CN184821

Overview
NameCN184821
Unique NameCN184821
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length715
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9802 contig Csv1_Contig9802:393..1110. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN184821 vs. ExPASy Swiss-Prot
Match: CHI2_PEA (Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=2)

HSP 1 Score: 246.514 bits (628), Expect = 1.045e-64
Identity = 111/185 (60.00%), Postives = 136/185 (73.51%), Query Frame = -2
Query:  160 HETMGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXPLPG-QYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLDCYNQGPYGPNLMAQSM 711
            HET GGWP AP G YAWGYC++R+ +  +            G QYYGRGPIQ++WN NY +CG A+GVDLLNNPDL+ATDPV+SFK+A+WFWMT Q PKPSCH+VI   W PS+ D  A RLPGYG  TNIINGG+ECG+G +S V +RIGF+  +C  FGI  GDNLDCY+Q P+G +L   S+
Sbjct:  132 HETTGGWPTAPDGPYAWGYCFLREQNPSTYCQASSEFPCASGKQYYGRGPIQISWNYNYGQCGRAIGVDLLNNPDLVATDPVISFKTALWFWMTPQSPKPSCHDVITGGWTPSSADRAAGRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFYKRYCDIFGIGYGDNLDCYSQRPFGSSLPLSSI 316          
BLAST of CN184821 vs. ExPASy Swiss-Prot
Match: CHIT_PHAVU (Endochitinase OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 4.392e-63
Identity = 109/188 (57.98%), Postives = 136/188 (72.34%), Query Frame = -2
Query:  151 HETMGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXPLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLDCYNQGPYGPNLMAQSM*SS 711
            HET GGW  AP G YAWGYC++R+ +  +           PGQ YYGRGPIQ++WN NY +CG A+GVDLLN PDL+ATD V+SFKSA+WFWMTAQ PKPS H+VI   W PS+ DV A RLPGYG  TNIINGG+ECG+G +S V +RIGFF  +C   G+  G+NLDCY+Q P+G +L+   + +S
Sbjct:  140 HETTGGWATAPDGPYAWGYCFVRERNPSTYCSATPQFPCAPGQQYYGRGPIQISWNYNYGQCGRAIGVDLLNKPDLVATDSVISFKSALWFWMTAQSPKPSSHDVITSRWTPSSADVAARRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFFKRYCDLLGVGYGNNLDCYSQTPFGNSLLLSDLVTS 327          
BLAST of CN184821 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2)

HSP 1 Score: 240.736 bits (613), Expect = 5.736e-63
Identity = 111/186 (59.68%), Postives = 136/186 (73.12%), Query Frame = -2
Query:  160 HETMGGWPDAPGGEYAWGYCYIR-QVSHGSDXXXXXXXXPLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLDCYNQGPYGPNLMAQSM 711
            HET GGW  AP G YAWGYC++R Q S G            PG+ Y+GRGPIQ++ N NY  CG A+GVDLLNNPDL+ATDPV+SFKSA+WFWMT Q PKPSCH+VII  W+PSA D  A+RLPG+G+ TNIINGG+ECG+G +S V +RIGF+  +C   G+ PGDNLDC NQ  +G  L+  +M
Sbjct:  144 HETTGGWATAPDGPYAWGYCWLREQGSPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSALWFWMTPQSPKPSCHDVIIGRWQPSAGDRAANRLPGFGVITNIINGGLECGRGTDSRVQDRIGFYRRYCSILGVSPGDNLDCGNQRSFGNGLLVDTM 329          
BLAST of CN184821 vs. ExPASy Swiss-Prot
Match: CHI5_PHAVU (Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 7.491e-63
Identity = 109/188 (57.98%), Postives = 135/188 (71.81%), Query Frame = -2
Query:  151 HETMGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXPLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLDCYNQGPYGPNLMAQSM*SS 711
            HET GGW  AP G YAWGYC++R+ +  +           PGQ YYGRGPIQ++WN NY +CG A+GVDLLN PDL+ATD V+SFKSA+WFWMTAQ PKPS H+VI   W PS+ DV A RLPGYG  TNIINGG+ECG+G +S V +RIGFF  +C   G+  G+NLDCY+Q P+G +L    + +S
Sbjct:  139 HETTGGWATAPDGPYAWGYCFVRERNPSAYCSATPQFPCAPGQQYYGRGPIQISWNYNYGQCGRAIGVDLLNKPDLVATDSVISFKSALWFWMTAQSPKPSSHDVITSRWTPSSADVAARRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFFKRYCDLLGVGYGNNLDCYSQTPFGNSLFLSDLVTS 326          
BLAST of CN184821 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 9.784e-63
Identity = 108/178 (60.67%), Postives = 134/178 (75.28%), Query Frame = -2
Query:  184 HETMGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXPL-PGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLDCYNQGPYG 711
            HET GGWP AP G YAWGYC++++ +  S+        P  PG+ YYGRGP+QL+WN NY  CGEAL V+LL NPDL+ATD VLSFK+A+WFWMT Q PKPSCH+V+   W+PSA D  A RLPGYG+ TN++NGG+ECGKG N  VA+R+GFF  +CG  G+  G+NLDCYNQ P+G
Sbjct:   66 HETTGGWPSAPDGPYAWGYCFLKERNPSSNYCAPSPRYPCAPGKSYYGRGPLQLSWNYNYGPCGEALRVNLLGNPDLVATDRVLSFKTALWFWMTPQAPKPSCHDVLTGRWQPSAADTAAGRLPGYGVLTNLLNGGLECGKGPNPQVADRLGFFRRYCGLLGVGTGNNLDCYNQRPFG 243          
BLAST of CN184821 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 2.180e-62
Identity = 110/186 (59.14%), Postives = 136/186 (73.12%), Query Frame = -2
Query:  160 HETMGGWPDAPGGEYAWGYCYIR-QVSHGSDXXXXXXXXPLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLDCYNQGPYGPNLMAQSM 711
            HET GGW  AP G YAWGYC++R Q S G            PG+ Y+GRGPIQ++ N NY  CG A+GVDLLNNPDL+ATDPV+SFKSA+WFWMT Q PKPSCH+VII  W+PS+ D  A+RLPG+G+ TNIINGG+ECG+G +S V +RIGF+  +C   G+ PGDNLDC NQ  +G  L+  +M
Sbjct:  139 HETTGGWATAPDGPYAWGYCWLREQGSPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSALWFWMTPQSPKPSCHDVIIGRWQPSSADRAANRLPGFGVITNIINGGLECGRGTDSRVQDRIGFYRRYCSILGVSPGDNLDCGNQRSFGNGLLVDTM 324          
BLAST of CN184821 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 2.180e-62
Identity = 112/188 (59.57%), Postives = 136/188 (72.34%), Query Frame = -2
Query:  160 HETMGG--WPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXPL-PG-QYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLDCYNQGPYGPNLMAQSM 711
            HET GG  W  AP G YAWGYCY R+++  S         P  PG QY+GRGP+QL+WN NY +CG A+GVDLLNNPDLL++DP +SFKSA WFWMT Q PKPSCH VII  W PS++D  A R+PGYG+ TNIINGG+ECGKGWN+ V +RIGF+  +C   G+  G+NLDCYNQ P+G  +   SM
Sbjct:  138 HETTGGAGWA-APDGPYAWGYCYNRELNPPSSYCASDPNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTPQSPKPSCHNVIIGAWSPSSSDRAAGRVPGYGVITNIINGGLECGKGWNAQVEDRIGFYKRYCDILGVSYGNNLDCYNQSPFGNGVSVDSM 324          
BLAST of CN184821 vs. ExPASy Swiss-Prot
Match: CHIC_SOLLC (Basic 30 kDa endochitinase OS=Solanum lycopersicum GN=CHI9 PE=1 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 3.718e-62
Identity = 110/186 (59.14%), Postives = 134/186 (72.04%), Query Frame = -2
Query:  160 HETMGGWPDAPGGEYAWGYCYIR-QVSHGSDXXXXXXXXPLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLDCYNQGPYGPNLMAQSM 711
            HET GGWP AP G YAWGYC++R Q S G            PG+ Y+GRGPIQ++ N NY  CG A+GVDLLNNPDL+ATDPV+SFKSAIWFWMT Q PKPSCH+VI   W+PS  D  A+R+PG+G+ TNIINGG+ECG G +S V +RIGF+  +CG  G+ PG+NLDC NQ  +G  L+   M
Sbjct:  137 HETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGENLDCGNQRSFGNGLLVDIM 322          
BLAST of CN184821 vs. ExPASy Swiss-Prot
Match: CHI1_SOLTU (Endochitinase 1 (Fragment) OS=Solanum tuberosum GN=CHTB1 PE=2 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 6.342e-62
Identity = 110/186 (59.14%), Postives = 134/186 (72.04%), Query Frame = -2
Query:  160 HETMGGWPDAPGGEYAWGYCYIR-QVSHGSDXXXXXXXXPLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLDCYNQGPYGPNLMAQSM 711
            HET GGWP AP G YAWGYC++R Q S G            PG+ Y+GRGPIQ++ N NY  CG A+GVDLLNNPDL+ATD V+SFKSAIWFWMT Q PKPSCH+VI   W+PS  D  A+R+PG+G+ TNIINGG+ECG G +S V +RIGF+  +CG  G+ PGDNLDC NQ  +G  L+  +M
Sbjct:  133 HETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGVDQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDCGNQRSFGNGLLVDTM 318          
BLAST of CN184821 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 8.283e-62
Identity = 110/187 (58.82%), Postives = 130/187 (69.52%), Query Frame = -2
Query:  160 HETMGG--WPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXPLPG-QYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNIINGGIECGKGWNSFVANRIGFFTTFCGKFGIQPGDNLDCYNQGPYGPNLMAQSM 711
            HET GG  W  AP G Y WGYCY R+++              PG QY+GRGP+QLTWN NY +CG A+GVDLLNNPDLLATDP +SFKSA WFWMT Q PKPSCH+VII  W PS +D  A R+PG+GL TNIINGG+ECG+GWN+ V +RIGF+  +C   G+  G+NLDCYNQ  Y       SM
Sbjct:  136 HETTGGAGWA-APDGPYTWGYCYNRELNPADYCQWDPNYPCAPGKQYFGRGPMQLTWNYNYGQCGRAIGVDLLNNPDLLATDPTISFKSAFWFWMTPQSPKPSCHDVIIGAWSPSGSDQAAGRVPGFGLITNIINGGLECGQGWNAKVEDRIGFYKRYCDTLGVGYGNNLDCYNQRSYNNGPSVDSM 321          
The following BLAST results are available for this feature:
BLAST of CN184821 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
CHI2_PEA1.045e-6460.00Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=... [more]
CHIT_PHAVU4.392e-6357.98Endochitinase OS=Phaseolus vulgaris PE=1 SV=1[more]
CHI1_TOBAC5.736e-6359.68Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1... [more]
CHI5_PHAVU7.491e-6357.98Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1[more]
CHIT_CARPA9.784e-6360.67Endochitinase OS=Carica papaya PE=1 SV=1[more]
CHI2_TOBAC2.180e-6259.14Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1... [more]
CHI1_GOSHI2.180e-6259.57Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1[more]
CHIC_SOLLC3.718e-6259.14Basic 30 kDa endochitinase OS=Solanum lycopersicum... [more]
CHI1_SOLTU6.342e-6259.14Endochitinase 1 (Fragment) OS=Solanum tuberosum GN... [more]
CHI1_THECC8.283e-6258.82Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006C20_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006C20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184821 ID=CN184821; Name=CN184821; organism=Citrus sinensis; type=EST; length=715bp
GAGGATTGATCCATGTTGGATCAGTCTTATTTAATTTACCTACAATAAGA
GCGTAACAAACTAACAATTTAGTTGTCCACCTACAAGTGTGACATCTAAA
GTTTTTATTAAGTAGCTTTTATTAAGCTTATTTTACTAAAACGTTGATCA
TGATGATCACATAGATTGTGCCATCAAATTAGGGCCATAAGGCCCTTGGT
TGTAGCAATCAAGATTGTCGCCAGGCTGAATCCCAAACTTGCCACAGAAA
GTGGTAAAGAACCCAATACGGTTAGCTACAAAGCTATTCCAACCTTTGCC
ACATTCAATTCCACCGTTGATTATATTTGTGGTTAGACCGTATCCCGGAA
GCCGGCTGGCGTTTACGTCATTTGCTGATGGTTTCCATTCGTCGATAATG
ACTTCGTGGCACGATGGCTTTGGTGGCTGTGCAGTCATCCAGAACCAGAT
TGCTGACTTGAATGATAGTACTGGATCAGTGGCAAGAAGGTCTGGATTGT
TCAACAAGTCCACCCCCAAGGCTTCTCCGCACCTTAAGTAATTGCAATTC
CAAGTGAGTTGAATTGGACCTCGGCCATAGTATTGCCCTGGCAAGGGACA
TGGACAGTAAGGATAACAGTAGTCGGACCCATGGCTAACTTGCCTAATAT
AGCAATATCCCCAAGCATATTCTCCACCAGGTGCATCGGGCCATCCCCCC
ATAGTTTCATGGCCA
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