CN184812

Overview
NameCN184812
Unique NameCN184812
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length813
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6947 contig Csv1_Contig6947:1258..2070. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CN184812 vs. ExPASy Swiss-Prot
Match: ASPL1_ARATH (Aspartic proteinase-like protein 1 OS=Arabidopsis thaliana GN=At5g10080 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 8.226e-35
Identity = 76/155 (49.03%), Postives = 104/155 (67.10%), Query Frame = -2 
Query:  354 VDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSFPENEGFTVFCLTVMSTDGDYGI--IGQNFMMGHRMVFDRENLKLAWSHSKCEEVIDKSHVHLVPPPAGQSPNPLPTTEQQS 812
            +DSG SFT+LP EIY +V ++ D+ +++   + +G SW+YCY +S+E   KVP ++L FS N +FV+   +F F +++G   FCL + S  G  GI  IGQN+M G+RMVFDREN+KL WS SKC+E  DK       P +  SPNPLPT EQQS
Sbjct:  332 IDSGQSFTYLPEEIYRKVALEIDRHINATSKNFEGVSWEYCYESSAEP--KVPAIKLKFSHNNTFVIHKPLFVFQQSQGLVQFCLPI-SPSGQEGIGSIGQNYMRGYRMVFDRENMKLGWSPSKCQE--DKIEPPQASPGSTSSPNPLPTDEQQS 481
The following BLAST results are available for this feature:
BLAST of CN184812 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ASPL1_ARATH8.226e-3549.03Aspartic proteinase-like protein 1 OS=Arabidopsis ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_0006C11_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184812 ID=CN184812; Name=CN184812; organism=Citrus sinensis; type=EST; length=813bp
TTTTTTTTTTTTTTTTTGAATGGAATTAGCCTTAAAAATAATGCATTAAT
AAAAACATAAATGAACCAAAAGTTGACATGCCCATAAAGAAATCTTCCAC
CAACCCCAATCAATACAAATGGCCTAATAGAAAAACTGAGCTGTTTTGTA
AGATGGGAGAGGTTGACAAGAATAGACAACAGATTTACAAGTGCGGGTGA
GGACTAATCGGATGATAGGAGCAAACACATTAACACAAGCAATGAACATG
CTACACGAAGAACAGAGTCAAGTTGCTGGGCTGAGGCTGCAATGGACTTG
GACGGAGCCGTTTTTGCAGTAGAAGGTGGTGCAGCTGCCTGTCCATTACT
GGTGCTCTGTTGCTCTGTCGTTGGCAATGGGTTTGGAGATTGACCGGCAG
GTGGTGGCACAAGGTGCACATGTGACTTGTCGATCACTTCTTCACATTTG
GAATGTGACCAAGCCAATTTCAAATTTTCCCTATCAAAGACCATGCGGTG
ACCCATCATGAAGTTTTGTCCAATGATACCATAGTCTCCATCCGTAGACA
TCACAGTTAAACAGAATACAGTAAATCCCTCATTTTCAGGAAATGAAAAT
ATGTGATTACGGACTACAAAGCTTTGGTTTTTAGAAAATATAAGTCTCAT
ATCAGGAACTTTAAGCATCTCCTCTGAACTGGCATTATAGCAGTACTTCC
AGGAATTTCCTTGGAGGCTAATCCTTTTAGAACTCACAAGTTTGTCAAAC
TTCACAACAACTTCAGCATAAATTTCTGTTGGAAGAAAAGTGAAAGATGC
ACCACTGTCAACT
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