CN184828

Overview
NameCN184828
Unique NameCN184828
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length338
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10200 contig Csv1_Contig10200:153..489. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CN184828 vs. ExPASy Swiss-Prot
Match: SUSY_PHAAU (Sucrose synthase OS=Phaseolus aureus GN=SS1 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.154e-41
Identity = 70/83 (84.34%), Postives = 77/83 (92.77%), Query Frame = 1 
Query:    4 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRKHLTEGAFGEVLRATQEAIVLPPW 252
            MA   LTRVHSLRERLDETLSA+RNEILALLSRIEGKGKGILQ+HQ+IAEFE I EE+R+ LT+GAFGEVLR+TQEAIVLPPW
Sbjct:    1 MATDRLTRVHSLRERLDETLSANRNEILALLSRIEGKGKGILQHHQVIAEFEEIPEESRQKLTDGAFGEVLRSTQEAIVLPPW 83

HSP 2 Score: 50.0618 bits (118), Expect = 2.154e-41
Identity = 22/23 (95.65%), Postives = 23/23 (100.00%), Query Frame = 2 
Query:  254 VALAVRPRPGVWEYIRVNVHALV 322
            VALAVRPRPGVWEY+RVNVHALV
Sbjct:   84 VALAVRPRPGVWEYLRVNVHALV 106
[Close]
BLAST of CN184828 vs. ExPASy Swiss-Prot
Match: SUSY_VICFA (Sucrose synthase OS=Vicia faba GN=SUCS PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.657e-41
Identity = 69/83 (83.13%), Postives = 76/83 (91.57%), Query Frame = 1 
Query:    4 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRKHLTEGAFGEVLRATQEAIVLPPW 252
            MA   LTRVHSLRERLDETL+A+RNEILALLSRIE KGKGILQ+HQ+IAEFE I EENR+ LT+GAFGEVLR+TQEAIVLPPW
Sbjct:    1 MATERLTRVHSLRERLDETLTANRNEILALLSRIEAKGKGILQHHQVIAEFEEIPEENRQKLTDGAFGEVLRSTQEAIVLPPW 83

HSP 2 Score: 50.0618 bits (118), Expect = 3.657e-41
Identity = 22/23 (95.65%), Postives = 23/23 (100.00%), Query Frame = 2 
Query:  254 VALAVRPRPGVWEYIRVNVHALV 322
            VALAVRPRPGVWEY+RVNVHALV
Sbjct:   84 VALAVRPRPGVWEYLRVNVHALV 106
[Close]
BLAST of CN184828 vs. ExPASy Swiss-Prot
Match: SUSY_SOYBN (Sucrose synthase OS=Glycine max GN=SS PE=1 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 6.209e-41
Identity = 69/83 (83.13%), Postives = 76/83 (91.57%), Query Frame = 1 
Query:    4 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRKHLTEGAFGEVLRATQEAIVLPPW 252
            MA   LTRVHSLRERLDETL+A+RNEILALLSRIE KGKGILQ+HQ+IAEFE I EENR+ LT+GAFGEVLR+TQEAIVLPPW
Sbjct:    1 MATDRLTRVHSLRERLDETLTANRNEILALLSRIEAKGKGILQHHQVIAEFEEIPEENRQKLTDGAFGEVLRSTQEAIVLPPW 83

HSP 2 Score: 50.0618 bits (118), Expect = 6.209e-41
Identity = 22/23 (95.65%), Postives = 23/23 (100.00%), Query Frame = 2 
Query:  254 VALAVRPRPGVWEYIRVNVHALV 322
            VALAVRPRPGVWEY+RVNVHALV
Sbjct:   84 VALAVRPRPGVWEYLRVNVHALV 106
[Close]
BLAST of CN184828 vs. ExPASy Swiss-Prot
Match: SUSY_MEDSA (Sucrose synthase OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 6.718e-40
Identity = 66/83 (79.52%), Postives = 76/83 (91.57%), Query Frame = 1 
Query:    4 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRKHLTEGAFGEVLRATQEAIVLPPW 252
            MA   LTRVHSL+ERLDETL+A+RNEILALLSR+E KGKGILQ+HQ+IAEFE I EE+R+ LT+GAFGEVLR+TQEAIVLPPW
Sbjct:    1 MATERLTRVHSLKERLDETLTANRNEILALLSRLEAKGKGILQHHQVIAEFEEIPEESRQKLTDGAFGEVLRSTQEAIVLPPW 83

HSP 2 Score: 49.6766 bits (117), Expect = 6.718e-40
Identity = 21/23 (91.30%), Postives = 23/23 (100.00%), Query Frame = 2 
Query:  254 VALAVRPRPGVWEYIRVNVHALV 322
            VALAVRPRPG+WEY+RVNVHALV
Sbjct:   84 VALAVRPRPGIWEYLRVNVHALV 106
[Close]
BLAST of CN184828 vs. ExPASy Swiss-Prot
Match: SUSY_ALNGL (Sucrose synthase OS=Alnus glutinosa GN=SUS1 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 7.265e-39
Identity = 66/83 (79.52%), Postives = 72/83 (86.75%), Query Frame = 1 
Query:    4 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRKHLTEGAFGEVLRATQEAIVLPPW 252
            MAER LTRVHSLRERLDETL A+RNEI+ALLSRI GKGKGI +NHQLIAE E+I E  RK L +GAFGEVLR+ QEAIVLPPW
Sbjct:    1 MAERVLTRVHSLRERLDETLVANRNEIVALLSRIIGKGKGICRNHQLIAEVEAIPEATRKKLLDGAFGEVLRSAQEAIVLPPW 83

HSP 2 Score: 50.8322 bits (120), Expect = 7.265e-39
Identity = 23/23 (100.00%), Postives = 23/23 (100.00%), Query Frame = 2 
Query:  254 VALAVRPRPGVWEYIRVNVHALV 322
            VALAVRPRPGVWEYIRVNVHALV
Sbjct:   84 VALAVRPRPGVWEYIRVNVHALV 106
[Close]
BLAST of CN184828 vs. ExPASy Swiss-Prot
Match: SUS2_SOLTU (Sucrose synthase OS=Solanum tuberosum PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.845e-34
Identity = 61/83 (73.49%), Postives = 70/83 (84.34%), Query Frame = 1 
Query:    4 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRKHLTEGAFGEVLRATQEAIVLPPW 252
            MAER LTRVHSLRERLD TL+AHRNEIL  LSRIE  GKGIL+ HQL+AEFESI +E++  L + AF EVL++TQEAIVLPPW
Sbjct:    1 MAERVLTRVHSLRERLDATLAAHRNEILLFLSRIESHGKGILKPHQLLAEFESIHKEDKDKLNDHAFEEVLKSTQEAIVLPPW 83

HSP 2 Score: 43.1282 bits (100), Expect = 2.845e-34
Identity = 18/23 (78.26%), Postives = 22/23 (95.65%), Query Frame = 2 
Query:  254 VALAVRPRPGVWEYIRVNVHALV 322
            VALA+R RPGVWEY+RVNV+AL+
Sbjct:   84 VALAIRLRPGVWEYVRVNVNALI 106
[Close]
BLAST of CN184828 vs. ExPASy Swiss-Prot
Match: SUS1_ARATH (Sucrose synthase 1 OS=Arabidopsis thaliana GN=SUS1 PE=2 SV=3)

HSP 1 Score: 114.005 bits (284), Expect = 1.066e-33
Identity = 55/82 (67.07%), Postives = 69/82 (84.15%), Query Frame = 1 
Query:    7 AERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRKHLTEGAFGEVLRATQEAIVLPPW 252
            AER +TRVHS RERL+ETL + RNE+LALLSR+E KGKGILQ +Q+IAEFE++ E+ RK L  G F ++L++TQEAIVLPPW
Sbjct:    4 AERMITRVHSQRERLNETLVSERNEVLALLSRVEAKGKGILQQNQIIAEFEALPEQTRKKLEGGPFFDLLKSTQEAIVLPPW 85

HSP 2 Score: 48.9062 bits (115), Expect = 1.066e-33
Identity = 21/23 (91.30%), Postives = 23/23 (100.00%), Query Frame = 2 
Query:  254 VALAVRPRPGVWEYIRVNVHALV 322
            VALAVRPRPGVWEY+RVN+HALV
Sbjct:   86 VALAVRPRPGVWEYLRVNLHALV 108
[Close]
BLAST of CN184828 vs. ExPASy Swiss-Prot
Match: SUS1_SOLTU (Sucrose synthase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 5.202e-33
Identity = 56/83 (67.47%), Postives = 70/83 (84.34%), Query Frame = 1 
Query:    4 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRKHLTEGAFGEVLRATQEAIVLPPW 252
            MAER LTRVHSLRER+D TL+AHRNEIL  LSRIE  GKGIL+ H+L+AEF++I ++++  L E AF E+L++TQEAIVLPPW
Sbjct:    1 MAERVLTRVHSLRERVDATLAAHRNEILLFLSRIESHGKGILKPHELLAEFDAIRQDDKNKLNEHAFEELLKSTQEAIVLPPW 83

HSP 2 Score: 43.8986 bits (102), Expect = 5.202e-33
Identity = 20/23 (86.96%), Postives = 22/23 (95.65%), Query Frame = 2 
Query:  254 VALAVRPRPGVWEYIRVNVHALV 322
            VALA+R RPGVWEYIRVNV+ALV
Sbjct:   84 VALAIRLRPGVWEYIRVNVNALV 106
[Close]
BLAST of CN184828 vs. ExPASy Swiss-Prot
Match: SUSY_SOLLC (Sucrose synthase OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 5.605e-32
Identity = 55/83 (66.27%), Postives = 68/83 (81.93%), Query Frame = 1 
Query:    4 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRKHLTEGAFGEVLRATQEAIVLPPW 252
            MAER LTRVH LRER+D TL AHRNEIL  LSRIE  GKGIL+ H+L+AEF++I ++++  L E AF E+L++TQEAIVLPPW
Sbjct:    1 MAERVLTRVHRLRERVDATLCAHRNEILLFLSRIESHGKGILKPHELLAEFDAIRQDDKDKLNEHAFEELLKSTQEAIVLPPW 83

HSP 2 Score: 43.5134 bits (101), Expect = 5.605e-32
Identity = 19/23 (82.61%), Postives = 22/23 (95.65%), Query Frame = 2 
Query:  254 VALAVRPRPGVWEYIRVNVHALV 322
            VALA+R RPGVWEY+RVNV+ALV
Sbjct:   84 VALAIRLRPGVWEYVRVNVNALV 106
[Close]
BLAST of CN184828 vs. ExPASy Swiss-Prot
Match: SUS1_DAUCA (Sucrose synthase isoform 1 OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 7.857e-31
Identity = 55/85 (64.71%), Postives = 68/85 (80.00%), Query Frame = 1 
Query:    4 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRKHLTE--GAFGEVLRATQEAIVLPPW 252
            M E  LTRVHSLRER+D TL+ HRNEIL  LSRIE  GKGIL+ HQL+AE+E+IS+E++  L +  GAF EV+++TQEAIV PPW
Sbjct:    1 MGEPVLTRVHSLRERMDSTLANHRNEILMFLSRIESHGKGILKPHQLLAEYEAISKEDKLKLDDGHGAFAEVIKSTQEAIVSPPW 85

HSP 2 Score: 43.8986 bits (102), Expect = 7.857e-31
Identity = 19/23 (82.61%), Postives = 21/23 (91.30%), Query Frame = 2 
Query:  254 VALAVRPRPGVWEYIRVNVHALV 322
            VALA+R RPGVWEY+RVNVH LV
Sbjct:   86 VALAIRLRPGVWEYVRVNVHHLV 108
The following BLAST results are available for this feature:
BLAST of CN184828 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
SUSY_PHAAU2.154e-4184.34Sucrose synthase OS=Phaseolus aureus GN=SS1 PE=1 S... [more]
SUSY_VICFA3.657e-4183.13Sucrose synthase OS=Vicia faba GN=SUCS PE=2 SV=1[more]
SUSY_SOYBN6.209e-4183.13Sucrose synthase OS=Glycine max GN=SS PE=1 SV=2[more]
SUSY_MEDSA6.718e-4079.52Sucrose synthase OS=Medicago sativa PE=2 SV=1[more]
SUSY_ALNGL7.265e-3979.52Sucrose synthase OS=Alnus glutinosa GN=SUS1 PE=2 S... [more]
SUS2_SOLTU2.845e-3473.49Sucrose synthase OS=Solanum tuberosum PE=3 SV=1[more]
SUS1_ARATH1.066e-3367.07Sucrose synthase 1 OS=Arabidopsis thaliana GN=SUS1... [more]
SUS1_SOLTU5.202e-3367.47Sucrose synthase OS=Solanum tuberosum PE=2 SV=1[more]
SUSY_SOLLC5.605e-3266.27Sucrose synthase OS=Solanum lycopersicum PE=2 SV=1[more]
SUS1_DAUCA7.857e-3164.71Sucrose synthase isoform 1 OS=Daucus carota PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006D02_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184828 ID=CN184828; Name=CN184828; organism=Citrus sinensis; type=EST; length=338bp
TCAATGGCCGAACGTGCTTTGACCCGCGTTCACAGTCTCCGCGAGCGTTT
GGATGAGACTCTCTCTGCCCACAGGAATGAAATCTTGGCCCTTTTGTCAA
GGATTGAGGGCAAGGGCAAGGGAATCTTGCAAAACCATCAACTTATTGCT
GAGTTTGAATCAATTTCTGAGGAAAACAGAAAGCATCTAACTGAGGGGGC
ATTTGGTGAAGTTCTAAGAGCCACCCAGGAAGCAATTGTTTTGCCTCCGT
GGGGTAGCGCTTGCCGTGCGTCCAAGGCCCGGTGTGTGGGAGTACATCCG
AGTGAATGTCCATGCCCTTGTCCGTTGAAGGAGCTGCT
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