CN184731

Overview
NameCN184731
Unique NameCN184731
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length408
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN184731 vs. ExPASy Swiss-Prot
Match: ZN593_XENTR (Zinc finger protein 593 OS=Xenopus tropicalis GN=znf593 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.234e-12
Identity = 32/59 (54.24%), Postives = 41/59 (69.49%), Query Frame = -2 
Query:  207 DEDLPGMGQYYCLHCDRYFAHESVRDEHFKTKRHKKRVKEMMGPKPHTQLDADLAAGMG 383
            D  LPG  Q+YCLHC RYF       EHFKTK HK+R+K++   +P+TQ +A+ AAGMG
Sbjct:   52 DYQLPGNAQHYCLHCSRYFVDLKTLKEHFKTKVHKRRLKQLR-EEPYTQEEAERAAGMG 109
The following BLAST results are available for this feature:
BLAST of CN184731 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ZN593_XENTR5.234e-1254.24Zinc finger protein 593 OS=Xenopus tropicalis GN=z... [more]
back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_0005P22_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005P22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184731 ID=CN184731; Name=CN184731; organism=Citrus sinensis; type=EST; length=408bp
TTTTTTTTTTTTTAGGAAAAACAATAATTTATACTCTTTCAGGAAAAAAA
TTAGCAACTGTCAGAAAAGATATAATCCTTACAACACCTAATATCTTCCA
TTCTCTGAAGACCTGACATTAACTCTCATATCATAGCATACATATTGAAT
TAACCCCAAAAACAAAAACCTCACACAGGCATAAGCTTTGGACCATTATC
TGGCATACCCATCCCAGCAGCTAAGTCAGCATCAAGTTGTGTATGAGGTT
TAGGCCCCATCATTTCCTTTACACGCTTCTTGTGTCGCTTTGTCTTGAAA
TGCTCGTCCCTCACCGACTCATGAGCAAAGTAACGGTCGCAGTGTAAGCA
ATAATATTGGCCCATTCCAGGCAAATCCTCGTCAAAAGGCAAGGGATTCT
TTGCGGAA
back to top