CN184728

Overview
NameCN184728
Unique NameCN184728
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length657
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13395 contig Csv1_Contig13395:515..1171. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN184728 vs. ExPASy Swiss-Prot
Match: LGUL_ORYSJ (Lactoylglutathione lyase OS=Oryza sativa subsp. japonica GN=GLX-I PE=1 SV=2)

HSP 1 Score: 219.164 bits (557), Expect = 1.534e-56
Identity = 105/129 (81.40%), Postives = 116/129 (89.92%), Query Frame = -1
Query:  265 LADLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQ 651
            + DL RSIKFYEKALGMKLLR  D P+YKYT+AMLGYA+ED+TTV+ELTYNYGVTEYTKGNAYAQVAI T+DVYKSAE V LVT+ELGGKI RQPG +PGLNTKI SF+DPDGWK VLVDN DFLKE+Q
Sbjct:  163 VGDLDRSIKFYEKALGMKLLRKKDVPDYKYTIAMLGYADEDKTTVIELTYNYGVTEYTKGNAYAQVAIGTEDVYKSAEAVELVTKELGGKILRQPGPLPGLNTKIASFLDPDGWKVVLVDNADFLKELQ 291          

HSP 2 Score: 104.375 bits (259), Expect = 5.508e-22
Identity = 57/121 (47.11%), Postives = 72/121 (59.50%), Query Frame = -1
Query:  295 FALADLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLV 657
            + + DL R+IK Y +  GMKLLR  D PE KYT A LG+  ED    LELTYNYGV +Y  G  +   AI+T+DVYK AE +         KITR+PG + G +T I    DPDG+   L+
Sbjct:   30 YRVGDLDRTIKCYTECFGMKLLRKRDVPEEKYTNAFLGFGPEDTNFALELTYNYGVDKYDIGAGFGHFAIATEDVYKLAEKIK---SSCCCKITREPGPVKGGSTVIAFAQDPDGYMFELI 147          
BLAST of CN184728 vs. ExPASy Swiss-Prot
Match: LGUL_BRAOG (Putative lactoylglutathione lyase OS=Brassica oleracea var. gemmifera PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 3.660e-50
Identity = 94/129 (72.87%), Postives = 112/129 (86.82%), Query Frame = -1
Query:  265 LADLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQ 651
            + DL R++KF EKALGM+LLR +++PEY  T+ M+GYAEE ++ VLELTYNYGVTEYTKGNAYAQ+AI TDDVYKSAEVV +V QELGGKITR+ G +PGL TKI SF+DPDGWK VLVDNEDFLKE++
Sbjct:  155 VGDLDRAVKFMEKALGMRLLRRIERPEYN-TIGMMGYAEEYESIVLELTYNYGVTEYTKGNAYAQIAIGTDDVYKSAEVVKIVNQELGGKITREAGPLPGLGTKIVSFLDPDGWKQVLVDNEDFLKELE 282          

HSP 2 Score: 101.679 bits (252), Expect = 3.570e-21
Identity = 53/121 (43.80%), Postives = 71/121 (58.68%), Query Frame = -1
Query:  295 FALADLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLV 657
            + + DL R+I+FY +  GMK+LR  D PE KY+ A LG+  E    V+ELTYNYGV+ Y  G  +   AIST DV K  E V    +  GG +TR+PG + G  + I    DPDG+   L+
Sbjct:   23 YRVGDLDRTIQFYTECFGMKVLRKRDVPEEKYSNAFLGFGPETSNFVVELTYNYGVSSYDIGTGFGHFAISTQDVSKMVEAV----RAKGGNVTREPGPVKGGGSVIAFVKDPDGYTFELI 139          
BLAST of CN184728 vs. ExPASy Swiss-Prot
Match: LGUL_VIBCH (Probable lactoylglutathione lyase OS=Vibrio cholerae GN=gloA PE=3 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 3.334e-27
Identity = 57/122 (46.72%), Postives = 79/122 (64.75%), Query Frame = -1
Query:  286 LADLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE 651
            + DL +SI+FY + +GM LLR  +  EYKYTLA LGY +E Q  V+ELTYN+GV +Y KGNAY  +AI  DD+Y + + +    +  GG +TR+PG + G  T I    DPDG+   L+ N+
Sbjct:   13 VGDLDKSIEFYTQVMGMSLLRKNENTEYKYTLAFLGYGDESQGAVIELTYNWGVADYEKGNAYGHIAIGVDDIYATCDTI----KAAGGIVTREPGPVKGGTTHIAFVKDPDGYMIELIQNK 130          
BLAST of CN184728 vs. ExPASy Swiss-Prot
Match: LGUL_HAEIN (Lactoylglutathione lyase OS=Haemophilus influenzae GN=gloA PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.334e-27
Identity = 58/122 (47.54%), Postives = 79/122 (64.75%), Query Frame = -1
Query:  286 LADLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE 651
            + DL RSIKFY+  LGM+LLRT + PEYKYTLA LGY + +    +ELTYN+GV +Y  G AY  +AI  DD+Y + E V    +  GG +TR+ G + G +T I    DPDG+K   ++N+
Sbjct:   10 VGDLDRSIKFYQDVLGMRLLRTSENPEYKYTLAFLGYEDGESAAEIELTYNWGVDKYEHGTAYGHIAIGVDDIYATCEAV----RASGGNVTREAGPVKGGSTVIAFVEDPDGYKIEFIENK 127          
BLAST of CN184728 vs. ExPASy Swiss-Prot
Match: LGUL_SHIFL (Lactoylglutathione lyase OS=Shigella flexneri GN=gloA PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.287e-26
Identity = 57/123 (46.34%), Postives = 80/123 (65.04%), Query Frame = -1
Query:  283 LADLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED 651
            + DL RSI FY K LGMKLLRT + PEYKY+LA +GY  E +  V+ELTYN+GV +Y  G AY  +A+S D+  ++ E +    ++ GG +TR+ G + G  T I    DPDG+K  L++ +D
Sbjct:   10 VGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKD 128          
BLAST of CN184728 vs. ExPASy Swiss-Prot
Match: LGUL_ECOLI (Lactoylglutathione lyase OS=Escherichia coli (strain K12) GN=gloA PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.287e-26
Identity = 57/123 (46.34%), Postives = 80/123 (65.04%), Query Frame = -1
Query:  283 LADLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED 651
            + DL RSI FY K LGMKLLRT + PEYKY+LA +GY  E +  V+ELTYN+GV +Y  G AY  +A+S D+  ++ E +    ++ GG +TR+ G + G  T I    DPDG+K  L++ +D
Sbjct:   10 VGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKD 128          
BLAST of CN184728 vs. ExPASy Swiss-Prot
Match: LGUL_ECO57 (Lactoylglutathione lyase OS=Escherichia coli O157:H7 GN=gloA PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.287e-26
Identity = 57/123 (46.34%), Postives = 80/123 (65.04%), Query Frame = -1
Query:  283 LADLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED 651
            + DL RSI FY K LGMKLLRT + PEYKY+LA +GY  E +  V+ELTYN+GV +Y  G AY  +A+S D+  ++ E +    ++ GG +TR+ G + G  T I    DPDG+K  L++ +D
Sbjct:   10 VGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKD 128          
BLAST of CN184728 vs. ExPASy Swiss-Prot
Match: LGUL_SALTY (Lactoylglutathione lyase OS=Salmonella typhimurium GN=gloA PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.072e-25
Identity = 57/123 (46.34%), Postives = 80/123 (65.04%), Query Frame = -1
Query:  283 LADLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED 651
            + DL RSI FY   LGMKLLRT + PEYKY+LA +GY  E +  V+ELTYN+GV  Y  GNAY  +A+S D+  ++ E +    ++ GG +TR+ G + G +T I    DPDG+K  L++ +D
Sbjct:   10 VGDLQRSIAFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVESYDMGNAYGHIALSVDNAAEACERI----RQNGGNVTREAGPVKGGSTIIAFVEDPDGYKIELIEAKD 128          
BLAST of CN184728 vs. ExPASy Swiss-Prot
Match: LGUL_SALTI (Lactoylglutathione lyase OS=Salmonella typhi GN=gloA PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.072e-25
Identity = 57/123 (46.34%), Postives = 80/123 (65.04%), Query Frame = -1
Query:  283 LADLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED 651
            + DL RSI FY   LGMKLLRT + PEYKY+LA +GY  E +  V+ELTYN+GV  Y  GNAY  +A+S D+  ++ E +    ++ GG +TR+ G + G +T I    DPDG+K  L++ +D
Sbjct:   10 VGDLQRSIAFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVESYDMGNAYGHIALSVDNAAEACERI----RQNGGNVTREAGPVKGGSTIIAFVEDPDGYKIELIEAKD 128          
BLAST of CN184728 vs. ExPASy Swiss-Prot
Match: LGUL_VIBPA (Probable lactoylglutathione lyase OS=Vibrio parahaemolyticus GN=gloA PE=3 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 2.389e-25
Identity = 54/122 (44.26%), Postives = 78/122 (63.93%), Query Frame = -1
Query:  286 LADLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE 651
            + DL +SIKFY + +GM+LLRT +  EY+YTLA +GY +E Q  V+ELTYN+G TEY  G A+  +AI  DD+Y + + +    +  GG +TR+ G + G  T I    DPDG+   L+ N+
Sbjct:   13 VGDLDKSIKFYTEVMGMQLLRTNENKEYEYTLAFVGYGDESQGAVIELTYNWGKTEYDLGTAFGHIAIGVDDIYATCDAI----KAAGGNVTREAGPVKGGTTHIAFVKDPDGYMIELIQNK 130          
The following BLAST results are available for this feature:
BLAST of CN184728 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
LGUL_ORYSJ1.534e-5681.40Lactoylglutathione lyase OS=Oryza sativa subsp. ja... [more]
LGUL_BRAOG3.660e-5072.87Putative lactoylglutathione lyase OS=Brassica oler... [more]
LGUL_VIBCH3.334e-2746.72Probable lactoylglutathione lyase OS=Vibrio choler... [more]
LGUL_HAEIN3.334e-2747.54Lactoylglutathione lyase OS=Haemophilus influenzae... [more]
LGUL_SHIFL6.287e-2646.34Lactoylglutathione lyase OS=Shigella flexneri GN=g... [more]
LGUL_ECOLI6.287e-2646.34Lactoylglutathione lyase OS=Escherichia coli (stra... [more]
LGUL_ECO576.287e-2646.34Lactoylglutathione lyase OS=Escherichia coli O157:... [more]
LGUL_SALTY1.072e-2546.34Lactoylglutathione lyase OS=Salmonella typhimurium... [more]
LGUL_SALTI1.072e-2546.34Lactoylglutathione lyase OS=Salmonella typhi GN=gl... [more]
LGUL_VIBPA2.389e-2544.26Probable lactoylglutathione lyase OS=Vibrio paraha... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005P20_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005P20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184728 ID=CN184728; Name=CN184728; organism=Citrus sinensis; type=EST; length=657bp
GCAGGTTAGAAAAACTCACACTTATTTAAATTTTAGACAAAAAAACAAAT
GCTGCCATAGCAACGTAATCCAAATTTAAGCAGTAGATCTCAATTTAATA
ATTCATCACATCACATAGCAGCAAACCACCGATATCGTAACAGGCATATC
GGTGGCTTTCAATACCAGACACGGTAATTTATTCATACAGATAGTACAGT
AGTAGGATTTATTTTGATGCAAGTGTTTTGCAAAACTCCTCCTACCATGA
CATCATTATTCCGACTGAATTTCCTTCAGAAAATCTTCATTGTCAACCAG
GACCGTTTTCCAGCCATCTGGGTCTACGAAAGAGGTGATTTTGGTGTTGA
GTCCAGGGATTGATCCGGGTTGCCGAGTTATCTTCCCTCCAAGCTCTTGG
GTAACCAGGTTGACAACCTCAGCACTTTTGTATACATCATCAGTACTAAT
AGCAACCTGCGCATATGCATTTCCCTTGGTATATTCAGTCACACCATAAT
TATAAGTTAACTCCAGAACAGTAGTCTGATCTTCCTCAGCATATCCAAGC
ATGGCCAGNGTGTACTTGTATTCAGGTTTATCAACTGTTCTTAACAGTTT
CATCCCCAAAGCCTTTTCATAGAACTTGATGGAGCGACCAAGATCGGCCA
ACGCGAA
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