CN184771

Overview
NameCN184771
Unique NameCN184771
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length737
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8110 contig Csv1_Contig8110:684..1420. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN184771 vs. ExPASy Swiss-Prot
Match: MTDH_FRAAN (Probable mannitol dehydrogenase OS=Fragaria ananassa GN=CAD PE=2 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 1.945e-69
Identity = 131/158 (82.91%), Postives = 144/158 (91.14%), Query Frame = -2
Query:  218 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMK 691
            KFAKAMGVKVTVISTSP K+ EA++ LGADSFLVSRDQD+MQAA+GTMDGIIDTVSA HPL+PLIGLL S GKLV+VGAPEKPLELP F LLMGRK+V GS IGGMKETQEMIDFAA+HNI ADIEVIP DY+NTA+ERL KADVRYRFVID+ NT+K
Sbjct:  199 KFAKAMGVKVTVISTSPKKEEEALKHLGADSFLVSRDQDQMQAAIGTMDGIIDTVSAQHPLLPLIGLLNSHGKLVMVGAPEKPLELPVFPLLMGRKMVAGSGIGGMKETQEMIDFAARHNITADIEVIPIDYLNTAMERLVKADVRYRFVIDIGNTLK 356          
BLAST of CN184771 vs. ExPASy Swiss-Prot
Match: MTDH_MESCR (Probable mannitol dehydrogenase OS=Mesembryanthemum crystallinum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 1.180e-66
Identity = 121/159 (76.10%), Postives = 143/159 (89.94%), Query Frame = -2
Query:  215 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKS 691
            KF KA G KVTVISTSP+KK EA+ RLGADSF+VSR+ ++MQ+AMGT+DGIIDTVSA HPL+PL+GLLKSQGK+++VG P+KPLELP F LL GRKI+ GS IGGMKETQEMIDFAAKH+I++DIEV+P DYVNTA+ERL K DVRYRFVIDVANT+K+
Sbjct:  202 KFGKAFGAKVTVISTSPNKKDEAVNRLGADSFVVSREPEQMQSAMGTLDGIIDTVSAAHPLLPLLGLLKSQGKMIMVGVPDKPLELPVFPLLQGRKILAGSCIGGMKETQEMIDFAAKHDIKSDIEVVPMDYVNTAMERLLKGDVRYRFVIDVANTLKA 360          
BLAST of CN184771 vs. ExPASy Swiss-Prot
Match: CADH7_ARATH (Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis thaliana GN=CAD7 PE=1 SV=2)

HSP 1 Score: 248.825 bits (634), Expect = 2.225e-65
Identity = 123/161 (76.40%), Postives = 142/161 (88.20%), Query Frame = -2
Query:  209 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKSTP 691
            KFAKAMG KVTVISTS  K+ EA+ RLGAD+FLVSRD  +M+ AMGTMDGIIDTVSA HPL+PL+GLLK++GKLV+VGAP +PLELP F L+ GRK+V GSM+GG+KETQEM+D A KHNI ADIE+I ADYVNTA+ERLAKADV+YRFVIDVANTMK TP
Sbjct:  197 KFAKAMGTKVTVISTSERKRDEAVTRLGADAFLVSRDPKQMKDAMGTMDGIIDTVSATHPLLPLLGLLKNKGKLVMVGAPAEPLELPVFPLIFGRKMVVGSMVGGIKETQEMVDLAGKHNITADIELISADYVNTAMERLAKADVKYRFVIDVANTMKPTP 357          
BLAST of CN184771 vs. ExPASy Swiss-Prot
Match: MTDH_PETCR (Mannitol dehydrogenase (Fragment) OS=Petroselinum crispum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 5.481e-64
Identity = 120/159 (75.47%), Postives = 139/159 (87.42%), Query Frame = -2
Query:  215 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKS 691
            K AKA G  VTVISTS SKK EA+E+LGAD FLVS D D+MQAA GT+ GIIDTVSA+HP++PL+GLLK  GKLV+VGAPEKPLELP F LLMGRK++ GS IGG+KETQEM+DFAA+HNI AD+EVIP DYVNTA+ERL K+DVRYRFVIDVANT+K+
Sbjct:  178 KMAKAFGAHVTVISTSESKKQEALEKLGADEFLVSSDSDQMQAATGTLHGIIDTVSALHPVVPLLGLLKVNGKLVMVGAPEKPLELPVFPLLMGRKVLAGSNIGGLKETQEMLDFAAQHNITADVEVIPVDYVNTAMERLVKSDVRYRFVIDVANTIKT 336          
BLAST of CN184771 vs. ExPASy Swiss-Prot
Match: CADH8_ARATH (Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis thaliana GN=CAD8 PE=1 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.034e-62
Identity = 122/161 (75.78%), Postives = 137/161 (85.09%), Query Frame = -2
Query:  209 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKSTP 691
            KFAKAMG KVTVISTS  K+ EAI RLGAD+FLVSRD  +++ AMGTMDGIIDTVSA H L+PL+GLLK +GKLV+VGAPEKPLELP   L+  RK+V GSMIGG+KETQEMID A KHNI ADIE+I ADYVNTA+ERL KADVRYRFVIDVANT+K  P
Sbjct:  197 KFAKAMGTKVTVISTSEKKRDEAINRLGADAFLVSRDPKQIKDAMGTMDGIIDTVSATHSLLPLLGLLKHKGKLVMVGAPEKPLELPVMPLIFERKMVMGSMIGGIKETQEMIDMAGKHNITADIELISADYVNTAMERLEKADVRYRFVIDVANTLKPNP 357          
BLAST of CN184771 vs. ExPASy Swiss-Prot
Match: MTDH3_STYHU (Probable mannitol dehydrogenase 3 OS=Stylosanthes humilis GN=CAD3 PE=2 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 5.672e-61
Identity = 115/161 (71.43%), Postives = 141/161 (87.58%), Query Frame = -2
Query:  212 KFAKAMGVKVTVISTSP-SKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKST 691
            KFAK  G+K+TVISTSP +KK EAI+ LGADSFLVSRD D+M+A   T+DGIIDTVSA H ++PLIGLLKS GKLVL+GA EKPLELP F L++GRK+VGG+++GG+KETQEMIDF+ KHN++ +IEV+P DYVN A++RLAKADV+YRFVIDVANT+K T
Sbjct:  202 KFAKTHGLKITVISTSPPTKKEEAIKNLGADSFLVSRDPDQMEAPKETLDGIIDTVSADHSIVPLIGLLKSHGKLVLIGAIEKPLELPPFPLILGRKLVGGTLVGGLKETQEMIDFSPKHNVKPEIEVVPMDYVNIAMQRLAKADVKYRFVIDVANTLKPT 362          
BLAST of CN184771 vs. ExPASy Swiss-Prot
Match: MTDH_APIGR (Mannitol dehydrogenase OS=Apium graveolens GN=MTD PE=1 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 2.017e-58
Identity = 109/159 (68.55%), Postives = 133/159 (83.65%), Query Frame = -2
Query:  215 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKS 691
            K AKA G +VTVI  S SK+ EA+E+LGADSFL++ DQ++M+ A  ++DGIIDTV   HPL PL  LLK  GKLV+VGAPEKP ELP FSLL GRK++GG++ GG+KETQEM+DFAAKHNI AD+EVIP DYVNTA+ERL K+DVRYRFVID+ANTM++
Sbjct:  201 KMAKAFGAQVTVIDISESKRKEALEKLGADSFLLNSDQEQMKGARSSLDGIIDTVPVNHPLAPLFDLLKPNGKLVMVGAPEKPFELPVFSLLKGRKLLGGTINGGIKETQEMLDFAAKHNITADVEVIPMDYVNTAMERLVKSDVRYRFVIDIANTMRT 359          
BLAST of CN184771 vs. ExPASy Swiss-Prot
Match: MTDH_MEDSA (Probable mannitol dehydrogenase OS=Medicago sativa GN=CAD1 PE=1 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 3.441e-58
Identity = 112/159 (70.44%), Postives = 133/159 (83.65%), Query Frame = -2
Query:  215 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKS 691
            KF KA G+KVTVISTSP+K++EAI++LGADSFLVS+D ++M+AAMGTMD IIDT+SA H LMPL+GLLK  GKLV VG P KPLEL  F L+ GRK++GGS IGGMKETQEM+DF  KHNI ADIE+I    +NTA+ERL KADV+YRFVIDVAN+  S
Sbjct:  200 KFGKAFGLKVTVISTSPNKETEAIDKLGADSFLVSKDPEKMKAAMGTMDYIIDTISAAHSLMPLLGLLKLNGKLVTVGLPSKPLELSVFPLVAGRKLIGGSNIGGMKETQEMLDFCGKHNITADIELIKMHEINTAMERLHKADVKYRFVIDVANSFSS 358          
BLAST of CN184771 vs. ExPASy Swiss-Prot
Match: CADH6_ARATH (Probable cinnamyl alcohol dehydrogenase 6 OS=Arabidopsis thaliana GN=CAD6 PE=2 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 5.869e-58
Identity = 108/160 (67.50%), Postives = 136/160 (85.00%), Query Frame = -2
Query:  212 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKST 691
            +FAKA G KVTV+S++  K  +A++ LGAD FLVS D+D+M+AAMGTMDGIIDTVSA H + PLIGLLKS GKLVL+GA EKP ++ AFSL++GRK + GS IGGM+ETQEMIDFAA+H I+A+IE+I  DYVNTA++RLAK DVRYRFVID++NT+ +T
Sbjct:  202 RFAKAFGTKVTVVSSTTGKSKDALDTLGADGFLVSTDEDQMKAAMGTMDGIIDTVSASHSISPLIGLLKSNGKLVLLGATEKPFDISAFSLILGRKSIAGSGIGGMQETQEMIDFAAEHGIKAEIEIISMDYVNTAMDRLAKGDVRYRFVIDISNTLAAT 361          
BLAST of CN184771 vs. ExPASy Swiss-Prot
Match: GEDH1_OCIBA (Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GEDH1 PE=1 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 6.489e-57
Identity = 106/158 (67.09%), Postives = 132/158 (83.54%), Query Frame = -2
Query:  218 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMK 691
            KFAKA G KVTVISTS SKK EA++ LG D F+VS D  +MQAA+GT+DGIIDTVSA HP++PL+ LLK  GKL++VG P+KPL+LP F L+ GR+ + GS IGG+KETQEMIDFAAK+NI AD+EVIP DY+NTA++RL K+DV+YRFVIDV  ++K
Sbjct:  201 KFAKAFGTKVTVISTSLSKKEEAMQHLGVDEFVVSTDPQQMQAAVGTLDGIIDTVSAPHPIVPLLSLLKPHGKLIVVGLPDKPLQLPVFPLIQGRRTIAGSGIGGLKETQEMIDFAAKNNIVADVEVIPIDYINTAMDRLLKSDVKYRFVIDVEKSLK 358          
The following BLAST results are available for this feature:
BLAST of CN184771 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
MTDH_FRAAN1.945e-6982.91Probable mannitol dehydrogenase OS=Fragaria ananas... [more]
MTDH_MESCR1.180e-6676.10Probable mannitol dehydrogenase OS=Mesembryanthemu... [more]
CADH7_ARATH2.225e-6576.40Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis th... [more]
MTDH_PETCR5.481e-6475.47Mannitol dehydrogenase (Fragment) OS=Petroselinum ... [more]
CADH8_ARATH1.034e-6275.78Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis th... [more]
MTDH3_STYHU5.672e-6171.43Probable mannitol dehydrogenase 3 OS=Stylosanthes ... [more]
MTDH_APIGR2.017e-5868.55Mannitol dehydrogenase OS=Apium graveolens GN=MTD ... [more]
MTDH_MEDSA3.441e-5870.44Probable mannitol dehydrogenase OS=Medicago sativa... [more]
CADH6_ARATH5.869e-5867.50Probable cinnamyl alcohol dehydrogenase 6 OS=Arabi... [more]
GEDH1_OCIBA6.489e-5767.09Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006B04_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184771 ID=CN184771; Name=CN184771; organism=Citrus sinensis; type=EST; length=737bp
GAGGGTAAAAACTAACATATAGCTCGCTATTACATAAATTTGTCACACAG
ATGGAATATACGTCACCAAATTATTATTCTTAAAAAGCAAAAACAGATTT
GAAATCACAACAAAAGACTAACATAATCTAAAACTTAGACGATGTTGTGA
CTCGACAATAAACGCACATTCCTCATTTTAAGCGCAACTCAAAAGGAAGA
AAATTTTAAGGGGTGGACTTCATTGTGTTTGCAACGTCGATGACAAAGCG
ATATCTAACATCGGCTTTAGCAAGGCGCTCCAGGGCTGTGTTCACATAGT
CGGCCGGTATGACCTCAATATCAGCTCTGATGTTGTGTTTTGCCGCAAAA
TCAATCATCTCTTGAGTCTCCTTCATCCCCCCAATCATGCTGCCACCAAC
TATCTTCCTCCCCATGAGCAGGGAGAAAGCTGGTAGCTCCAGTGGCTTCT
CTGGTGCACCAACAAGTACAAGCTTTCCTTGAGATTTCAACAGTCCAATC
AACGGCATTAGAGGGTGAACTGCAGATACTGTATCGATAATACCATCCAT
TGTGCCCATGGCAGCCTGCATCTCATCTTGATCACGACTGACCAAAAAGG
AATCAGCGCCAAGACGTTCAATGGCTTCACTCTTCTTGCTAGGGGAGGTA
CTGATCACAGTCACCTTGACCCCCATAGCCTTTGCGAATTTGACGGCGAC
ATGGCCTAGACCGCCCAAGCCGACAACACCCACATGC
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