CN184809

Overview
NameCN184809
Unique NameCN184809
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length761
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6952 contig Csv1_Contig6952:352..1112. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN184809 vs. ExPASy Swiss-Prot
Match: G2OX8_ARATH (Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=2)

HSP 1 Score: 255.758 bits (652), Expect = 1.931e-67
Identity = 131/230 (56.96%), Postives = 163/230 (70.87%), Query Frame = 1
Query:   97 DPPFHQAYKSLI--------EDTSNNIFGKKLV-LVEECELPLIDLSRILHNDNVVDESEREECKEEIARASQQWGFFQVTNHGISKDLLEKMREEQVKVFKQPFDKKSKEDKFMNFPAGSYRWGTPSATCLNQLSWSEAFHIPMADIXXXXXXXXXXXXXXEQFATTVAGLARKLTAILAEKLGRESTFFQENCLPSTCYLRMNRYPPCPVPSAIHGLMPHTDSDFLTI 759
            DPPF++ Y +L+         D S   F   +  +VEE ELP+ID+SR++       E ERE+CKE IARAS++WGFFQV NHGIS D+LEKMR+EQ++VF++PFDKKSK +KF    AGSYRWGTPSAT + QLSWSEAFH+PM DI              E+FA+    LA  L  +LAEK G+ S+FF+ENC+ +TCYLRMNRYPPCP PS ++GLMPHTDSDFLTI
Sbjct:    2 DPPFNEIYNNLLYNQITKKDNDVSEIPFSFSVTAVVEEVELPVIDVSRLIDGA----EEEREKCKEAIARASREWGFFQVINHGISMDVLEKMRQEQIRVFREPFDKKSKSEKFS---AGSYRWGTPSATSIRQLSWSEAFHVPMTDISDNKDFTTLSSTM-EKFASESEALAYMLAEVLAEKSGQNSSFFKENCVRNTCYLRMNRYPPCPKPSEVYGLMPHTDSDFLTI 223          
BLAST of CN184809 vs. ExPASy Swiss-Prot
Match: G2OX7_ARATH (Gibberellin 2-beta-dioxygenase 7 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.677e-34
Identity = 80/229 (34.93%), Postives = 124/229 (54.15%), Query Frame = 1
Query:   88 MATDPPFHQAYKSLI-----EDTSNNIFGKKLVLVEECELPLIDLSRILHNDNVVDESEREECKEEIARASQQWGFFQVTNHGISKDLLEKMREEQVKVFKQPFDKKSKEDKFMNFPAGSYRWGTPSATCLNQLSWSEAFHIPMADIXXXXXXXXXXXXXXEQFATTVAGLARKLTAILAEKLGRESTFFQENCLPSTCYLRMNRYPPCPVPSAIHGLMPHTDSDFLTI 759
            MA+ PPF   + S+        TS +      +     +LP+IDLS +   + V    +R+ C +++  A+++WGFFQ+ NHGI KD+ E M  E+ K+F QPF  K +E +F +    SYRWG PSAT   Q S SEAFHI ++++              E +   +A +A+ +  IL +++   S +F+        +LR+N+Y P    S + GL+PHTD+ FLTI
Sbjct:    1 MASQPPFKTNFCSIFGSSFPNSTSESNTNTSTIQTSGIKLPVIDLSHLTSGEEV----KRKRCVKQMVAAAKEWGFFQIVNHGIPKDVFEMMLLEEKKLFDQPFSVKVRE-RFSDLSKNSYRWGNPSATSPAQYSVSEAFHIILSEVSRISDDRNNLRTIVETYVQEIARVAQMICEILGKQVNVSSEYFENIFELENSFLRLNKYHPSVFGSEVFGLVPHTDTSFLTI 224          
BLAST of CN184809 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSJ (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. japonica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.552e-16
Identity = 51/181 (28.18%), Postives = 88/181 (48.62%), Query Frame = 1
Query:  223 NDNVVDESEREECKEEIARASQQWGFFQVTNHGISKDLLEKMREEQVKVFKQPFDKKSKEDKFMNFPAGSYRWGTPSATCLNQLSWSEAF---HIPMADIXXXXXXXXXXXXXXEQFATTVAGLARKLTAILAEKLGRESTF----FQENCLPSTCYLRMNRYPPCPVPSAIHGLMPHTDS 744
            N  ++   ER    E++  A + WGFF++ NHGIS +L++++     K+ K  + K+ +E +F+ F + + + G        +L W   F   H+P ++I              ++FA  +  LA +L  +L E LG E  +    F+      T   +++ YPPCP P  + GL  HTD+
Sbjct:   11 NMELLAGEERPAAMEQLDDACENWGFFEILNHGISTELMDEVE----KMTKDHY-KRVREQRFLEFASKTLKEGCDDVNKAEKLDWESTFFVRHLPESNIADIPDLDDDYRRLMKRFAAELETLAERLLDLLCENLGLEKGYLTKAFRGPAGAPTFGTKVSSYPPCPRPDLVEGLRAHTDA 186          
BLAST of CN184809 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSI (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. indica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.027e-16
Identity = 51/181 (28.18%), Postives = 88/181 (48.62%), Query Frame = 1
Query:  223 NDNVVDESEREECKEEIARASQQWGFFQVTNHGISKDLLEKMREEQVKVFKQPFDKKSKEDKFMNFPAGSYRWGTPSATCLNQLSWSEAF---HIPMADIXXXXXXXXXXXXXXEQFATTVAGLARKLTAILAEKLGRESTF----FQENCLPSTCYLRMNRYPPCPVPSAIHGLMPHTDS 744
            N  ++   ER    E++  A + WGFF++ NHGIS +L++++     K+ K  + K+ +E +F+ F + + + G        +L W   F   H+P ++I              ++FA  +  LA +L  +L E LG E  +    F+      T   +++ YPPCP P  + GL  HTD+
Sbjct:   11 NMELLAGEERPAAMEQLDDACENWGFFEILNHGISTELMDEVE----KMTKDHY-KRVREQRFLEFASKTLKEGCDDVNKAEKLDWESTFFVRHLPESNIADIPDLDDDYRRLMKRFAAELETLAERLLDLLCENLGLEKGYLTKAFRGPAGAPTFGTKVSSYPPCPRPDLVKGLRAHTDA 186          
BLAST of CN184809 vs. ExPASy Swiss-Prot
Match: ACCO_DIACA (Probable 1-aminocyclopropane-1-carboxylate oxidase OS=Dianthus caryophyllus GN=ACO PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.992e-15
Identity = 59/191 (30.89%), Postives = 93/191 (48.69%), Query Frame = 1
Query:  193 PLIDLSRILHNDNVVDESEREECKEEIARASQQWGFFQVTNHGISKDLLEKMREEQVKVFKQPFDKKSKEDKFMNFPAGSYRWGTPSA-TCLNQLSWSEAF---HIPMADIXXXXXXXXXXXXXXEQFATTVAGLARKLTAILAEKLGRESTFFQE---NCLPSTCYLRMNRYPPCPVPSAIHGLMPHTDS 744
            P+ID+ + L+N N V   ER    ++I  A   WGFFQV NH +S +L++K+     ++ K+ + KK +E KF +        G  SA + +N + W   F   H P ++I              ++FA  +  L+ +L  +L E LG E  + +         T   +++ YPPCP P  I GL  HTD+
Sbjct:    8 PIIDMEK-LNNYNGV---ERSLVLDQIKDACHNWGFFQVVNHSLSHELMDKVE----RMTKEHY-KKFREQKFKDMVQTK---GLVSAESQVNDIDWESTFYLRHRPTSNISEVPDLDDQYRKLMKEFAAQIERLSEQLLDLLCENLGLEKAYLKNAFYGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDA 186          
BLAST of CN184809 vs. ExPASy Swiss-Prot
Match: ACCO2_MALDO (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Malus domestica GN=ACO2 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.992e-15
Identity = 55/190 (28.95%), Postives = 88/190 (46.32%), Query Frame = 1
Query:  193 PLIDLSRILHNDNVVDESEREECKEEIARASQQWGFFQVTNHGISKDLLEKMREEQVKVFKQPFDKKSKEDKFMNFPAGSYRWGTPSATCLNQLSWSEAF---HIPMADIXXXXXXXXXXXXXXEQFATTVAGLARKLTAILAEKLGRESTFFQENCLPS---TCYLRMNRYPPCPVPSAIHGLMPHTDS 744
            P++D+       ++++  ER    E+I  A + WGFF++ NHGIS +LL     + V+   +   KK+ E +F    A        S   ++ L W   F   H+P ++I              ++FA  +  LA KL  +L E LG E  + ++    S       +++ YPPCP P  I GL  HTD+
Sbjct:    5 PVVDM-------DLINGEERAATLEKINDACENWGFFELVNHGISTELL-----DTVEKMNKDHYKKTMEQRFKEMVAAKGLEAVQSE--IHYLDWESTFFLRHLPSSNISEIPDLEEDYRKTMKEFAVELEKLAEKLLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDA 180          
BLAST of CN184809 vs. ExPASy Swiss-Prot
Match: ACCO1_MALDO (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.515e-15
Identity = 57/190 (30.00%), Postives = 90/190 (47.37%), Query Frame = 1
Query:  193 PLIDLSRILHNDNVVDESEREECKEEIARASQQWGFFQVTNHGISKDLLEKMREEQVKVFKQPFDKKSKEDKFMNFPAGSYRWGTPSATCLNQLSWSEAF---HIPMADIXXXXXXXXXXXXXXEQFATTVAGLARKLTAILAEKLGRESTFFQENCLPS---TCYLRMNRYPPCPVPSAIHGLMPHTDS 744
            P++DLS       +V+  ER    E+I  A + WGFF++ NHG+S +LL+ +     K+ K  + KK+ E +F    A        S   ++ L W   F   H+P ++I              ++FA  +  LA KL  +L E LG E  + ++    S       +++ YPPCP P  I GL  H+D+
Sbjct:    5 PVVDLS-------LVNGEERAATLEKINDACENWGFFELVNHGMSTELLDTVE----KMTKDHY-KKTMEQRFKEMVAAKGLDDVQSE--IHDLDWESTFFLRHLPSSNISEIPDLEEEYRKTMKEFAVELEKLAEKLLDLLCENLGLEKGYLKKVFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHSDA 180          
BLAST of CN184809 vs. ExPASy Swiss-Prot
Match: ACCO1_ARATH (1-aminocyclopropane-1-carboxylate oxidase OS=Arabidopsis thaliana GN=ACO PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 8.515e-15
Identity = 54/190 (28.42%), Postives = 92/190 (48.42%), Query Frame = 1
Query:  193 PLIDLSRILHNDNVVDESEREECKEEIARASQQWGFFQVTNHGISKDLLEKMREEQVKVFKQPFDKKSKEDKFMNFPAGSYRWGTPSATCLNQLSWSEAF---HIPMADIXXXXXXXXXXXXXXEQFATTVAGLARKLTAILAEKLGRESTFFQENCLPS---TCYLRMNRYPPCPVPSAIHGLMPHTDS 744
            P+I+L ++       +  ER    E+I  A + WGFF+  NHGIS +LL+K+ +   + +K+  +++ KE    N    S R      + +N + W   F   H+P+++I              + FA  +  L+ +L  +L E LG E  + ++    S   T   +++ YPPCP P  + GL  HTD+
Sbjct:    5 PIINLEKL-------NGEERAITMEKIKDACENWGFFECVNHGISLELLDKVEKMTKEHYKKCMEERFKE-SIKNRGLDSLR------SEVNDVDWESTFYLKHLPVSNISDVPDLDDDYRTLMKDFAGKIEKLSEELLDLLCENLGLEKGYLKKVFYGSKRPTFGTKVSNYPPCPNPDLVKGLRAHTDA 180          
BLAST of CN184809 vs. ExPASy Swiss-Prot
Match: SRG1_ARATH (Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.452e-14
Identity = 56/199 (28.14%), Postives = 93/199 (46.73%), Query Frame = 1
Query:  187 ELPLIDLSRILHNDNVVDESEREECKEEIARASQQWGFFQVTNHGISKDLLEKMREEQVKVFKQPFDKKSKEDKFMNFPAGSYRWGTPSATCLNQ-LSWSEAFH-----IPMADIXXXXXXXXXXXXXXEQFATTVAGLARKLTAILAEKLGRESTFFQE--NCLPSTCYLRMNRYPPCPVPSAIHGLMPHTDSDFLTI 759
            E+P+ID+ R+  +  +  E E+ +       A ++WGFFQ+ NHGI    L+K++ E    F  P ++K    KF   P     +G       +Q L W++ F      + +                 E +++ V  +A+ L A +A  L  +    ++  + + S   +RMN YPPCP P  + GL PH+DS  LT+
Sbjct:   52 EIPIIDMKRLCSSTTMDSEVEKLDF------ACKEWGFFQLVNHGIDSSFLDKVKSEIQDFFNLPMEEKK---KFWQRPDEIEGFGQAFVVSEDQKLDWADLFFHTVQPVELRKPHLFPKLPLPFRDTLEMYSSEVQSVAKILIAKMARALEIKPEELEKLFDDVDSVQSMRMNYYPPCPQPDQVIGLTPHSDSVGLTV 241          
BLAST of CN184809 vs. ExPASy Swiss-Prot
Match: LDOX_VITVI (Leucoanthocyanidin dioxygenase OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.452e-14
Identity = 58/201 (28.86%), Postives = 90/201 (44.78%), Query Frame = 1
Query:  187 ELPLIDLSRILHNDNVVDESEREECKEEIARASQQWGFFQVTNHGISKDLLEKMREEQVKVFKQPFDKKSKEDKFMNFPAGSYRWGTPSATCLN---QLSWSE-AFHI----PMADIXXXXXXXXXXXXXXEQFATTVAGLARKLTAILAEKLGRESTFFQENCLPSTCYL---RMNRYPPCPVPSAIHGLMPHTDSDFLT 756
            ++P IDL  I   D VV    RE C+EE+ +A+ +WG   + NHGIS DL+ +++      F  P ++K   +K+ N  A     G  S    N   QL W +  FH+       D+               +++  +  LA K+ ++L+  LG E    ++        L   ++N YP CP P    G+  HTD   LT
Sbjct:   48 QVPTIDLKDIESEDEVVRREIRERCREELKKAAMEWGVMHLVNHGISDDLINRVKVAGETFFNLPMEEK---EKYANDQASGKIAGYGSKLANNASGQLEWEDYFFHLIFPEDKRDMTIWPKTPSDYVPATCEYSVKLRSLATKILSVLSLGLGLEEGRLEKEVGGMEELLLQKKINYYPKCPQPELALGVEAHTDVSALT 245          
The following BLAST results are available for this feature:
BLAST of CN184809 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
G2OX8_ARATH1.931e-6756.96Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis th... [more]
G2OX7_ARATH3.677e-3434.93Gibberellin 2-beta-dioxygenase 7 OS=Arabidopsis th... [more]
ACCO1_ORYSJ1.552e-1628.181-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]
ACCO1_ORYSI2.027e-1628.181-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]
ACCO_DIACA4.992e-1530.89Probable 1-aminocyclopropane-1-carboxylate oxidase... [more]
ACCO2_MALDO4.992e-1528.951-aminocyclopropane-1-carboxylate oxidase 2 OS=Mal... [more]
ACCO1_MALDO8.515e-1530.001-aminocyclopropane-1-carboxylate oxidase 1 OS=Mal... [more]
ACCO1_ARATH8.515e-1528.421-aminocyclopropane-1-carboxylate oxidase OS=Arabi... [more]
SRG1_ARATH1.452e-1428.14Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 ... [more]
LDOX_VITVI1.452e-1428.86Leucoanthocyanidin dioxygenase OS=Vitis vinifera P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006C08_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184809 ID=CN184809; Name=CN184809; organism=Citrus sinensis; type=EST; length=761bp
GAGGAGGAAGTGATGCATCCCTCATTCAAGAAAGTACAAATGCTGGAGTC
TGACAACTTCATCACAGAATTAAACCAGCCGCTAAACATGGCCACGGACC
CACCATTTCACCAAGCTTACAAGTCCCTCATCGAAGATACCTCAAACAAT
ATCTTTGGCAAGAAGCTTGTACTTGTTGAGGAATGTGAGCTTCCGCTGAT
TGATCTTAGCCGAATACTTCATAATGATAACGTCGTCGACGAATCAGAAA
GAGAAGAGTGCAAGGAGGAGATAGCTAGGGCTTCTCAGCAATGGGGTTTT
TTCCAAGTTACTAATCATGGGATTTCAAAAGATTTACTGGAGAAGATGAG
AGAAGAGCAAGTGAAAGTTTTCAAGCAGCCTTTTGATAAGAAAAGCAAAG
AAGACAAGTTCATGAATTTCCCAGCTGGCAGTTACCGCTGGGGAACACCA
TCGGCCACATGTCTCAACCAGTTATCGTGGTCCGAAGCTTTTCACATTCC
TATGGCCGATATCTCTGCTTCTGCTGCTGCTTTCACTACTCTCAGTTCAA
CTCTGGAACAGTTTGCTACGACAGTGGCGGGTCTTGCCCGAAAGTTAACT
GCAATCCTGGCGGAGAAATTAGGTCGCGAGTCAACGTTTTTCCAAGAAAA
TTGCTTGCCAAGCACATGCTACCTTAGAATGAACAGATACCCACCATGCC
CTGTCCCTTCAGCGATACACGGGCTGATGCCGCACACAGACAGTGACTTC
CTCACAATATT
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