CN184790

Overview
NameCN184790
Unique NameCN184790
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length514
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6025 contig Csv1_Contig6025:1068..1581. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN184790 vs. ExPASy Swiss-Prot
Match: PLT5_ARATH (Polyol transporter 5 OS=Arabidopsis thaliana GN=PLT5 PE=1 SV=2)

HSP 1 Score: 242.662 bits (618), Expect = 7.706e-64
Identity = 119/170 (70.00%), Postives = 150/170 (88.24%), Query Frame = -1
Query:    5 AVVLYSPRIFEKAGIASSDKKLLATVAVGFVKTIFILVATFLLDKIGRRPLLLSSVAGMIASLATLAISLTVIDQSHKKMIWAIGLAISTVLSYVAFFSIGMGPITWVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLYASIASVAWVFFYT 514
            AVVL+SPRIF+ AG+ +  ++LLATVAVG VKT FILVATFLLD+IGRRPLLL+SV GM+ SLA L  SLT+IDQS KK++WA+ +AI+TV++YVA FSIG GPITWVYSSEI PL+LR+QG+S+GV+VNRVTSGV+S++FL +SKA+T GG+F+L+  IA+VAWVFFYT
Sbjct:  312 AVVLFSPRIFKTAGLKTDHQQLLATVAVGVVKTSFILVATFLLDRIGRRPLLLTSVGGMVLSLAALGTSLTIIDQSEKKVMWAVVVAIATVMTYVATFSIGAGPITWVYSSEIFPLRLRSQGSSMGVVVNRVTSGVISISFLPMSKAMTTGGAFYLFGGIATVAWVFFYT 481          
BLAST of CN184790 vs. ExPASy Swiss-Prot
Match: PLT3_ARATH (Probable polyol transporter 3 OS=Arabidopsis thaliana GN=PLT3 PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 4.528e-56
Identity = 107/169 (63.31%), Postives = 136/169 (80.47%), Query Frame = -1
Query:    8 AVVLYSPRIFEKAGIASSDKKLLATVAVGFVKTIFILVATFLLDKIGRRPLLLSSVAGMIASLATLAISLTVIDQSHKKMIWAIGLAISTVLSYVAFFSIGMGPITWVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLYASIASVAWVFFY 514
            AVVLYSPRIF+KAG+ S DK LLATV VG  K  FI++ATFLLDK+GRR LLL+S  GM+ +L +LA+SLT++ Q   ++ WA+ L+I +  ++VAFFSIG+GPITWVYSSEI PL+LRAQGASIGV VNR+ +  VSM+FLS++KAIT GG FF++A IA  AW FF+
Sbjct:  298 AVVLYSPRIFKKAGVVSKDKLLLATVGVGLTKAFFIIIATFLLDKVGRRKLLLTSTGGMVFALTSLAVSLTMV-QRFGRLAWALSLSIVSTYAFVAFFSIGLGPITWVYSSEIFPLRLRAQGASIGVAVNRIMNATVSMSFLSMTKAITTGGVFFVFAGIAVAAWWFFF 465          
BLAST of CN184790 vs. ExPASy Swiss-Prot
Match: PLT2_ARATH (Putative polyol transporter 2 OS=Arabidopsis thaliana GN=PLT2 PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 4.528e-56
Identity = 106/171 (61.99%), Postives = 140/171 (81.87%), Query Frame = -1
Query:    5 AVVLYSPRIFEKAGIASSDKKLLATVAVGFVKTIFILVATFLLDKIGRRPLLLSSVAGMIASLATLAISLTVIDQSHKKMI-WAIGLAISTVLSYVAFFSIGMGPITWVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLYASIASVAWVFFYT 514
            AVVLYSP IF +AG+ S + +LLATVAVG VKT+FI+V T L+D+ GRR LLL+S+ GM  SL  L  SLTVID++  + + WAIGLA++TV+++VA FS+G GP+TWVY+SEI P++LRAQGAS+GVM+NR+ SG++ MTFLSLSK +TIGG+F L+A +A  AWVFF+T
Sbjct:  302 AVVLYSPTIFSRAGLKSKNDQLLATVAVGVVKTLFIVVGTCLVDRFGRRALLLTSMGGMFFSLTALGTSLTVIDRNPGQTLKWAIGLAVTTVMTFVATFSLGAGPVTWVYASEIFPVRLRAQGASLGVMLNRLMSGIIGMTFLSLSKGLTIGGAFLLFAGVAVAAWVFFFT 472          
BLAST of CN184790 vs. ExPASy Swiss-Prot
Match: PLT1_ARATH (Putative polyol transporter 1 OS=Arabidopsis thaliana GN=PLT1 PE=2 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 5.914e-56
Identity = 106/171 (61.99%), Postives = 140/171 (81.87%), Query Frame = -1
Query:    5 AVVLYSPRIFEKAGIASSDKKLLATVAVGFVKTIFILVATFLLDKIGRRPLLLSSVAGMIASLATLAISLTVIDQSHKKMI-WAIGLAISTVLSYVAFFSIGMGPITWVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLYASIASVAWVFFYT 514
            AVVLYSP IF KAG+ S + +LLATVAVG VKT+FI+V T ++D+ GRR LLL+S+ GM  SL  L  SLTVI+++  + + WAIGLA++TV+++VA FSIG GP+TWVY SEI P++LRAQGAS+GVM+NR+ SG++ MTFLSLSK +TIGG+F L+A +A+ AWVFF+T
Sbjct:  302 AVVLYSPTIFSKAGLKSKNDQLLATVAVGVVKTLFIVVGTCVVDRFGRRALLLTSMGGMFLSLTALGTSLTVINRNPGQTLKWAIGLAVTTVMTFVATFSIGAGPVTWVYCSEIFPVRLRAQGASLGVMLNRLMSGIIGMTFLSLSKGLTIGGAFLLFAGVAAAAWVFFFT 472          
BLAST of CN184790 vs. ExPASy Swiss-Prot
Match: PLT6_ARATH (Probable polyol transporter 6 OS=Arabidopsis thaliana GN=PLT6 PE=2 SV=2)

HSP 1 Score: 209.92 bits (533), Expect = 5.535e-54
Identity = 102/169 (60.36%), Postives = 129/169 (76.33%), Query Frame = -1
Query:    8 AVVLYSPRIFEKAGIASSDKKLLATVAVGFVKTIFILVATFLLDKIGRRPLLLSSVAGMIASLATLAISLTVIDQSHKKMIWAIGLAISTVLSYVAFFSIGMGPITWVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLYASIASVAWVFFY 514
            AV+LY PRIF+KAGI + DK  L T+ VG +KT FI  AT LLDK+GRR LLL+SV GM+ +L  L   LT+   +  K+ WA+ L+I    S+VAFFSIG+GPITWVYSSE+ PLKLRAQGAS+GV VNRV +  VSM+FLSL+ AIT GG+FF++A +A+VAW FF+
Sbjct:  293 AVLLYGPRIFKKAGITTKDKLFLVTIGVGIMKTTFIFTATLLLDKVGRRKLLLTSVGGMVIALTMLGFGLTMAQNAGGKLAWALVLSIVAAYSFVAFFSIGLGPITWVYSSEVFPLKLRAQGASLGVAVNRVMNATVSMSFLSLTSAITTGGAFFMFAGVAAVAWNFFF 461          
BLAST of CN184790 vs. ExPASy Swiss-Prot
Match: PLT4_ARATH (Probable polyol transporter 4 OS=Arabidopsis thaliana GN=PLT4 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 7.018e-41
Identity = 86/169 (50.89%), Postives = 119/169 (70.41%), Query Frame = -1
Query:    8 AVVLYSPRIFEKAGIASSDKKLLATVAVGFVKTIFILVATFLLDKIGRRPLLLSSVAGMIASLATLAISLTVIDQSHKKMIWAIGLAISTVLSYVAFFSIGMGPITWVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLYASIASVAWVFFY 514
            A V YSP I ++AGI    K L ATVAVG  KT+FIL ATFL+D +GR+PLL  S  GM   L  L+ +LT + Q        I LA+  V   VAFFSIGMGP+ WV +SEI PL+LRAQ +++G + NRV SG+V+M+FLS+S+AIT+GG+FF+++ +++++ +F Y
Sbjct:  318 ATVYYSPEILKEAGIQDETKLLAATVAVGVTKTVFILFATFLIDSVGRKPLLYVSTIGMTLCLFCLSFTLTFLGQG----TLGITLALLFVCGNVAFFSIGMGPVCWVLTSEIFPLRLRAQASALGAVGNRVCSGLVAMSFLSVSRAITVGGTFFVFSLVSALSVIFVY 482          
BLAST of CN184790 vs. ExPASy Swiss-Prot
Match: ERDL6_ARATH (Sugar transporter ERD6-like 6 OS=Arabidopsis thaliana GN=At1g75220 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.123e-21
Identity = 62/169 (36.69%), Postives = 94/169 (55.62%), Query Frame = -1
Query:   14 VVLYSPRIFEKAGIASSDKKLLATVAVGFVKTIFILVATFLLDKIGRRPLLLSSVAGMIASLATLAISLTV---IDQSHKKMIWAIGLAISTVLSYVAFFSIGMGPITWVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLYASIASVAWVF 511
            V+ YS  IFE AG+ SS+    AT  VG ++ +   ++T+L+DK GRR LL  S  GM  SL  +A +  +   +        W   L++  V++ V FFS+GMGPI W+  SEILP+ ++    SI  + N   S +++MT  +L  A + GG+F LY  + +   VF
Sbjct:  302 VLFYSSTIFESAGVTSSNA---ATFGVGAIQVVATAISTWLVDKAGRRLLLTISSVGMTISLVIVAAAFYLKEFVSPDSDMYSWLSILSVVGVVAMVVFFSLGMGPIPWLIMSEILPVNIKGLAGSIATLANWFFSWLITMT-ANLLLAWSSGGTFTLYGLVCAFTVVF 466          
BLAST of CN184790 vs. ExPASy Swiss-Prot
Match: YWTG_BACSU (Putative metabolite transport protein ywtG OS=Bacillus subtilis GN=ywtG PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 6.177e-21
Identity = 55/166 (33.13%), Postives = 91/166 (54.82%), Query Frame = -1
Query:   14 VVLYSPRIFEKAGIASSDKKLLATVAVGFVKTIFILVATFLLDKIGRRPLLLSSVAGMIASLATLAISLTVIDQSHKKMIWAIGLAISTVLSYVAFFSIGMGPITWVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLYASIASVAWVF 511
            ++ Y+P+ F   G  +S   +L TV +G V  +  LVA  ++DKIGR+PLLL   AGM+ SL  LA+     D +     W   + +     ++  F++  GP+ WV   E+ PL +R  G  +  ++  V + +VS+T+  L +AI I   F +YA+I  +A++F
Sbjct:  259 IIYYAPKTFTNVGFGNS-ASILGTVGIGTVNVLMTLVAIKIIDKIGRKPLLLFGNAGMVISLIVLALVNLFFDNTPAAS-WTTVICLGV---FIVVFAVSWGPVVWVMLPELFPLHVRGIGTGVSTLMLHVGTLIVSLTYPILMEAIGISYLFLIYAAIGIMAFLF 419          
BLAST of CN184790 vs. ExPASy Swiss-Prot
Match: EDL16_ARATH (Sugar transporter ERD6-like 16 OS=Arabidopsis thaliana GN=At5g18840 PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 4.004e-20
Identity = 59/163 (36.20%), Postives = 88/163 (53.99%), Query Frame = -1
Query:   14 YSPRIFEKAGIASSDKKLLATVAVGFVKTIFILVATFLLDKIGRRPLLLSSVAGMIASLATLAISLTVIDQSHKKMIWAIGLAISTVLSYVAFFSIGMGPITWVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLYASIASVAWVF 502
            Y+   F KAG  S     L T+A+  V+    ++ T L+DK GRRPL++ S  G+         S  +  QS   + W   LA+  VL YVA FSIGMGP+ WV  SEI P+ ++    S+ V+VN   +  VS TF +   + +  G+F+LY++ A+   +F
Sbjct:  301 YASETFVKAGFTSGK---LGTIAIACVQVPITVLGTILIDKSGRRPLIMISAGGIFLGCILTGTSFLLKGQS-LLLEWVPSLAVGGVLIYVAAFSIGMGPVPWVIMSEIFPINVKGIAGSLVVLVNWSGAWAVSYTF-NFLMSWSSPGTFYLYSAFAAATIIF 458          
BLAST of CN184790 vs. ExPASy Swiss-Prot
Match: ERDL4_ARATH (Sugar transporter ERD6-like 4 OS=Arabidopsis thaliana GN=At1g19450 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 8.920e-20
Identity = 64/170 (37.65%), Postives = 99/170 (58.24%), Query Frame = -1
Query:   14 VVLYSPRIFEKAGIASSDKKLLATVAVGFVKTIFILVATFLLDKIGRRPLLLSSVAGMIASLATLAISLT----VIDQSHKKMIWAIGLAISTVLSYVAFFSIGMGPITWVYSSEILPLKLRAQGASIGVMVNRVTSGVVSMTFLSLSKAITIGGSFFLYASIASVAWVF 511
            V+ YS  IFE AG+ SS+   +AT  VG V+ +   +AT+L+DK GRR LL+ S  GM  SL  +A++      V   S+   I ++ +++  V++ V   S+GMGPI W+  SEILP+ ++    SI  ++N   S +V+MT  ++  A + GG+F LYA +     VF
Sbjct:  303 VLFYSSTIFESAGVTSSN---VATFGVGVVQVVATGIATWLVDKAGRRLLLMISSIGMTISLVIVAVAFYLKEFVSPDSNMYNILSM-VSVVGVVAMVISCSLGMGPIPWLIMSEILPVNIKGLAGSIATLLNWFVSWLVTMT-ANMLLAWSSGGTFTLYALVCGFTVVF 467          
The following BLAST results are available for this feature:
BLAST of CN184790 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
PLT5_ARATH7.706e-6470.00Polyol transporter 5 OS=Arabidopsis thaliana GN=PL... [more]
PLT3_ARATH4.528e-5663.31Probable polyol transporter 3 OS=Arabidopsis thali... [more]
PLT2_ARATH4.528e-5661.99Putative polyol transporter 2 OS=Arabidopsis thali... [more]
PLT1_ARATH5.914e-5661.99Putative polyol transporter 1 OS=Arabidopsis thali... [more]
PLT6_ARATH5.535e-5460.36Probable polyol transporter 6 OS=Arabidopsis thali... [more]
PLT4_ARATH7.018e-4150.89Probable polyol transporter 4 OS=Arabidopsis thali... [more]
ERDL6_ARATH2.123e-2136.69Sugar transporter ERD6-like 6 OS=Arabidopsis thali... [more]
YWTG_BACSU6.177e-2133.13Putative metabolite transport protein ywtG OS=Baci... [more]
EDL16_ARATH4.004e-2036.20Sugar transporter ERD6-like 16 OS=Arabidopsis thal... [more]
ERDL4_ARATH8.920e-2037.65Sugar transporter ERD6-like 4 OS=Arabidopsis thali... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006B19_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006B19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184790 ID=CN184790; Name=CN184790; organism=Citrus sinensis; type=EST; length=514bp
GACACGTGTAGAAAAACACCCACGCAACTGATGCAATTGACGCGTATAGA
AAGAAGGAGCCGCCAATCGTGATCGCTTTACTAAGCGATAGGAAAGTCAT
CGATACGACCCCACTTGTTACCCTGTTTACCATGACCCCGATACTCGCTC
CCTGAGCGCGTAGCTTCAACGGCAGAATCTCTGAACTGTAAACCCACGTG
ATGGGACCCATCCCGATTGAGAAAAACGCCACGTAGGATAAAACCGTTGA
GATGGCCAAACCAATAGCCCAGATCATCTTTTTGTGTGACTGATCTATGA
CTGTGAGAGAGATAGCAAGGGTCGCGAGCGAGGCGATCATGCCCGCAACA
CTGCTCAAAAGCAACGGACGCCGTCCGATTTTGTCGAGTAAAAACGTAGC
CACTAGGATGAAAATGGTCTTGACAAATCCAACGGCTACAGTAGCGAGCA
ACTTTTTGTCTGATGACGCAATCCCAGCTTTTTCAAAGATTCTAGGACTG
TACAGAACGACAGC
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