CN184746
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN184746 vs. ExPASy Swiss-Prot
Match: CF106_DANRE (Uncharacterized protein C6orf106 homolog OS=Danio rerio GN=zgc:101577 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 9.049e-16 Identity = 38/108 (35.19%), Postives = 63/108 (58.33%), Query Frame = 1 Query: 385 FILDVNVLDGTMMAPSTPFTKIWRMRNTGNLAWPRGSQLVWIGGDKFSDGVSVEIEVPADGVPVEGEIDIAVDFTAPELPGRYISYWRMSSPSGVKFGQRVWVLIQVD 708 F+ DV + +G + P TPFTK WR++NTG +WP G L ++GGD+F V + + + D++V +P +PG Y WRM + +G+ +G +WV++ V+ Sbjct: 77 FVEDVTIGEGESVPPDTPFTKTWRIQNTGTESWPPGVCLKYVGGDQFGHVNMVMVR----SLDPQEISDVSVQMRSPAVPGMYQGQWRMCTATGLFYGDVIWVILSVE 180
BLAST of CN184746 vs. ExPASy Swiss-Prot
Match: NBR1_PONAB (Next to BRCA1 gene 1 protein OS=Pongo abelii GN=NBR1 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.307e-14 Identity = 65/222 (29.28%), Postives = 100/222 (45.05%), Query Frame = 1 Query: 82 VRCDGCGVHPITGPRFKSKVKDDYDLCSICFAA-MGSEADYI--RIDRPV--------HYQYRHPRPFRGLYDHNFWLGTPGPDTQHVGALGAPHILRDRGIKPGRSRLDSCFILDVNVLDGTMMAPSTPFTKIWRMRNTGNLAWPRGSQLVWIGGD-KFSDGVSVEIEVPADGVPVEGEIDIAVDFTAPELPGRYISYWRMSSPSGVKFGQRVWVLIQVDP 711 + C+ C I G R++ + Y++C C A G + +++ ++ RPV H +Y PR L L + P L + F+ D N+ DGT + P T F K WRM+NTGN+ W ++L ++ G+ + ++ VP G ++V+F AP L G Y S+WR+S G +FG RVW I VDP Sbjct: 215 IACNNCQ-RRIVGVRYQCSLCPSYNICEDCEAGPYGHDTNHVLLKLRRPVVGSSEPFCHSKYSTPRLPAALEQVRLPL---------------------QPCTPVMPTLSAAFV-DENLPDGTHLQPGTKFIKHWRMKNTGNVKWSADTKLKFMWGNLTLASTEKKDVLVPCLKAGHVGV--VSVEFIAPALEGTYTSHWRLSH-KGQQFGPRVWCSIIVDP 410
BLAST of CN184746 vs. ExPASy Swiss-Prot
Match: CF106_CHICK (Uncharacterized protein C6orf106 homolog OS=Gallus gallus GN=RCJMB04_11e11 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.485e-14 Identity = 36/108 (33.33%), Postives = 59/108 (54.63%), Query Frame = 1 Query: 385 FILDVNVLDGTMMAPSTPFTKIWRMRNTGNLAWPRGSQLVWIGGDKFSDGVSVEIEVPADGVPVEGEIDIAVDFTAPELPGRYISYWRMSSPSGVKFGQRVWVLIQVD 708 F+ DV + +G + P T FTK WR++NTG WP G L ++GGD+F V + + + D++V +P G Y WRM + +G+ +G +WV++ V+ Sbjct: 77 FVEDVTIGEGESIPPDTQFTKTWRIQNTGTEVWPPGVCLKYVGGDQFGHVNMVMVR----SLEPQEIADVSVQMCSPSTAGMYQGQWRMCTATGLYYGDVIWVILSVE 180
BLAST of CN184746 vs. ExPASy Swiss-Prot
Match: NBR1_MOUSE (Next to BRCA1 gene 1 protein OS=Mus musculus GN=Nbr1 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.445e-13 Identity = 46/124 (37.10%), Postives = 65/124 (52.42%), Query Frame = 1 Query: 379 SCFILDVNVLDGTMMAPSTPFTKIWRMRNTGNLAWPRGSQLVWIGGD-KFSDGVSVEIEVPADGVPVEGEIDIAVDFTAPELPGRYISYWRMSSPSGVKFGQRVWVLIQVDPSLKDSISDGFGG 747 S +D N+ DGT + P T F K WRM+NTGN+ W ++L ++ G+ + ++ VP G ++V+F AP L G Y S+WR+S G +FG RVW I VDP D G Sbjct: 373 SAAFVDENLPDGTHLQPGTKFIKHWRMKNTGNVKWNTDTKLKFMWGNLTLASTEKKDVLVPCLKAGHVGV--VSVEFIAPTLEGTYTSHWRLSH-KGQQFGPRVWCSIIVDPFPSSESPDNVEG 493
BLAST of CN184746 vs. ExPASy Swiss-Prot
Match: NBR1_HUMAN (Next to BRCA1 gene 1 protein OS=Homo sapiens GN=NBR1 PE=1 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.445e-13 Identity = 44/112 (39.29%), Postives = 63/112 (56.25%), Query Frame = 1 Query: 379 SCFILDVNVLDGTMMAPSTPFTKIWRMRNTGNLAWPRGSQLVWIGGD-KFSDGVSVEIEVPADGVPVEGEIDIAVDFTAPELPGRYISYWRMSSPSGVKFGQRVWVLIQVDP 711 S +D N+ DGT + P T F K WRM+NTGN+ W ++L ++ G+ + ++ VP G ++V+F AP L G Y S+WR+S G +FG RVW I VDP Sbjct: 372 SAAFVDENLPDGTHLQPGTKFIKHWRMKNTGNVKWSADTKLKFMWGNLTLASTEKKDVLVPCLKAGHVGV--VSVEFIAPALEGTYTSHWRLSH-KGQQFGPRVWCSIIVDP 480
BLAST of CN184746 vs. ExPASy Swiss-Prot
Match: CF106_HUMAN (Uncharacterized protein C6orf106 OS=Homo sapiens GN=C6orf106 PE=1 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 5.490e-13 Identity = 35/108 (32.41%), Postives = 59/108 (54.63%), Query Frame = 1 Query: 385 FILDVNVLDGTMMAPSTPFTKIWRMRNTGNLAWPRGSQLVWIGGDKFSDGVSVEIEVPADGVPVEGEIDIAVDFTAPELPGRYISYWRMSSPSGVKFGQRVWVLIQVD 708 F+ DV + +G + P T F K WR++N+G AWP G L ++GGD+F V + + + D++V +P G Y WRM + +G+ +G +WV++ V+ Sbjct: 77 FVEDVTIGEGESIPPDTQFVKTWRIQNSGAEAWPPGVCLKYVGGDQFGHVNMVMVR----SLEPQEIADVSVQMCSPSRAGMYQGQWRMCTATGLYYGDVIWVILSVE 180
BLAST of CN184746 vs. ExPASy Swiss-Prot
Match: NBR1_RAT (Next to BRCA1 gene 1 protein OS=Rattus norvegicus GN=Nbr1 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 9.364e-13 Identity = 43/112 (38.39%), Postives = 62/112 (55.36%), Query Frame = 1 Query: 379 SCFILDVNVLDGTMMAPSTPFTKIWRMRNTGNLAWPRGSQLVWIGGD-KFSDGVSVEIEVPADGVPVEGEIDIAVDFTAPELPGRYISYWRMSSPSGVKFGQRVWVLIQVDP 711 S +D N+ DGT + P T F K WRM+NTGN+ W ++L ++ G+ + ++ VP G ++V+F AP L G Y +WR+S G +FG RVW I VDP Sbjct: 374 SAAFVDENLPDGTHLQPGTKFIKHWRMKNTGNVKWSADTKLKFMWGNLTLASTEKKDVLVPCLKAGHIGV--VSVEFIAPTLEGTYTLHWRLSH-KGQQFGPRVWCSIIVDP 482
BLAST of CN184746 vs. ExPASy Swiss-Prot
Match: CF106_MOUSE (Uncharacterized protein C6orf106 homolog OS=Mus musculus GN=D17Wsu92e PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.711e-11 Identity = 33/108 (30.56%), Postives = 57/108 (52.78%), Query Frame = 1 Query: 385 FILDVNVLDGTMMAPSTPFTKIWRMRNTGNLAWPRGSQLVWIGGDKFSDGVSVEIEVPADGVPVEGEIDIAVDFTAPELPGRYISYWRMSSPSGVKFGQRVWVLIQVD 708 F+ DV + +G + P T F K WR++N+G AWP G L ++GGD+F V + + + D++V + G Y WRM + +G+ + +WV++ V+ Sbjct: 77 FVEDVTIGEGESIPPDTQFIKTWRIQNSGAEAWPTGVCLKYVGGDQFGHVNMVMVR----SLEPQEIADVSVQMCSLSRAGMYQGQWRMCTDTGLYYEDVIWVILSVE 180 The following BLAST results are available for this feature:
BLAST of CN184746 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN184746 ID=CN184746; Name=CN184746; organism=Citrus sinensis; type=EST; length=839bpback to top |