CN184737

Overview
NameCN184737
Unique NameCN184737
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184737 vs. ExPASy Swiss-Prot
Match: U483_AEDAE (UPF0483 protein AAEL000016 OS=Aedes aegypti GN=AAEL000016 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.288e-17
Identity = 70/222 (31.53%), Postives = 107/222 (48.20%), Query Frame = 1
Query:  172 KPRILCLHGFRTSGEILKKQIGRWPESILRKLDLDFLDAPF--PALGKSDVEAFFDPPYYEWYQRNEDCT--------QYINFEQSIAYIEDYMVTHGPFDGLLGFSQGAFIAAASPGMQAEGVAFTKVPKIKFVILIAGAKFLGFKFGQPKLAVNAFSSPVQCPSLHIIGENDFL--KEQGMVLLESFVDPVVIYHSKGHTIPRIDERGQETMLSFIQKFQ 801
            K +IL LHG+R +G+  K ++G + + I +  +L F+ AP   P L  S+     DP    W+   +D T          I FE S+  +E  +       GLLGFSQGA        + A G+   K    +F +L +     GF+ G   + +N + + VQ PSLHI GE D +  KE  M L ++F DP ++ H  GH +P    + Q  +  F ++ Q
Sbjct:   24 KLKILALHGYRQNGDGFKSKLGSFRKFIGKHAELVFVTAPHIAPPLPDSEAGTEPDPAQRSWWFNKDDGTFKGTNKNGPAIGFEDSLKLVEK-VWKQEQCCGLLGFSQGACFVGLLCDLSARGMTSIKP---EFAVLSS-----GFRSGS-LVHLNCYETKVQIPSLHIYGEADEIIPKEMSMALADTFTDPQILTHPGGHFLPAQASQKQTYVEFFRERLQ 235          
BLAST of CN184737 vs. ExPASy Swiss-Prot
Match: U483_DROPS (UPF0483 protein GA18864 OS=Drosophila pseudoobscura pseudoobscura GN=GA18864 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.392e-17
Identity = 64/221 (28.96%), Postives = 106/221 (47.96%), Query Frame = 1
Query:  163 IPKKPRILCLHGFRTSGEILKKQIGRWPESILRKLDLDFLDAPFPALG-KSDVEAFFDPPYYEWYQRNEDCT--------QYINFEQSIAYIEDYMVTHGPFDGLLGFSQGAFIAAASPGMQAEGVAFTKVPKIKFVILIAGAKFLGFKFGQPKLAVNAFSSPVQCPSLHIIGENDFL--KEQGMVLLESFVDPVVIYHSKGHTIPRIDERGQETMLSFIQ 792
            I +K R+LCLHG+R  G+  K ++G + +   +  +  F+ AP  A   +S  E    P    W+   +D T            F+ S+  +E+   T GPF GLLGFSQGA       G+  + +   +    +F +L +     GF  G   + ++A+  PV  P+LHI G +D +  K+   +L   F +  V+ H  GH  P   ++ ++T ++F Q
Sbjct:   27 ITEKVRVLCLHGYRQDGDAFKNKLGSFRKFTSKYAEFVFISAPHIAAPLESAAEPV--PEQRSWWANKDDGTFKGTNKGGPAFGFQDSLRLVEEAWKTQGPFQGLLGFSQGACFVGLICGLAKKKLTSIRP---EFAVLSS-----GFVSGS-LVHMSAYEEPVSIPTLHIYGSSDEIIPKDMSALLASHFKNVEVLEHGGGHYFPATAQQ-KQTYINFFQ 235          
BLAST of CN184737 vs. ExPASy Swiss-Prot
Match: U483_DROME (UPF0483 protein CG5412 OS=Drosophila melanogaster GN=CG5412 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.392e-17
Identity = 68/243 (27.98%), Postives = 115/243 (47.33%), Query Frame = 1
Query:  100 AAAEKLEKFKKINRETIMENGIPKKPRILCLHGFRTSGEILKKQIGRWPESILRKLDLDFLDAPFPALG-KSDVEAFFDPPYYEWYQRNEDCT--------QYINFEQSIAYIEDYMVTHGPFDGLLGFSQGA-FIAAASPGMQAEGVAFTKVPKIKFVILIAGAKFLGFKFGQPKLAVNAFSSPVQCPSLHIIGENDFL--KEQGMVLLESFVDPVVIYHSKGHTIPRIDERGQETMLSFIQ 792
            AA E     +  + +  ++  I +K R+LCLHG+R +GE  K ++G + +   +  +  F+ AP  A   +S  E    P    W+   +D +            F++S+  +E+   T GPF GLLGFSQGA F+          G+A  K+  I+    +  + FL        + ++A+   +  P+LHI G+ D +  KE    L   F +  V+ HS GH  P   ++ ++T ++F Q
Sbjct:    6 AAVEAAGSSRASSSKQQLKLEITEKVRVLCLHGYRQNGEAFKNKLGSFRKFANKYAEFVFITAPHVAKALESAAEPV--PEQRSWWANKDDGSFKGTNKGGPAFGFQESLRCVEEAWRTQGPFQGLLGFSQGACFVGLIC------GLAKKKLTSIRPEFAVLASGFLSGSL----VHMSAYEEAISIPTLHIYGQTDEIIPKEMSESLAARFKNAEVLEHSGGHYFPATAQQ-KQTFINFFQ 235          
BLAST of CN184737 vs. ExPASy Swiss-Prot
Match: U483_ANOGA (UPF0483 protein AGAP003155 OS=Anopheles gambiae GN=AGAP003155 PE=3 SV=3)

HSP 1 Score: 87.8113 bits (216), Expect = 8.349e-17
Identity = 61/203 (30.05%), Postives = 97/203 (47.78%), Query Frame = 1
Query:  169 KKPRILCLHGFRTSGEILKKQIGRWPESILRKLDLDFLDAPFPALGKSDVEAFFDPPYYEWYQRNEDCT--------QYINFEQSIAYIEDYMVTHGPFDGLLGFSQGAFIAAASPGMQAEGVAFTKVPKIKFVILIAGAKFLGFKFGQPKLAVNAFSSPVQCPSLHIIGEND--FLKEQGMVLLESFVDPVVIYHSKGHTIP 747
            +K ++L LHG+R + +  K ++G + + + + ++  F+ AP PA     V    DP    W+   +D T            F++S+  +E      G   GLLGFSQGA        + A G+      K +F ++ +     GF+ G   + +N + + VQ PSLHI GE D    K+    L E+F+DP V+ H  GH  P
Sbjct:   10 EKLKVLALHGYRQNADSFKSKLGSFRKMLNKYVEFVFVSAPHPAAPLEAVGGEPDPNQRSWWFNKDDRTFKGTNQGGPAYGFDESLRLVERTWQAEG-CHGLLGFSQGACFVGLLCDLSARGMT---TMKPQFAVVAS-----GFRSGS-LVHLNYYENKVQIPSLHIFGETDEIITKDMSEALAETFLDPEVVTHPGGHYFP 202          
BLAST of CN184737 vs. ExPASy Swiss-Prot
Match: OVCA2_DANRE (Ovarian cancer-associated gene 2 protein homolog OS=Danio rerio GN=ovca2 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.581e-15
Identity = 62/230 (26.96%), Postives = 108/230 (46.96%), Query Frame = 1
Query:  178 RILCLHGFRTSGEILKKQIGRWPESILRKLDLDFLDAPF--PALGK--------SDVEAFFDPPYYEW---------YQRNEDCTQYINFEQSIAYIEDYMVTHGPFDGLLGFSQGAFIAAASPGMQAEGVAFTKVPKIKFVILIAGAKFLGFKFGQPKLAVNAFSSPV-QCPSLHIIGENDFL--KEQGMVLLESFVDPVVIYHSKGHTIPRIDERGQETMLSFIQKFQ 801
            RILC+HG+R +G   +++ G   + + ++++L F+ AP   PA+ +        S   +  D     W         +   +DC   +  E+SI  ++  +   GPF G+LGFSQGA + A    +Q +          +F IL+AG +    +  +       +  PV   PSLH+ G++D +  +E    LL +F    V+ H  GH +P      ++T   F+++FQ
Sbjct:    7 RILCIHGYRQNGNSFREKTGALRKLLKKQVELVFISAPHQVPAIQEENCGTNQQSQTVSVGDEDQRGWWFSDVQARSFNAKQDCESSLGLEESIEAVKAALKDLGPFSGILGFSQGAALVAMLCALQEQ--KLEPDFNFRFAILVAGFRSACLEHQR------FYEGPVITIPSLHVFGQDDRVIPEEMSRDLLPAFDGAQVLLHPGGHFVPAASSH-RQTYQDFLKRFQ 227          
BLAST of CN184737 vs. ExPASy Swiss-Prot
Match: OVCA2_MOUSE (Ovarian cancer-associated gene 2 protein homolog OS=Mus musculus GN=Ovca2 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.021e-14
Identity = 65/226 (28.76%), Postives = 105/226 (46.46%), Query Frame = 1
Query:  178 RILCLHGFRTSGEILKKQIGRWPESILRKLDLDFLDAPFPALGKSDVEAFF---------DPPYYEWYQRNE--------DCTQYINFEQSIAYIEDYMVTHGPFDGLLGFSQGAFIAAASPGMQAEGVAFTKVPKIKFVILIAGAKFLGFKFGQPKLAVNAFSSPVQCPSLHIIGENDFL--KEQGMVLLESFVDPVVIYHSKGHTIPRIDERGQETMLSFIQKF 798
            R+LCL GFR S    +++ G   +++  + +L  L  P P    +  E            + P   W+   E        + T     ++++  +   + T GPFDGLLGFSQGA +AA    +   G    + P  +F+IL++G    G K  +P L      SP+  PSLH+ G+ D +   ++ M L   F+  V + HS GH IP    + ++  L F+ +F
Sbjct:    8 RVLCLAGFRQSERGFREKTGALRKTLRGRAELVCLSGPHPVPEAAAPEGSCPDSGPCSPEEQPRGWWFSEEEADVFSALEESTVCRGLQEALETVARALDTLGPFDGLLGFSQGAALAAYVCALGQAG--DPRFPLPRFIILVSGFCPRGLK--EPIL-----QSPMSLPSLHVFGDTDRVIPSQESMQLASRFLGAVTLTHSGGHFIPAAASQ-RQAYLKFLDQF 223          
BLAST of CN184737 vs. ExPASy Swiss-Prot
Match: OVCA2_BOVIN (Ovarian cancer-associated gene 2 protein homolog OS=Bos taurus GN=OVCA2 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.969e-14
Identity = 63/226 (27.88%), Postives = 101/226 (44.69%), Query Frame = 1
Query:  178 RILCLHGFRTSGEILKKQIGRWPESILRKLDLDFLDAPFPALGKSDVEAFF---------DPPYYEWYQRNE--------DCTQYINFEQSIAYIEDYMVTHGPFDGLLGFSQGAFIAAASPGMQAEGVAFTKVPKIKFVILIAGAKFLGFKFGQPKLAVNAFSSPVQCPSLHIIGENDFL--KEQGMVLLESFVDPVVIYHSKGHTIPRIDERGQETMLSFIQKF 798
            RILCL GFR S    +++ G   +++  + +L  L  P P +  +  E            + P   W+   E        + T     E+++  +   +   GPFDG+LGFSQGA +AA    +   G    + P  +FVIL++G    G    +P         P+  PSLH+ G+ D +   ++ M L   F   V + HS GH IP    + ++  L F+ +F
Sbjct:    8 RILCLAGFRQSERGFREKTGALRKALRGRAELVCLSGPHPVVDAAGSEGARPDSGPCPPEEQPQGWWFSEQEADVFLALEEPTACRGLEEALETVAQALNKLGPFDGILGFSQGAALAALVCALGQGG--DPRFPLPRFVILVSGFCPRGLGLMEP-----IMQGPLSLPSLHVFGDTDGVIPSQESMQLCSRFDGAVTLTHSGGHFIPAAAPQ-RQAYLKFLDQF 225          
BLAST of CN184737 vs. ExPASy Swiss-Prot
Match: DYR_SCHPO (Dihydrofolate reductase OS=Schizosaccharomyces pombe GN=dfr1 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 6.615e-14
Identity = 58/211 (27.49%), Postives = 99/211 (46.92%), Query Frame = 1
Query:  169 KKPRILCLHGFRTSGEILKKQIGRWPESILRKLDLDFLDAPFPALGKSDVEAFFDPPY------------YEWYQRNEDCTQYINFEQSIAYIEDYMVTHGPFDGLLGFSQGAFIAAASPGMQAEGV---AFTKVPKIKFVILIAGAKFLGFKFGQPKLAVNAFSSPVQCPSLHIIGENDFL--KEQGMVLLESFVDPVVIYHSKGHTIPR 750
            K  ++LCLHG+  SG +  K++G   + + +  +L F   P  A  ++D     +               + W++  +    Y ++++S+  I  YM   GPFDGL+GFSQGA I A    M   G     + + P  KFV+ +      GF+  +P+   + ++  +  PSLHI G +D L    +   L+E   +  V+ H   H +P+
Sbjct:    3 KPLKVLCLHGWIQSGPVFSKKMGSVQKYLSKYAELHFPTGPVVADEEADPNDEEEKKRLAALGGEQNGGKFGWFEVEDFKNTYGSWDESLECINQYMQEKGPFDGLIGFSQGAGIGAMLAQMLQPGQPPNPYVQHPPFKFVVFVG-----GFRAEKPEFD-HFYNPKLTTPSLHIAGTSDTLVPLARSKQLVERCENAHVLLHPGQHIVPQ 207          
BLAST of CN184737 vs. ExPASy Swiss-Prot
Match: U483_CAEEL (UPF0483 protein C25G4.2 OS=Caenorhabditis elegans GN=C25G4.2 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.639e-14
Identity = 62/224 (27.68%), Postives = 107/224 (47.77%), Query Frame = 1
Query:  172 KPRILCLHGFRTSGEILKKQIGRWPESILRKLDLDFLDAPFPALGKSDVEAFFDPPYYEWYQRNE-------DCTQY-INFEQSIAYIEDYMVTHGPFDGLLGFSQGA-----FIAAASPGMQAEGVAFTKVPKIKFVILIAGAKFLGFKFGQPKLAVNAFSSPVQCPSLHIIGENDFL--KEQGMVLLESF-VDPVVIYHSKGHTIPRIDERGQETMLSFIQK 795
            K RILCLHG+R   +  +++ G   + +    + +F++          V+   D     W+  NE       + T+  + FE+S+A +  ++  +GPFDGLLGFSQGA      IA A  G         K+P I+F I  +G  FL        L +       + PS+H+ G+ D +  + +   + + F V+P+ I H  GH +P + +  +E +  F+++
Sbjct:    6 KLRILCLHGYRQCDQSFRQKTGSTRKLVKSLAEFEFVNGVHSVA----VDEHVDSSRAWWFSNNEAMSFSSRESTEVAVGFEESVAAVVKFIEENGPFDGLLGFSQGASMVHLLIAKAQLGE-------IKLPGIRFAIFFSG--FLSLSSKHDSLTLLRIK---EFPSMHVFGDADEIVARPKSEKMADMFDVEPLRIAHDGGHVVPSMSKH-KEKIAGFMRE 212          
BLAST of CN184737 vs. ExPASy Swiss-Prot
Match: OVCA2_HUMAN (Ovarian cancer-associated gene 2 protein OS=Homo sapiens GN=OVCA2 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.514e-13
Identity = 62/228 (27.19%), Postives = 104/228 (45.61%), Query Frame = 1
Query:  178 RILCLHGFRTSGEILKKQIGRWPESILRKLDLDFLDAPFPAL---GKSDVEAFFD--PPYYE----WYQRNE--------DCTQYINFEQSIAYIEDYMVTHGPFDGLLGFSQGAFIAAASPGMQAEGVAFTKVPKIKFVILIAG--AKFLGFKFGQPKLAVNAFSSPVQCPSLHIIGENDFL--KEQGMVLLESFVDPVVIYHSKGHTIPRIDERGQETMLSFIQKF 798
            R+LCL GFR S    +++ G   +++  + +L  L  P P     G     + F   PP  +    W+   E        +       E+S+  +   +   GPFDGLLGFSQGA +AA    +   G    + P  +F++L++G   + +GFK        +    P+  PSLH+ G+ D +   ++ + L   F   + + HS GH IP    + ++  L F+ +F
Sbjct:    8 RVLCLAGFRQSERGFREKTGALRKALRGRAELVCLSGPHPVPDPPGPEGARSDFGSCPPEEQPRGWWFSEQEADVFSALEEPAVCRGLEESLGMVAQALNRLGPFDGLLGFSQGAALAALVCALGQAG--DPRFPLPRFILLVSGFCPRGIGFK-------ESILQRPLSLPSLHVFGDTDKVIPSQESVQLASQFPGAITLTHSGGHFIPAAAPQ-RQAYLKFLDQF 225          
The following BLAST results are available for this feature:
BLAST of CN184737 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
U483_AEDAE1.288e-1731.53UPF0483 protein AAEL000016 OS=Aedes aegypti GN=AAE... [more]
U483_DROPS6.392e-1728.96UPF0483 protein GA18864 OS=Drosophila pseudoobscur... [more]
U483_DROME6.392e-1727.98UPF0483 protein CG5412 OS=Drosophila melanogaster ... [more]
U483_ANOGA8.349e-1730.05UPF0483 protein AGAP003155 OS=Anopheles gambiae GN... [more]
OVCA2_DANRE4.581e-1526.96Ovarian cancer-associated gene 2 protein homolog O... [more]
OVCA2_MOUSE1.021e-1428.76Ovarian cancer-associated gene 2 protein homolog O... [more]
OVCA2_BOVIN2.969e-1427.88Ovarian cancer-associated gene 2 protein homolog O... [more]
DYR_SCHPO6.615e-1427.49Dihydrofolate reductase OS=Schizosaccharomyces pom... [more]
U483_CAEEL8.639e-1427.68UPF0483 protein C25G4.2 OS=Caenorhabditis elegans ... [more]
OVCA2_HUMAN2.514e-1327.19Ovarian cancer-associated gene 2 protein OS=Homo s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006A03_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006A03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184737 ID=CN184737; Name=CN184737; organism=Citrus sinensis; type=EST; length=853bp
GAGGGGGTCAATCACCATGGTTGGTCAAAATTAGCAGACAGCTTCGCCCA
TCAAGTAAATTCAGTGAAAATTCCACCACCACGCATGCATACTATTGTTG
CAGCAGCAGAGAAACTTGAGAAGTTCAAAAAAATTAACAGAGAAACCATA
ATGGAAAATGGAATCCCAAAAAAACCCAGAATTTTGTGTCTCCACGGATT
CAGGACAAGCGGCGAGATCCTCAAGAAACAAATAGGAAGATGGCCCGAAT
CCATACTCCGAAAGCTCGATCTTGATTTTCTTGATGCTCCATTTCCTGCG
CTTGGAAAATCAGATGTCGAAGCCTTCTTCGATCCCCCTTACTACGAATG
GTACCAAAGGAATGAGGATTGTACTCAGTATATAAACTTTGAACAGAGCA
TTGCATATATTGAAGATTACATGGTAACGCATGGTCCTTTTGATGGTTTG
CTGGGCTTCTCTCAGGGAGCATTTATAGCAGCTGCTTCACCAGGGATGCA
AGCAGAGGGAGTGGCTTTTACTAAAGTACCAAAGATAAAGTTTGTGATAT
TAATAGCAGGGGCTAAATTCCTGGGATTCAAGTTTGGGCAGCCTAAGCTT
GCGGTTAATGCATTTTCATCCCCAGTCCAGTGCCCATCTCTTCATATTAT
AGGAGAAAATGATTTCTTGAAGGAGCAAGGAATGGTTCTCCTGGAATCGT
TTGTAGACCCTGTTGTGATTTATCACTCCAAGGGGCACACTATCCCGAGA
ATTGATGAGAGAGGCCAAGAGACAATGCTCAGTTTCATCCAGAAATTTCA
AATGATATGATGCAATCATGCACAATGATGATGCCTTTGGTGATTTATTA
CCG
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