CN184793
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN184793 vs. ExPASy Swiss-Prot
Match: RRFC_SPIOL (Ribosome-recycling factor, chloroplastic OS=Spinacia oleracea GN=RRF PE=1 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 2.326e-28 Identity = 61/70 (87.14%), Postives = 69/70 (98.57%), Query Frame = -2 Query: 175 ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYKQ 384 +RRKEL+KVV+K AEEGKVAVRNIRRDALK+YEKL+KEKKLSEDNVKDLS+DLQKLTDEYMKK++SIYKQ Sbjct: 194 DRRKELAKVVSKLAEEGKVAVRNIRRDALKSYEKLEKEKKLSEDNVKDLSADLQKLTDEYMKKVESIYKQ 263
BLAST of CN184793 vs. ExPASy Swiss-Prot
Match: RRFC_DAUCA (Ribosome-recycling factor, chloroplastic (Fragment) OS=Daucus carota GN=RRF PE=2 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 1.154e-27 Identity = 58/70 (82.86%), Postives = 69/70 (98.57%), Query Frame = -2 Query: 175 ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYKQ 384 +RRKELSK+VAKQAEEGKVA+RNIRRDA+K+Y+KL+KEKKLSEDNVKDLSSDLQK+ DEY+KK+DSI+KQ Sbjct: 150 DRRKELSKIVAKQAEEGKVALRNIRRDAIKSYDKLEKEKKLSEDNVKDLSSDLQKVIDEYIKKVDSIFKQ 219
BLAST of CN184793 vs. ExPASy Swiss-Prot
Match: RRFC_ARATH (Ribosome-recycling factor, chloroplastic OS=Arabidopsis thaliana GN=RRF PE=1 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 4.386e-27 Identity = 59/70 (84.29%), Postives = 67/70 (95.71%), Query Frame = -2 Query: 175 ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYKQ 384 +RRKELSKVVAKQ+EEGKVA+RNIRRDALK+Y+KL+KEKKLSEDNVKDLSSDLQKL D YMKKI+ +YKQ Sbjct: 198 DRRKELSKVVAKQSEEGKVALRNIRRDALKSYDKLEKEKKLSEDNVKDLSSDLQKLIDVYMKKIEELYKQ 267
BLAST of CN184793 vs. ExPASy Swiss-Prot
Match: RRFC_ORYSJ (Ribosome-recycling factor, chloroplastic OS=Oryza sativa subsp. japonica GN=Os07g0570700 PE=2 SV=2) HSP 1 Score: 117.472 bits (293), Expect = 2.177e-26 Identity = 57/70 (81.43%), Postives = 67/70 (95.71%), Query Frame = -2 Query: 175 ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYKQ 384 +RRKEL+K VAK AEEGKVA+RNIRRDA+KAY+KL+KEKKLSEDNVKDLS+DLQK+TDEYMKKI++I KQ Sbjct: 189 DRRKELAKTVAKLAEEGKVAIRNIRRDAIKAYDKLEKEKKLSEDNVKDLSADLQKVTDEYMKKIEAIQKQ 258
BLAST of CN184793 vs. ExPASy Swiss-Prot
Match: RRFC_ORYSI (Ribosome-recycling factor, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_26546 PE=1 SV=2) HSP 1 Score: 117.472 bits (293), Expect = 2.177e-26 Identity = 57/70 (81.43%), Postives = 67/70 (95.71%), Query Frame = -2 Query: 175 ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYKQ 384 +RRKEL+K VAK AEEGKVA+RNIRRDA+KAY+KL+KEKKLSEDNVKDLS+DLQK+TDEYMKKI++I KQ Sbjct: 189 DRRKELAKTVAKLAEEGKVAIRNIRRDAIKAYDKLEKEKKLSEDNVKDLSADLQKVTDEYMKKIEAIQKQ 258
BLAST of CN184793 vs. ExPASy Swiss-Prot
Match: RRF_SYNJB (Ribosome-recycling factor OS=Synechococcus sp. GN=frr PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.042e-16 Identity = 41/67 (61.19%), Postives = 51/67 (76.12%), Query Frame = -2 Query: 184 ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 384 ERRKELSK VAK AEEG+V++RNIRRD + + K +K +LSED K L D+QKLTD Y+KKID + Sbjct: 105 ERRKELSKQVAKLAEEGRVSIRNIRRDGIDSVRKREKNGELSEDESKSLQDDIQKLTDRYIKKIDEL 171
BLAST of CN184793 vs. ExPASy Swiss-Prot
Match: RRF_BACSU (Ribosome-recycling factor OS=Bacillus subtilis GN=frr PE=1 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 1.729e-15 Identity = 41/69 (59.42%), Postives = 52/69 (75.36%), Query Frame = -2 Query: 178 ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 384 ERRKEL KVV K AEE KVAVRN+RRDA +KL+K ++ED ++ + D+QKLTDEY+ KIDS+ K Sbjct: 108 ERRKELVKVVKKYAEEAKVAVRNVRRDANDDLKKLEKNGDITEDELRASTEDVQKLTDEYVSKIDSVTK 176
BLAST of CN184793 vs. ExPASy Swiss-Prot
Match: RRF_BACA2 (Ribosome-recycling factor OS=Bacillus amyloliquefaciens (strain FZB42) GN=frr PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.729e-15 Identity = 41/69 (59.42%), Postives = 52/69 (75.36%), Query Frame = -2 Query: 178 ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 384 ERRKEL KVV K AEE KVAVRN+RRD+ +KL+K ++ED ++ S D+QKLTDEY+ KIDS+ K Sbjct: 108 ERRKELVKVVKKYAEEAKVAVRNVRRDSNDDLKKLEKNGDITEDELRASSEDVQKLTDEYVSKIDSVTK 176
BLAST of CN184793 vs. ExPASy Swiss-Prot
Match: RRF_BACP2 (Ribosome-recycling factor OS=Bacillus pumilus (strain SAFR-032) GN=frr PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.949e-15 Identity = 39/69 (56.52%), Postives = 52/69 (75.36%), Query Frame = -2 Query: 178 ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 384 ERRKEL KVV K +EE KVAVRN+RRDA +KL+K +++ED ++ + D+QKLTDEY+ KID + K Sbjct: 108 ERRKELVKVVRKYSEEAKVAVRNVRRDANDELKKLEKNGEITEDELRSSTEDVQKLTDEYVAKIDDVMK 176
BLAST of CN184793 vs. ExPASy Swiss-Prot
Match: RRF_CYAP7 (Ribosome-recycling factor OS=Cyanothece sp. (strain PCC 7424) GN=frr PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 5.030e-15 Identity = 38/67 (56.72%), Postives = 50/67 (74.63%), Query Frame = -2 Query: 184 ERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 384 ERRKEL K+ K AEEGKVA+RNIRRDA+ + K +K +LSED ++L ++QK+TDEY KID + Sbjct: 105 ERRKELVKLAGKLAEEGKVAIRNIRRDAIDSVRKQEKNHELSEDESRNLQDEIQKVTDEYTAKIDEL 171 The following BLAST results are available for this feature:
BLAST of CN184793 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 443
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184793 ID=CN184793; Name=CN184793; organism=Citrus sinensis; type=EST; length=385bpback to top |