKELAITSDEALSL 196          

HSP 2 Score: 48.521 bits (114), Expect = 4.252e-31
Identity = 23/24 (95.83%), Postives = 24/24 (100.00%), Query Frame = 2
Query:  251 LSLEELPKRAVVLGGGYIAVEFAS 322
            LSLEELPKRAV+LGGGYIAVEFAS
Sbjct:  194 LSLEELPKRAVILGGGYIAVEFAS 217          
BLAST of CN184830 vs. ExPASy Swiss-Prot
Match: GSHR_PSEAE (Glutathione reductase OS=Pseudomonas aeruginosa GN=gor PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.378e-19
Identity = 45/84 (53.57%), Postives = 57/84 (67.86%), Query Frame = 1
Query:   16 KTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQELAITSDEAFELGRI 267
            K  EI RLNGIY+ LL N+GV L EG  +++  + VEV   DG +  +SAKHIL+ATG   Q   IPG+E AITS+EAF L R+
Sbjct:   87 KNREIQRLNGIYRNLLVNSGVTLLEGHARLLDAHSVEV---DGQR--FSAKHILVATGGWPQVPDIPGKEHAITSNEAFFLERL 165          

HSP 2 Score: 38.891 bits (89), Expect = 3.378e-19
Identity = 17/22 (77.27%), Postives = 20/22 (90.91%), Query Frame = 2
Query:  257 LEELPKRAVVLGGGYIAVEFAS 322
            LE LP+R +V+GGGYIAVEFAS
Sbjct:  162 LERLPRRVLVVGGGYIAVEFAS 183          
BLAST of CN184830 vs. ExPASy Swiss-Prot
Match: GSHRP_SOYBN (Glutathione reductase, chloroplastic OS=Glycine max GN=GR PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.245e-17
Identity = 46/83 (55.42%), Postives = 56/83 (67.47%), Query Frame = 1
Query:   10 AKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQELAITSDEAFEL 258
            A K  E+ RL GIYK +L+NAGVKL EG GK++ P+ V+V      KL YSAKHIL+A G R     IPG+ELAI SD A +L
Sbjct:  157 ANKNAELQRLTGIYKNILNNAGVKLIEGHGKMIDPHTVDV----NGKL-YSAKHILVAVGGRPFIPDIPGKELAIDSDAALDL 234          

HSP 2 Score: 28.8758 bits (63), Expect = 2.245e-17
Identity = 12/23 (52.17%), Postives = 16/23 (69.57%), Query Frame = 2
Query:  251 LSLEELPKRAVVLGGGYIAVEFA 319
            L L   P +  ++GGGYIA+EFA
Sbjct:  232 LDLPTKPVKIAIVGGGYIALEFA 254          
BLAST of CN184830 vs. ExPASy Swiss-Prot
Match: GSHRP_PEA (Glutathione reductase, chloroplastic/mitochondrial OS=Pisum sativum GN=GR PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.378e-16
Identity = 47/83 (56.63%), Postives = 54/83 (65.06%), Query Frame = 1
Query:   10 AKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQELAITSDEAFEL 258
            A K  E+ RL GIYK  L NAGVKL EG GKIV  + V+V   DG KL YSAKHIL++ G R     IPG+E AI SD A +L
Sbjct:  165 ANKNAELQRLTGIYKNTLKNAGVKLIEGRGKIVDAHTVDV---DG-KL-YSAKHILVSVGGRPFIPDIPGKEYAIDSDAALDL 242          

HSP 2 Score: 30.4166 bits (67), Expect = 2.378e-16
Identity = 12/23 (52.17%), Postives = 17/23 (73.91%), Query Frame = 2
Query:  251 LSLEELPKRAVVLGGGYIAVEFA 319
            L L   P++  ++GGGYIA+EFA
Sbjct:  240 LDLPSKPQKIAIVGGGYIALEFA 262          
BLAST of CN184830 vs. ExPASy Swiss-Prot
Match: GSHRP_TOBAC (Glutathione reductase, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GOR PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.818e-16
Identity = 46/83 (55.42%), Postives = 54/83 (65.06%), Query Frame = 1
Query:   10 AKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQELAITSDEAFEL 258
            A K  E+ RL GIYK +L NAGV L EG GK+V P+ V+V   DG KL YSAK+ILI+ G R     IPG E AI SD A +L
Sbjct:  171 ANKNAELQRLTGIYKNILKNAGVTLIEGRGKVVDPHTVDV---DG-KL-YSAKNILISVGGRPFIPDIPGSEYAIDSDAALDL 248          

HSP 2 Score: 29.6462 bits (65), Expect = 8.818e-16
Identity = 12/23 (52.17%), Postives = 16/23 (69.57%), Query Frame = 2
Query:  251 LSLEELPKRAVVLGGGYIAVEFA 319
            L L   P +  ++GGGYIA+EFA
Sbjct:  246 LDLPTKPNKIAIVGGGYIALEFA 268          
BLAST of CN184830 vs. ExPASy Swiss-Prot
Match: GSHR_BURCE (Glutathione reductase OS=Burkholderia cepacia GN=gor PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.497e-15
Identity = 40/83 (48.19%), Postives = 53/83 (63.86%), Query Frame = 1
Query:   10 AKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQELAITSDEAFEL 258
            A K  EI RL G+Y+RL+ NA V++++G  +I GPN V V     T  S SA+ ILIATG+R    P+ G  L ITSD+ F+L
Sbjct:   86 AAKDAEIARLEGVYQRLIENANVEIFKGRAQIAGPNRVTV-----TGASVSARTILIATGARPVMPPVAGANLMITSDDVFDL 163          

HSP 2 Score: 28.4906 bits (62), Expect = 1.497e-15
Identity = 11/17 (64.71%), Postives = 13/17 (76.47%), Query Frame = 2
Query:  269 PKRAVVLGGGYIAVEFA 319
            P R  ++GGGYIA EFA
Sbjct:  167 PPRIAIIGGGYIACEFA 183          
The following BLAST results are available for this feature:
BLAST of CN184830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
GSHRP_SPIOL6.850e-4288.37Glutathione reductase, chloroplastic (Fragment) OS... [more]
GSHRC_PEA4.367e-4186.05Glutathione reductase, cytosolic OS=Pisum sativum ... [more]
GSHRC_BRARP1.774e-3980.23Glutathione reductase, cytosolic OS=Brassica rapa ... [more]
GSHRC_ARATH2.311e-3979.07Glutathione reductase, cytosolic OS=Arabidopsis th... [more]
GSHRC_ORYSJ4.252e-3165.43Glutathione reductase, cytosolic OS=Oryza sativa s... [more]
GSHR_PSEAE3.378e-1953.57Glutathione reductase OS=Pseudomonas aeruginosa GN... [more]
GSHRP_SOYBN2.245e-1755.42Glutathione reductase, chloroplastic OS=Glycine ma... [more]
GSHRP_PEA2.378e-1656.63Glutathione reductase, chloroplastic/mitochondrial... [more]
GSHRP_TOBAC8.818e-1655.42Glutathione reductase, chloroplastic (Fragment) OS... [more]
GSHR_BURCE1.497e-1548.19Glutathione reductase OS=Burkholderia cepacia GN=g... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006D03_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184830 ID=CN184830; Name=CN184830; organism=Citrus sinensis; type=EST; length=322bp
AAAACTTCTGCAAAGAAGACAGATGAGATACTCAGATTAAATGGAATTTA
CAAGCGATTATTATCTAATGCTGGGGTAAAATTATATGAAGGGGAGGGAA
AGATAGTTGGTCCAAATGAAGTTGAGGTCACACAACTAGATGGCACTAAG
TTAAGTTACTCAGCAAAGCACATATTGATCGCAACTGGAAGTAGGGCTCA
ACGTGCTCCTATTCCTGGCCAGGAGCTGGCTATAACCTCTGACGAGGCAT
TTGAGCTTGGAAGAATTACCCAAGCGTGCTGTGGTGCTTGGTGGAGGGTA
CATTGCTGTTGAGTTTGCTTCC
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