CN184798
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN184798 vs. ExPASy Swiss-Prot
Match: SCAM4_ARATH (Secretory carrier-associated membrane protein 4 OS=Arabidopsis thaliana GN=SCAMP4 PE=2 SV=1) HSP 1 Score: 305.834 bits (782), Expect = 1.475e-82 Identity = 147/207 (71.01%), Postives = 164/207 (79.23%), Query Frame = 1 Query: 106 MNRHHDPNPFDEEE--VNPFSNGPAAPASRSQVPSVTSEPIGFGQKYGATVDIPLDNMNEPKKKERELASWEADLXXXXXXXXXXXXAIVKAGVPTDDRNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIAVIVCWIKGGGVKIFFLATIYALLGVPMSYVLWYRPLYRAMRTDSALKFSWFFLFYLIHIGFCI 720 MNRHHDPNPFDE+E VNPFS G +VP+ S P+ +GQ ATVDIPLDNMN+ +K+R+LA WEA+L AI K GV DD+NWPPFFPIIHHDI+KEIP+HAQ+LQYLAFASW GIVLCLVFNVIA +VCWIKGGGVKIFFLATIYAL+G P+SYVLWYRPLYRAMRTDSALKF WFF YLIHIGFCI Sbjct: 1 MNRHHDPNPFDEDEEIVNPFSKGGG------RVPAA-SRPVEYGQSLDATVDIPLDNMNDSSQKQRKLADWEAELRKKEMDIKRREEAIAKFGVQIDDKNWPPFFPIIHHDIAKEIPVHAQKLQYLAFASWLGIVLCLVFNVIATMVCWIKGGGVKIFFLATIYALIGCPLSYVLWYRPLYRAMRTDSALKFGWFFFTYLIHIGFCI 200
BLAST of CN184798 vs. ExPASy Swiss-Prot
Match: SCAM6_ORYSJ (Secretory carrier-associated membrane protein 6 OS=Oryza sativa subsp. japonica GN=SCAMP6 PE=2 SV=1) HSP 1 Score: 270.396 bits (690), Expect = 6.869e-72 Identity = 133/208 (63.94%), Postives = 150/208 (72.12%), Query Frame = 1 Query: 115 HHDPNPFDEEEV--NPFSNGPAAPA---SRSQVPSVTSEPIGFGQKYG-ATVDIPLDNMNEPKKKERELASWEADLXXXXXXXXXXXXAIVKAGVPTDDRNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIAVIVCWIKGGGVKIFFLATIYALLGVPMSYVLWYRPLYRAMRTDSALKFSWFFLFYLIHIGFCI 720 HHDPNPFDE NPFSNG SR Q +EP GFG G ATVD+PLD M + K K REL+SWE DL A+ AGVP +D+NWPPFFPIIHHDI+ EIP + Q+LQYLAFASW GIVLCL +N IAVIVCWIK G K+FFLATIYALLG+P+SY++WYRPLYRAMRT+SA F WFFL YLIHIGFCI Sbjct: 2 HHDPNPFDEGNADDNPFSNGGGGGGGGGSRQQYGFRPTEPAGFGAGRGDATVDVPLDTMGDSKSKARELSSWETDLKRREADIKRREEALRNAGVPMEDKNWPPFFPIIHHDIANEIPANLQKLQYLAFASWLGIVLCLSWNFIAVIVCWIKEGDSKLFFLATIYALLGIPLSYLIWYRPLYRAMRTNSAFSFGWFFLCYLIHIGFCI 209
BLAST of CN184798 vs. ExPASy Swiss-Prot
Match: SCAM5_ORYSJ (Secretory carrier-associated membrane protein 5 OS=Oryza sativa subsp. japonica GN=SCAMP5 PE=2 SV=1) HSP 1 Score: 261.922 bits (668), Expect = 2.443e-69 Identity = 129/217 (59.45%), Postives = 152/217 (70.05%), Query Frame = 1 Query: 115 HHDPNPFDE-EEVNPFSNGPAAPASR--------------SQVPSVTSEPIGFGQKYGATVDIPLDNMNEPKKKERELASWEADLXXXXXXXXXXXXAIVKAGVPTDDRNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIAVIVCWIKGGGVKIFFLATIYALLGVPMSYVLWYRPLYRAMRTDSALKFSWFFLFYLIHIGFCI 720 HHDPNPFDE + NPFSNG A R SQ S +G G K GATVDIPLDNM++ K K +EL WEADL A+ AGVP +++NWPPFFPIIHHDI+ EIP +AQ+LQYLAFASW GIVLCL +N IAVIVCWI+GG K+FFLATIY +LG+P+SY++WYRPLYRAMRTDSA F WFFL Y++HI FC+ Sbjct: 2 HHDPNPFDEGADDNPFSNGGGGGARRGGGGGGGGGGGGGKSQF-SFGFGGLGGGSKGGATVDIPLDNMSDSKGKGKELLQWEADLKRREADIRRREEALKSAGVPMEEKNWPPFFPIIHHDIANEIPANAQKLQYLAFASWLGIVLCLFWNFIAVIVCWIRGGDSKLFFLATIYGMLGMPLSYLMWYRPLYRAMRTDSAFSFGWFFLCYMLHIAFCV 217
BLAST of CN184798 vs. ExPASy Swiss-Prot
Match: SCAM2_ORYSJ (Secretory carrier-associated membrane protein 2 OS=Oryza sativa subsp. japonica GN=SCAMP2 PE=2 SV=1) HSP 1 Score: 249.21 bits (635), Expect = 1.639e-65 Identity = 120/205 (58.54%), Postives = 146/205 (71.22%), Query Frame = 1 Query: 106 MNRHHDPNPFDEEEVNPFSNGPAAPASRSQVPSVTSEPIGFGQKYGATVDIPLDNMNEPKKKERELASWEADLXXXXXXXXXXXXAIVKAGVPTDDRNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIAVIVCWIKGGGVKIFFLATIYALLGVPMSYVLWYRPLYRAMRTDSALKFSWFFLFYLIHIGFCI 720 M +D NPFDE++VNPF+ G PAS S++P + EP GF GATVDIPLD+ + KKKE+EL + EA+L A +AG+ +++NWPPFFPIIHHDIS EIPIH QR+QYLAF+S G+ CL +N+IA WIKG GV I+ LA IY + GVP +YVLWYRPLY AMRT+SALKF WFFLFYLIHI FCI Sbjct: 1 MAGRYDRNPFDEDDVNPFAGGSVPPASNSRMPPLPHEP-GFYNDRGATVDIPLDSTKDMKKKEKELQAKEAELNKRESELRRREEAASRAGIVIEEKNWPPFFPIIHHDISNEIPIHLQRMQYLAFSSLLGLAACLFWNIIATTAAWIKGAGVMIWLLAIIYFISGVPGAYVLWYRPLYNAMRTESALKFGWFFLFYLIHILFCI 204
BLAST of CN184798 vs. ExPASy Swiss-Prot
Match: SCAM_PEA (Secretory carrier-associated membrane protein OS=Pisum sativum GN=PSAM2 PE=2 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 8.133e-65 Identity = 117/206 (56.80%), Postives = 147/206 (71.36%), Query Frame = 1 Query: 106 MNRHHDPNPFDEEEVNPFSNG-PAAPASRSQVPSVTSEPIGFGQKYGATVDIPLDNMNEPKKKERELASWEADLXXXXXXXXXXXXAIVKAGVPTDDRNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIAVIVCWIKGGGVKIFFLATIYALLGVPMSYVLWYRPLYRAMRTDSALKFSWFFLFYLIHIGFCI 720 M +DPNPFDEE+VNPFSN AA A+ S+ + + + +G TVDIPLD + KKKER+L + EA+L AI +AG+ +++NWPPFFPIIHHDI+ EIPIH + LQY+AF S G+VLCL +NV++V WIKG GVKI+FLA IY + GVP +Y LWYRPLYRA RTDSA+KF WFF+FYL+HIGFCI Sbjct: 1 MAGRYDPNPFDEEQVNPFSNPRSAASATNSRPAPLNPDRADYNYGFGPTVDIPLDTSTDGKKKERDLQAKEAELRKREQEVRRKEEAIARAGIVIEEKNWPPFFPIIHHDITNEIPIHLRTLQYVAFFSLLGLVLCLTWNVVSVTAAWIKGEGVKIWFLAIIYFIAGVPGAYALWYRPLYRAFRTDSAIKFGWFFMFYLLHIGFCI 206
BLAST of CN184798 vs. ExPASy Swiss-Prot
Match: SCAM3_ARATH (Secretory carrier-associated membrane protein 3 OS=Arabidopsis thaliana GN=SCAMP3 PE=1 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 1.696e-62 Identity = 117/209 (55.98%), Postives = 146/209 (69.86%), Query Frame = 1 Query: 106 MNRHHDPNPF-DEEEVNPFSNGPAAP-ASRSQVPSVTSEPIGFGQKYGATVDIPLDNMN--EPKKKERELASWEADLXXXXXXXXXXXXAIVKAGVPTDDRNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIAVIVCWIKGGGVKIFFLATIYALLGVPMSYVLWYRPLYRAMRTDSALKFSWFFLFYLIHIGFCI 720 M +DPNPF +EEEVNPF+N P AS S++ + EP+GF YG TVDIPLD + KKKE+EL + EA+L A +AG+ + +NWPPFFP+IHHDI+ EIP+H QRLQY+ FA++ G+VLCL +N+IAV WIKG GV I+ LA IY + GVP YVLWYRPLYRA RTDSAL F WFFLFY++HI FC+ Sbjct: 1 MANRYDPNPFAEEEEVNPFANARGVPPASNSRLSPLPPEPVGFD--YGRTVDIPLDRAGTQDLKKKEKELQAKEAELKRREQDLKRKEDAAARAGIVIEVKNWPPFFPLIHHDIANEIPVHLQRLQYVTFATYLGLVLCLFWNIIAVTTAWIKGEGVTIWLLALIYFIAGVPGGYVLWYRPLYRAFRTDSALSFGWFFLFYMLHIAFCV 207
BLAST of CN184798 vs. ExPASy Swiss-Prot
Match: SCAM3_ORYSJ (Secretory carrier-associated membrane protein 3 OS=Oryza sativa subsp. japonica GN=SCAMP3 PE=2 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 3.536e-60 Identity = 108/201 (53.73%), Postives = 141/201 (70.15%), Query Frame = 1 Query: 118 HDPNPFDEEEVNPFSNGPAAPASRSQVPSVTSEPIGFGQKYGATVDIPLDNMNEPKKKERELASWEADLXXXXXXXXXXXXAIVKAGVPTDDRNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIAVIVCWIKGGGVKIFFLATIYALLGVPMSYVLWYRPLYRAMRTDSALKFSWFFLFYLIHIGFCI 720 H N F++++VNPF+ G PA+ S++P ++ EP F VDIPLD+ + KKKE+EL + EA+L A +AG+ +D+NWPPFFP+IHH+IS EIPIH QR+QYLAF+S+ G+ CL +N+IA W+KG GV I+ LA IY + GVP +YVLWYRPLY AMRT+SALKF WFFLFYLIHI FC+ Sbjct: 5 HGRNGFEDDDVNPFAGGSVPPANNSRLPPLSHEPADF-----YNVDIPLDSSKDLKKKEKELQAMEAELNKRERELKRKEEAAAQAGIVIEDKNWPPFFPLIHHNISNEIPIHLQRMQYLAFSSFLGLAACLFWNIIATTTAWVKGEGVIIWLLAIIYFISGVPGAYVLWYRPLYNAMRTESALKFGWFFLFYLIHIIFCV 200
BLAST of CN184798 vs. ExPASy Swiss-Prot
Match: SCAM1_ARATH (Secretory carrier-associated membrane protein 1 OS=Arabidopsis thaliana GN=SCAMP1 PE=1 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 8.710e-59 Identity = 106/201 (52.74%), Postives = 140/201 (69.65%), Query Frame = 1 Query: 118 HDPNPFDEEEVNPFSNGPAAPASRSQVPSVTSEPIGFGQKYGATVDIPLDNMNEPKKKERELASWEADLXXXXXXXXXXXXAIVKAGVPTDDRNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIAVIVCWIKGGGVKIFFLATIYALLGVPMSYVLWYRPLYRAMRTDSALKFSWFFLFYLIHIGFCI 720 + + FD+ E+NPF+N + PA+ S++ + EP GAT+DIPLD+ + K KE+EL EA+L AI +AG+ +++NWPPFFP+IHHDIS EIPIH QR+QY+AF S G+V+CL++N++AV WIKG G I+FLA IY + GVP +YV+WYRPLYRAMRTDSALKF WFF YL HI FC+ Sbjct: 4 YQSHSFDDGEINPFANPTSVPAATSKLSPLPPEPYD----RGATMDIPLDSGKDLKAKEKELREKEAELKRREQEIKRKEDAIAQAGIVIEEKNWPPFFPLIHHDISNEIPIHLQRIQYVAFTSMLGLVVCLLWNIVAVTTAWIKGEGPTIWFLAIIYFISGVPGAYVMWYRPLYRAMRTDSALKFGWFFFTYLFHIAFCV 200
BLAST of CN184798 vs. ExPASy Swiss-Prot
Match: SCAM5_ARATH (Secretory carrier-associated membrane protein 5 OS=Arabidopsis thaliana GN=SCAMP5 PE=2 SV=2) HSP 1 Score: 218.394 bits (555), Expect = 3.098e-56 Identity = 112/211 (53.08%), Postives = 141/211 (66.82%), Query Frame = 1 Query: 106 MNRHHDPNPFDEE-EVNPFSNGPAAPA-SRSQVPSVTSEPIGFGQKYGATVDIPLDN----MNEPKKKERELASWEADLXXXXXXXXXXXXAIVKAGVPTDDRNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIAVIVCWIKGGGVKIFFLATIYALLGVPMSYVLWYRPLYRAMRTDSALKFSWFFLFYLIHIGFCI 720 M +D N FDE+ EVNPF+N + PA S S++ + EP GFG YG TVDIPLD + KKKE+EL + EADL A +AG+ + +NWP FFP+IHHDI+ EI + QRLQY+AFA++ G+VL L +N+IAV WIKG GV I+ LA IY + GVP YVLWYRPLYRA R+DSA F WFFLFY++HI FC+ Sbjct: 1 MGGRYDRNTFDEQDEVNPFANPGSVPAASNSRLSPLPPEPAGFG--YGRTVDIPLDRPGSGAQDLKKKEKELQAKEADLRRREQDLKRKQDAAARAGIVIEAKNWPTFFPLIHHDIANEILVRLQRLQYIAFATYLGLVLALFWNIIAVTTAWIKGEGVTIWLLAVIYFISGVPGGYVLWYRPLYRAFRSDSAFNFGWFFLFYMLHILFCL 209
BLAST of CN184798 vs. ExPASy Swiss-Prot
Match: SCAM2_ARATH (Secretory carrier-associated membrane protein 2 OS=Arabidopsis thaliana GN=SCAMP2 PE=2 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 6.901e-56 Identity = 107/201 (53.23%), Postives = 136/201 (67.66%), Query Frame = 1 Query: 118 HDPNPFDEEEVNPFSNGPAAP-ASRSQVPSVTSEPIGFGQKYGATVDIPLDNMNEPKKKERELASWEADLXXXXXXXXXXXXAIVKAGVPTDDRNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIAVIVCWIKGGGVKIFFLATIYALLGVPMSYVLWYRPLYRAMRTDSALKFSWFFLFYLIHIGFC 717 HDPNPF +EE+NPF+N + P AS S + + EP GATVDIPLD+ N+ + KE EL + E +L AI + GV +++NWP FFP+IHHDI EIPIH Q++QY+AF + G+V CL++N++AV V WIKG G I+ L+ IY L GVP +YVLWYRPLYRA RTDSALKF FF FY+ HI FC Sbjct: 4 HDPNPFADEEINPFANHTSVPPASNSYLKPLPPEPYD----RGATVDIPLDSGNDLRAKEMELQAKENELKRKEQELKRREDAIARTGVVIEEKNWPEFFPLIHHDIPNEIPIHLQKIQYVAFTTLLGLVGCLLWNIVAVTVAWIKGEGPTIWLLSIIYFLAGVPGAYVLWYRPLYRATRTDSALKFGAFFFFYVFHIAFC 200 The following BLAST results are available for this feature:
BLAST of CN184798 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184798 ID=CN184798; Name=CN184798; organism=Citrus sinensis; type=EST; length=722bpback to top |