CN184734

Overview
NameCN184734
Unique NameCN184734
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length672
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10954 contig Csv1_Contig10954:149..820. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN184734 vs. ExPASy Swiss-Prot
Match: CYPH_CATRO (Peptidyl-prolyl cis-trans isomerase OS=Catharanthus roseus GN=PCKR1 PE=2 SV=1)

HSP 1 Score: 280.026 bits (715), Expect = 7.600e-75
Identity = 132/144 (91.67%), Postives = 137/144 (95.14%), Query Frame = -3
Query:  239 TPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFTARNGTGGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 670
            TPRTAENFRALCTGEKG G+SGKPLHYK SSFHRVIPGFMCQGGDFTA NGTGGESIYG+KFADENF+KKHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRT K VV+ DCGQLS
Sbjct:   29 TPRTAENFRALCTGEKGTGRSGKPLHYKDSSFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTAKKVVVEDCGQLS 172          
BLAST of CN184734 vs. ExPASy Swiss-Prot
Match: CYPH_SOLLC (Peptidyl-prolyl cis-trans isomerase OS=Solanum lycopersicum GN=CYP PE=2 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 1.433e-73
Identity = 128/143 (89.51%), Postives = 136/143 (95.10%), Query Frame = -3
Query:  242 TPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFTARNGTGGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 670
            TP+TAENFRALCTGEKG+GK GKPLHYKGS+FHRVIPGFMCQGGDFTA NGTGGESIYG+KF DENFVKKHTGPGILSMANAGPGTNGSQFF+CTAKTEWL+GKHVVFGQVVEGMDV+K  E VGSSSGR +KPVVIADCGQL
Sbjct:   29 TPKTAENFRALCTGEKGVGKMGKPLHYKGSTFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFNDENFVKKHTGPGILSMANAGPGTNGSQFFICTAKTEWLNGKHVVFGQVVEGMDVIKKAEAVGSSSGRCSKPVVIADCGQL 171          
BLAST of CN184734 vs. ExPASy Swiss-Prot
Match: CYPH_LUPLU (Peptidyl-prolyl cis-trans isomerase OS=Lupinus luteus PE=2 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 2.288e-71
Identity = 122/144 (84.72%), Postives = 136/144 (94.44%), Query Frame = -3
Query:  239 TPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFTARNGTGGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 670
            TPRTAENFRALCTGEKG+G+SGKPLHYKGS+FHRVIP FMCQGGDFTA NGTG ESIYG+KFADENF+K+HTGPGILSMANAG GTNGSQFF+CT KTEWLDGKHVVFG+V+EGM+VV+ IEKVGS SG+T++PV IADCGQLS
Sbjct:   29 TPRTAENFRALCTGEKGVGRSGKPLHYKGSTFHRVIPNFMCQGGDFTAGNGTGAESIYGAKFADENFIKRHTGPGILSMANAGAGTNGSQFFICTEKTEWLDGKHVVFGKVIEGMNVVRDIEKVGSGSGKTSRPVTIADCGQLS 172          
BLAST of CN184734 vs. ExPASy Swiss-Prot
Match: CP19A_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-1 OS=Arabidopsis thaliana GN=CYP19-1 PE=1 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 2.989e-71
Identity = 125/144 (86.81%), Postives = 133/144 (92.36%), Query Frame = -3
Query:  239 TPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFTARNGTGGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 670
            TP TAENFRALCTGE+GIGK GKPLHYKGSSFHRVIP FMCQGGDFTA NGTGGESIYGSKF DENF+KKHTGPGILSMANAG  TNGSQFF+CT KT WLDGKHVVFGQVVEG++VV+ IEKVGS SGRT+KPVVIADCGQ+S
Sbjct:   30 TPETAENFRALCTGERGIGKQGKPLHYKGSSFHRVIPKFMCQGGDFTAGNGTGGESIYGSKFKDENFIKKHTGPGILSMANAGANTNGSQFFICTEKTSWLDGKHVVFGQVVEGLNVVRDIEKVGSDSGRTSKPVVIADCGQIS 173          
BLAST of CN184734 vs. ExPASy Swiss-Prot
Match: CP18C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP18-3 OS=Arabidopsis thaliana GN=CYP18-3 PE=1 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 3.903e-71
Identity = 124/144 (86.11%), Postives = 133/144 (92.36%), Query Frame = -3
Query:  239 TPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFTARNGTGGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 670
            TPRTAENFRALCTGEKG+G +GKPLH+KGS FHRVIP FMCQGGDFTA NGTGGESIYGSKF DENF +KHTGPGILSMANAG  TNGSQFF+CT KT+WLDGKHVVFGQVVEG+DVVKAIEKVGSSSG+  KPVV+ADCGQLS
Sbjct:   29 TPRTAENFRALCTGEKGVGGTGKPLHFKGSKFHRVIPNFMCQGGDFTAGNGTGGESIYGSKFEDENFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKVGSSSGKPTKPVVVADCGQLS 172          
BLAST of CN184734 vs. ExPASy Swiss-Prot
Match: CP19B_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-2 OS=Arabidopsis thaliana GN=CYP19-2 PE=1 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 1.483e-70
Identity = 121/144 (84.03%), Postives = 134/144 (93.06%), Query Frame = -3
Query:  239 TPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFTARNGTGGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 670
            TP+TAENFRALCTGEKG+G+SGKPLH+KGSSFHRVIP FMCQGGDFT  NGTGGESIYG+KF DENF +KHTGPGILSMANAG  TNGSQFF+CT KT+WLDGKHVVFGQVVEG+DVVKAIEK+GSSSG+  KPVVIADCG++S
Sbjct:   30 TPKTAENFRALCTGEKGVGRSGKPLHFKGSSFHRVIPNFMCQGGDFTKGNGTGGESIYGAKFEDENFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKIGSSSGKPTKPVVIADCGEIS 173          
BLAST of CN184734 vs. ExPASy Swiss-Prot
Match: CYPH_ALLCE (Peptidyl-prolyl cis-trans isomerase OS=Allium cepa GN=CYP PE=2 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 1.937e-70
Identity = 125/143 (87.41%), Postives = 133/143 (93.01%), Query Frame = -3
Query:  239 PRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFTARNGTGGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 667
            P+TAENFRALCTGEKG+G   KPLHYKGSSFHRVIPGFMCQGGDFTA NGTGGESIYG+KF DENF+KKHTGPG+LSMANAGPGTNGSQFF+CT KT WLDGKHVVFGQVVEGMDVV+AIEKVGS SG+T KPV IADCGQLS
Sbjct:    9 PQTAENFRALCTGEKGMGDR-KPLHYKGSSFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFKDENFIKKHTGPGVLSMANAGPGTNGSQFFICTEKTAWLDGKHVVFGQVVEGMDVVRAIEKVGSQSGQTKKPVKIADCGQLS 150          
BLAST of CN184734 vs. ExPASy Swiss-Prot
Match: CP18D_ARATH (Peptidyl-prolyl cis-trans isomerase CYP18-4 OS=Arabidopsis thaliana GN=CYP18-4 PE=1 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 1.640e-69
Identity = 121/144 (84.03%), Postives = 132/144 (91.67%), Query Frame = -3
Query:  239 TPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFTARNGTGGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 670
            TP TAENFRALCTGEKG+GK GKPLH+KGS FHRVIPGFMCQGGDFTA+NGTGGESIYG+KF DENF+KKHTG GILSMAN+GP TNGSQFF+CT KT WLDGKHVVFGQVV+G+DVVKAIEKVGS SG+T+K V I DCGQLS
Sbjct:   29 TPNTAENFRALCTGEKGMGKLGKPLHFKGSIFHRVIPGFMCQGGDFTAKNGTGGESIYGAKFKDENFIKKHTGAGILSMANSGPNTNGSQFFICTDKTSWLDGKHVVFGQVVKGLDVVKAIEKVGSDSGKTSKVVTITDCGQLS 172          
BLAST of CN184734 vs. ExPASy Swiss-Prot
Match: CYPH_BRANA (Peptidyl-prolyl cis-trans isomerase OS=Brassica napus GN=CYP PE=2 SV=2)

HSP 1 Score: 258.84 bits (660), Expect = 1.813e-68
Identity = 122/142 (85.92%), Postives = 127/142 (89.44%), Query Frame = -3
Query:  242 PRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFTARNGTGGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 667
            P TAENFRALCTGE+GIGKSGKPLHYKGS+FHRVIP FMCQGGDFTA NGTGGESIYG KF DENFVKKHTGPGILSM NAG  TNGSQFF+CT KT WLDGKHVVFGQVVEGMDVV+ IEKVGS SGRT+K VV  DCGQL
Sbjct:   30 PETAENFRALCTGERGIGKSGKPLHYKGSAFHRVIPKFMCQGGDFTAGNGTGGESIYGMKFKDENFVKKHTGPGILSMRNAGSNTNGSQFFICTEKTSWLDGKHVVFGQVVEGMDVVRDIEKVGSDSGRTSKKVVTCDCGQL 171          
BLAST of CN184734 vs. ExPASy Swiss-Prot
Match: CYPH_MAIZE (Peptidyl-prolyl cis-trans isomerase OS=Zea mays GN=CYP PE=2 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 6.449e-66
Identity = 116/143 (81.12%), Postives = 126/143 (88.11%), Query Frame = -3
Query:  239 PRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQGGDFTARNGTGGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 667
            P+TAENFRALCTGEKG+GKSGKPLHYKGS+FHRVIP FMCQGGDFT  NGTGGESIYG KF DE FV+K   PG+LSMANAGP TNGSQFF+CT  T WLDGKHVVFGQVVEGMDVVKAIEKVG+ +G T+K V +ADCGQLS
Sbjct:   30 PKTAENFRALCTGEKGVGKSGKPLHYKGSTFHRVIPEFMCQGGDFTRGNGTGGESIYGEKFPDEKFVRKQPAPGVLSMANAGPNTNGSQFFICTVATPWLDGKHVVFGQVVEGMDVVKAIEKVGTRNGSTSKVVKVADCGQLS 172          
The following BLAST results are available for this feature:
BLAST of CN184734 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 247
Match NameE-valueIdentityDescription
CYPH_CATRO7.600e-7591.67Peptidyl-prolyl cis-trans isomerase OS=Catharanthu... [more]
CYPH_SOLLC1.433e-7389.51Peptidyl-prolyl cis-trans isomerase OS=Solanum lyc... [more]
CYPH_LUPLU2.288e-7184.72Peptidyl-prolyl cis-trans isomerase OS=Lupinus lut... [more]
CP19A_ARATH2.989e-7186.81Peptidyl-prolyl cis-trans isomerase CYP19-1 OS=Ara... [more]
CP18C_ARATH3.903e-7186.11Peptidyl-prolyl cis-trans isomerase CYP18-3 OS=Ara... [more]
CP19B_ARATH1.483e-7084.03Peptidyl-prolyl cis-trans isomerase CYP19-2 OS=Ara... [more]
CYPH_ALLCE1.937e-7087.41Peptidyl-prolyl cis-trans isomerase OS=Allium cepa... [more]
CP18D_ARATH1.640e-6984.03Peptidyl-prolyl cis-trans isomerase CYP18-4 OS=Ara... [more]
CYPH_BRANA1.813e-6885.92Peptidyl-prolyl cis-trans isomerase OS=Brassica na... [more]
CYPH_MAIZE6.449e-6681.12Peptidyl-prolyl cis-trans isomerase OS=Zea mays GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005P24_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005P24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184734 ID=CN184734; Name=CN184734; organism=Citrus sinensis; type=EST; length=672bp
GAGGCAAGACAAGCCCTATCTTATTTAAAAAGGCAGCTCATAGAAAGACA
TAAAAAACAGTTCATCAAGAACCACCACCGGAGACCCGATCCAACCCGAA
CAAGTAACATAGCAGGAAAATTAGATAAAGATTAAAAGTCCTACAGACAC
GGCCACATAATAATAGATAACATAATCACCATCACGATCGCGATCAGACG
GCTCGTGATGATGGCGATCATTATCATGATCAAATCTAAGACAATTGACC
GCAATCAGCGATCACGACGGGCTTGTTGGTCCTTCCGGAGCTGGACCCCA
CTTTCTCGATGGCCTTGACGACGTCCATTCCTTCGACGACTTGACCGAAC
ACAACGTGCTTCCCATCGAGCCACTCGGTCTTGGCCGTACAGACGAAGAA
CTGAGATCCGTTGGTTCCGGGTCCGGCATTCGCCATGGAGAGGATTCCGG
GGCCGGTGTGCTTCTTCACGAAGTTCTCATCGGCGAATTTTGAGCCGTAG
ATTGATTCGCCTCCGGTTCCGTTTCGGGCGGTGAAGTCTCCCCCCTGGCA
CATGAATCCGGGGATCACACGGTGGAAGGACGAGCCCTTGTAGTGGAGTG
GCTTGCCGGACTTGCCGATGCCTTTCTCGCCGGTGCAGAGGGCGCGGAAG
TTCTCGGCGGTTCGGGGGGTGA
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