CN184724
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN184724 vs. ExPASy Swiss-Prot
Match: RL8_SOLLC (60S ribosomal protein L8 OS=Solanum lycopersicum GN=RPL8 PE=2 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 3.152e-57 Identity = 103/108 (95.37%), Postives = 108/108 (100.00%), Query Frame = 1 Query: 25 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIP 348 MGRVIRAQRKGAGSVFKSHTHHRKGPARFR+LDFGERNGYLKGVITE+IHDPGRGAPLARVTFRHPFRY+HQKELFVAAEGMYTGQFVYCG+KATL+VGNVLPLRSIP Sbjct: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRTLDFGERNGYLKGVITEVIHDPGRGAPLARVTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKATLMVGNVLPLRSIP 108
BLAST of CN184724 vs. ExPASy Swiss-Prot
Match: RL8_TOBAC (60S ribosomal protein L8 OS=Nicotiana tabacum GN=RPL8 PE=2 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 2.043e-56 Identity = 102/108 (94.44%), Postives = 107/108 (99.07%), Query Frame = 1 Query: 25 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIP 348 MGR+IRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITE+IHDPGRGAPLARVTFR+PFRY HQKELFVAAEGMYTGQFVYCG+KATL+VGNVLPLRSIP Sbjct: 1 MGRLIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEVIHDPGRGAPLARVTFRYPFRYNHQKELFVAAEGMYTGQFVYCGKKATLMVGNVLPLRSIP 108
BLAST of CN184724 vs. ExPASy Swiss-Prot
Match: RL81_ARATH (60S ribosomal protein L8-1 OS=Arabidopsis thaliana GN=RPL8A PE=2 SV=2) HSP 1 Score: 214.927 bits (546), Expect = 1.014e-55 Identity = 101/108 (93.52%), Postives = 107/108 (99.07%), Query Frame = 1 Query: 25 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIP 348 MGRVIRAQRKGAGSVFKSHTHHRKGPA+FRSLDFGERNGYLKGV+TEIIHDPGRGAPLARVTFRHPFR++ QKELFVAAEGMYTGQF+YCG+KATLVVGNVLPLRSIP Sbjct: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVTFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIP 108
BLAST of CN184724 vs. ExPASy Swiss-Prot
Match: RL83_ARATH (60S ribosomal protein L8-3 OS=Arabidopsis thaliana GN=RPL8C PE=2 SV=2) HSP 1 Score: 213.001 bits (541), Expect = 3.853e-55 Identity = 100/108 (92.59%), Postives = 106/108 (98.15%), Query Frame = 1 Query: 25 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIP 348 MGRVIRAQRKGAGSVFKSHTHHRKGPA+FRSLDFGERNGYLKGV+TEIIHDPGRGAPLARV FRHPFR++ QKELFVAAEGMYTGQF+YCG+KATLVVGNVLPLRSIP Sbjct: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVAFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIP 108
BLAST of CN184724 vs. ExPASy Swiss-Prot
Match: RL82_ARATH (60S ribosomal protein L8-2 OS=Arabidopsis thaliana GN=RPL8B PE=2 SV=2) HSP 1 Score: 200.29 bits (508), Expect = 2.584e-51 Identity = 95/109 (87.16%), Postives = 103/109 (94.50%), Query Frame = 1 Query: 25 MGRVIRAQRKGA-GSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIP 348 MGRVIRAQRKGA GSVFKSHTHHRKGPA+FRSLD+GERNGYLKG++TEIIHDPGRGAPLARV FRHPFRY QKELFVAAEGMYTGQ++YCG+KA L+VGNVLPL SIP Sbjct: 1 MGRVIRAQRKGAAGSVFKSHTHHRKGPAKFRSLDYGERNGYLKGLVTEIIHDPGRGAPLARVAFRHPFRYMKQKELFVAAEGMYTGQYLYCGKKANLMVGNVLPLGSIP 109
BLAST of CN184724 vs. ExPASy Swiss-Prot
Match: RL8_DROME (60S ribosomal protein L8 OS=Drosophila melanogaster GN=RpL8 PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 1.088e-41 Identity = 78/108 (72.22%), Postives = 93/108 (86.11%), Query Frame = 1 Query: 25 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIP 348 MGRVIRAQRKGAGSVFK+H RKG A+ RSLDF ER+GY++GV+ +IIHDPGRGAPLA V FR P+RY+ +KELF+A EGM+TGQFVYCGRKATL +GNV+PL +P Sbjct: 1 MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAVVHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMP 108
BLAST of CN184724 vs. ExPASy Swiss-Prot
Match: RL8_XENLA (60S ribosomal protein L8 OS=Xenopus laevis GN=rpl8 PE=2 SV=3) HSP 1 Score: 167.162 bits (422), Expect = 2.424e-41 Identity = 74/108 (68.52%), Postives = 94/108 (87.04%), Query Frame = 1 Query: 25 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIP 348 MGRVIR QRKGAGSVFK+H HRKG A+ R++DF ERNGY+KG++ +IIHDPGRGAPLA+V FR P+R++ + ELFVAAEG++TGQFVYCG+KA L +GNVLP+ ++P Sbjct: 1 MGRVIRGQRKGAGSVFKAHVKHRKGAAKLRAIDFAERNGYIKGIVKDIIHDPGRGAPLAKVAFRDPYRFKKRTELFVAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMP 108
BLAST of CN184724 vs. ExPASy Swiss-Prot
Match: RL8_XENTR (60S ribosomal protein L8 OS=Xenopus tropicalis GN=rpl8 PE=2 SV=3) HSP 1 Score: 164.851 bits (416), Expect = 1.203e-40 Identity = 73/108 (67.59%), Postives = 94/108 (87.04%), Query Frame = 1 Query: 25 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIP 348 MGRVIR QRKGAGSVFK+H HRKG A+ R++DF ER+GY+KG++ +IIHDPGRGAPLA+V FR P+R++ + ELFVAAEG++TGQFVYCG+KA L +GNVLP+ ++P Sbjct: 1 MGRVIRGQRKGAGSVFKAHVKHRKGAAKLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVAFRDPYRFKKRTELFVAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMP 108
BLAST of CN184724 vs. ExPASy Swiss-Prot
Match: RL8_RAT (60S ribosomal protein L8 OS=Rattus norvegicus GN=Rpl8 PE=2 SV=2) HSP 1 Score: 164.466 bits (415), Expect = 1.571e-40 Identity = 72/108 (66.67%), Postives = 94/108 (87.04%), Query Frame = 1 Query: 25 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIP 348 MGRVIR QRKGAGSVF++H HRKG AR R++DF ER+GY+KG++ +IIHDPGRGAPLA+V FR P+R++ + ELF+AAEG++TGQFVYCG+KA L +GNVLP+ ++P Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMP 108
BLAST of CN184724 vs. ExPASy Swiss-Prot
Match: RL8_PONAB (60S ribosomal protein L8 OS=Pongo abelii GN=RPL8 PE=2 SV=3) HSP 1 Score: 164.466 bits (415), Expect = 1.571e-40 Identity = 72/108 (66.67%), Postives = 94/108 (87.04%), Query Frame = 1 Query: 25 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIP 348 MGRVIR QRKGAGSVF++H HRKG AR R++DF ER+GY+KG++ +IIHDPGRGAPLA+V FR P+R++ + ELF+AAEG++TGQFVYCG+KA L +GNVLP+ ++P Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMP 108 The following BLAST results are available for this feature:
BLAST of CN184724 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184724 ID=CN184724; Name=CN184724; organism=Citrus sinensis; type=EST; length=348bpback to top |