CN184829

Overview
NameCN184829
Unique NameCN184829
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length688
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10200 contig Csv1_Contig10200:2095..2782. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN184829 vs. ExPASy Swiss-Prot
Match: SUSY_SOYBN (Sucrose synthase OS=Glycine max GN=SS PE=1 SV=2)

HSP 1 Score: 298.516 bits (763), Expect = 2.159e-80
Identity = 139/158 (87.97%), Postives = 151/158 (95.57%), Query Frame = -3
Query:  213 NRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 686
            NRVRNGELYR ICDT+GAFVQPA+YEAFGLTVVEAMTCGLPTFATC GGPAEIIV+GKSG+HIDPYHG++AA++LVDFFEKCK DP++WDKIS  GL+RIEEKYTW+IYSQRLLTLTGVYGFWKHVSNLDR ESRRYLEMFYALKYRKLAESVPLA E
Sbjct:  648 NRVRNGELYRVICDTRGAFVQPAVYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYHGDRAADLLVDFFEKCKLDPTHWDKISKAGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRRESRRYLEMFYALKYRKLAESVPLAAE 805          
BLAST of CN184829 vs. ExPASy Swiss-Prot
Match: SUSY_VICFA (Sucrose synthase OS=Vicia faba GN=SUCS PE=2 SV=1)

HSP 1 Score: 298.13 bits (762), Expect = 2.819e-80
Identity = 142/159 (89.31%), Postives = 153/159 (96.23%), Query Frame = -3
Query:  210 NRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVEE 686
            NRVRNGELYR ICDTKGAFVQPA+YEAFGLTVVEAM  GLPTFAT  GGPAEIIV+GKSG+HIDPYHG++AA++LV+FFEK KADPS+WDKISLGGL+RIEEKYTW+IYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVEE
Sbjct:  648 NRVRNGELYRVICDTKGAFVQPAVYEAFGLTVVEAMATGLPTFATLNGGPAEIIVHGKSGFHIDPYHGDRAADLLVEFFEKVKADPSHWDKISLGGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVEE 806          
BLAST of CN184829 vs. ExPASy Swiss-Prot
Match: SUS1_ARATH (Sucrose synthase 1 OS=Arabidopsis thaliana GN=SUS1 PE=2 SV=3)

HSP 1 Score: 297.745 bits (761), Expect = 3.682e-80
Identity = 138/159 (86.79%), Postives = 152/159 (95.60%), Query Frame = -3
Query:  210 NRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVEE 686
            +RVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIV+GKSG+HIDPYHG+QAA+ L DFF KCK DPS+WD+IS GGL+RIEEKYTW+IYSQRLLTLTGVYGFWKHVSNLDRLE+RRYLEMFYALKYR LA++VPLA ++
Sbjct:  650 DRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLEARRYLEMFYALKYRPLAQAVPLAQDD 808          
BLAST of CN184829 vs. ExPASy Swiss-Prot
Match: SUSY_PHAAU (Sucrose synthase OS=Phaseolus aureus GN=SS1 PE=1 SV=1)

HSP 1 Score: 293.893 bits (751), Expect = 5.317e-79
Identity = 139/158 (87.97%), Postives = 150/158 (94.94%), Query Frame = -3
Query:  213 NRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 686
            NRVRNGELYR I DTKGAFVQPA+YEAFGLTVVEAMTCGLPTFATC GGPAEIIV+GKSG+HIDPYHG++AA++LV+FFEK K DPS+WDKIS  GL+RIEEKYTW+IYSQRLLTLTGVYGFWKHVSNLDR ESRRYLEMFYALKYRKLAESVPLAVE
Sbjct:  648 NRVRNGELYRVIADTKGAFVQPAVYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYHGDRAADLLVEFFEKVKVDPSHWDKISQAGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRRESRRYLEMFYALKYRKLAESVPLAVE 805          
BLAST of CN184829 vs. ExPASy Swiss-Prot
Match: SUSY_MEDSA (Sucrose synthase OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 293.123 bits (749), Expect = 9.070e-79
Identity = 140/158 (88.61%), Postives = 150/158 (94.94%), Query Frame = -3
Query:  213 NRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 686
            NRVRNGELYR ICDTKGAFVQPA+YEAFGLTVVEAM  GLPTFAT  GGPAEIIV+GKSG+HIDPYHG++AA++LV+FFEK KADPS+WDKIS GGL+RIEEKYTW IYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE
Sbjct:  648 NRVRNGELYRVICDTKGAFVQPAVYEAFGLTVVEAMATGLPTFATLNGGPAEIIVHGKSGFHIDPYHGDRAADLLVEFFEKVKADPSHWDKISQGGLQRIEEKYTWTIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 805          
BLAST of CN184829 vs. ExPASy Swiss-Prot
Match: SUS1_DAUCA (Sucrose synthase isoform 1 OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 290.812 bits (743), Expect = 4.501e-78
Identity = 138/159 (86.79%), Postives = 146/159 (91.82%), Query Frame = -3
Query:  210 NRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVEE 686
            NRVRNGELYRYI DTKGAFVQPA YEAFGLTVVEAMTCGLPTFAT  GGPAEIIV+GKSG+HIDPYHGEQ AE+LV+FFEKCK DPS WD IS GGLKRI+EKYTW+IYS+RLLTL GVYGFWKHVS LDRLE RRYLEMFYALKYRKLAESVPLA +E
Sbjct:  650 NRVRNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATLHGGPAEIIVHGKSGFHIDPYHGEQVAELLVNFFEKCKTDPSQWDAISAGGLKRIQEKYTWQIYSERLLTLAGVYGFWKHVSKLDRLEIRRYLEMFYALKYRKLAESVPLAKDE 808          
BLAST of CN184829 vs. ExPASy Swiss-Prot
Match: SUSY_ALNGL (Sucrose synthase OS=Alnus glutinosa GN=SUS1 PE=2 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 6.500e-77
Identity = 138/159 (86.79%), Postives = 148/159 (93.08%), Query Frame = -3
Query:  213 NRVRNGELYRYICDTKGAFVQ-PALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 686
            NRVRNGELYRYI DTKG     PA+YEAFGLTVVE+MTCGLPTFATCKGGPAEIIV+GKSG+HIDPYHGEQAA++LVDFFEK KADPS+W KISLGGL+RI EKYTWKIYS+RLLTLTGV  FWKHVSNLDRLESRRY+EMFYALKYRKLAESVPLAVE
Sbjct:  645 NRVRNGELYRYIADTKGGLCAGPAIYEAFGLTVVESMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGEQAAQLLVDFFEKTKADPSHWAKISLGGLQRIHEKYTWKIYSERLLTLTGVTAFWKHVSNLDRLESRRYIEMFYALKYRKLAESVPLAVE 803          
BLAST of CN184829 vs. ExPASy Swiss-Prot
Match: SUS1_SOLTU (Sucrose synthase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 1.448e-76
Identity = 134/158 (84.81%), Postives = 145/158 (91.77%), Query Frame = -3
Query:  213 NRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 686
            NRVRNGELYRYI DTKGAFVQPA YEAFGLTVVEAMTCGLPTFAT  GGPAEIIV+GKSG+HIDPYHGEQAA++L DFFEKCK DPS+W+ IS+GGLKRIEEKYTW+IYS+ LLTL  VYGFWKHVS LDRLE RRYLEMFYALKYRK+AE+VPLA E
Sbjct:  648 NRVRNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATNHGGPAEIIVHGKSGFHIDPYHGEQAADLLADFFEKCKKDPSHWETISMGGLKRIEEKYTWQIYSESLLTLAAVYGFWKHVSKLDRLEIRRYLEMFYALKYRKMAEAVPLAAE 805          
BLAST of CN184829 vs. ExPASy Swiss-Prot
Match: SUSY_SOLLC (Sucrose synthase OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 4.213e-76
Identity = 133/158 (84.18%), Postives = 145/158 (91.77%), Query Frame = -3
Query:  213 NRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 686
            NRVRNGELYRYI DTKGAFVQPA YEAFGLTVVEAMTCGLPTFAT  GGPAEIIV+GKSG+HIDPYHGEQAA++L DFFEKCK +PS+W+ IS GGLKRI+EKYTW+IYS+RLLTL  VYGFWKHVS LDRLE RRYLEMFYALKYRK+AE+VPLA E
Sbjct:  648 NRVRNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATNHGGPAEIIVHGKSGFHIDPYHGEQAADLLADFFEKCKKEPSHWETISTGGLKRIQEKYTWQIYSERLLTLAAVYGFWKHVSKLDRLEIRRYLEMFYALKYRKMAEAVPLAAE 805          
BLAST of CN184829 vs. ExPASy Swiss-Prot
Match: SUS1_HORVU (Sucrose synthase 1 OS=Hordeum vulgare GN=SS1 PE=1 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 6.084e-75
Identity = 131/158 (82.91%), Postives = 145/158 (91.77%), Query Frame = -3
Query:  213 NRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 686
            NRVRNGELYRYICDTKGAFVQPA YEAFGLTV+EAMTCGLPT ATC GGPAEIIV+G SG HIDPYH ++AA+ILV+FFEK  ADPSYWDKIS GGLKRI EKYTWK+YS+RL+TLTGVYGFWK+VSNL+R E+RRYLEMFYALKYR LA +VPLAV+
Sbjct:  644 NRVRNGELYRYICDTKGAFVQPAFYEAFGLTVIEAMTCGLPTIATCHGGPAEIIVDGVSGLHIDPYHSDKAADILVNFFEKSTADPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 801          
The following BLAST results are available for this feature:
BLAST of CN184829 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
SUSY_SOYBN2.159e-8087.97Sucrose synthase OS=Glycine max GN=SS PE=1 SV=2[more]
SUSY_VICFA2.819e-8089.31Sucrose synthase OS=Vicia faba GN=SUCS PE=2 SV=1[more]
SUS1_ARATH3.682e-8086.79Sucrose synthase 1 OS=Arabidopsis thaliana GN=SUS1... [more]
SUSY_PHAAU5.317e-7987.97Sucrose synthase OS=Phaseolus aureus GN=SS1 PE=1 S... [more]
SUSY_MEDSA9.070e-7988.61Sucrose synthase OS=Medicago sativa PE=2 SV=1[more]
SUS1_DAUCA4.501e-7886.79Sucrose synthase isoform 1 OS=Daucus carota PE=2 S... [more]
SUSY_ALNGL6.500e-7786.79Sucrose synthase OS=Alnus glutinosa GN=SUS1 PE=2 S... [more]
SUS1_SOLTU1.448e-7684.81Sucrose synthase OS=Solanum tuberosum PE=2 SV=1[more]
SUSY_SOLLC4.213e-7684.18Sucrose synthase OS=Solanum lycopersicum PE=2 SV=1[more]
SUS1_HORVU6.084e-7582.91Sucrose synthase 1 OS=Hordeum vulgare GN=SS1 PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006D02_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184829 ID=CN184829; Name=CN184829; organism=Citrus sinensis; type=EST; length=688bp
GAGGATGGAATTGATGAGGGTGGAACACCCAAAAGTACAAACAATGCTGA
GAAATGCAAAAAGGCAAAAAAAAATTGGAAAAAAGAAAATTTAACGGGGG
GAAAAAAGTCTTTGTCCAATCGCAATCCCGGAAGCGACATTATTCTCCAC
AACTCAAGAAACCTCCACTCGGACCAACCACCCTGAGAGCTTCCCTCAAT
GTCCATTTACTCCTCCACAGCCAGAGGAACAGATTCAGCCAGCTTACGGT
ACTTGAGAGCATAAAACATTTCAAGGTATCGACGGCTCTCAAGACGATCA
AGGTTAGATACATGTTTCCAGAACCCATAGACTCCAGTCAGGGTCAGAAG
CCTCTGAGAGTAAATTTTCCATGTATACTTCTCTTCAATACGCTTCAGGC
CACCCAGTGATATCTTGTCCCAGTATGAGGGATCTGCCTTGCACTTCTCA
AAGAAGTCAACAAGGATCTCAGCAGCCTGCTCACCATGGTAAGGATCAAT
GTGGTAGCCAGATTTCCCGTTAACGATAATCTCAGCGGGGCCACCCTTGC
AAGTTGCAAATGTTGGCAATCCACAGGTCATGGCCTCAACAACAGTCAAG
CCAAAGGCCTCATACAGTGCAGGTTGCACAAAAGCTCCCTTTGTATCACA
AATGTACCGGTACAATTCACCGTTCCTGACCCGATTCA
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