CN184721
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN184721 vs. ExPASy Swiss-Prot
Match: REFP2_MOUSE (RNA and export factor-binding protein 2 OS=Mus musculus GN=Refbp2 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.847e-14 Identity = 46/120 (38.33%), Postives = 60/120 (50.00%), Query Frame = 3 Query: 96 MSSALDMSLDDIIKNNKKXXXXXXXXXXXXXXXXXXXXXXNRGANRVAPYTTAKAPETTWQHDMFADQVSAFPVQQAGRASAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYSIHY 455 M+ +DMSLDDIIK N+ G NR APY+ K WQHD+F G +ETG KL +SNLD+GVS+ DI+ELF+E G LK+ ++ Y Sbjct: 1 MADKMDMSLDDIIKLNRNQRRVNRGGGPRRNRPAIARG----GRNRPAPYSRPKPLPDKWQHDLFDSG--------CGGGEGVETGAKLLVSNLDFGVSDADIQELFAEFGTLKKAAVDY 108
BLAST of CN184721 vs. ExPASy Swiss-Prot
Match: THOC4_TAEGU (THO complex subunit 4 OS=Taeniopygia guttata GN=THOC4 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 3.483e-13 Identity = 38/78 (48.72%), Postives = 50/78 (64.10%), Query Frame = 3 Query: 222 GANRVAPYTTAKAPETTWQHDMFADQVSAFPVQQAGRASAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYSIHY 455 G NR APY+ K WQHD+F S F G + +ETG KL +SNLD+GVS+ DI+ELF+E G LK+ ++HY Sbjct: 67 GRNRPAPYSRPKQLPEKWQHDLFD---SGF-----GAGAGVETGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHY 136
BLAST of CN184721 vs. ExPASy Swiss-Prot
Match: THOC4_MOUSE (THO complex subunit 4 OS=Mus musculus GN=Thoc4 PE=1 SV=3) HSP 1 Score: 73.559 bits (179), Expect = 4.549e-13 Identity = 38/78 (48.72%), Postives = 50/78 (64.10%), Query Frame = 3 Query: 222 GANRVAPYTTAKAPETTWQHDMFADQVSAFPVQQAGRASAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYSIHY 455 G NR APY+ K WQHD+F S F G + +ETG KL +SNLD+GVS+ DI+ELF+E G LK+ ++HY Sbjct: 69 GRNRPAPYSRPKQLPDKWQHDLFD---SGF-----GGGAGVETGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHY 138
BLAST of CN184721 vs. ExPASy Swiss-Prot
Match: THOC4_HUMAN (THO complex subunit 4 OS=Homo sapiens GN=THOC4 PE=1 SV=3) HSP 1 Score: 73.559 bits (179), Expect = 4.549e-13 Identity = 38/78 (48.72%), Postives = 50/78 (64.10%), Query Frame = 3 Query: 222 GANRVAPYTTAKAPETTWQHDMFADQVSAFPVQQAGRASAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYSIHY 455 G NR APY+ K WQHD+F S F G + +ETG KL +SNLD+GVS+ DI+ELF+E G LK+ ++HY Sbjct: 70 GRNRPAPYSRPKQLPDKWQHDLFD---SGF-----GGGAGVETGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHY 139
BLAST of CN184721 vs. ExPASy Swiss-Prot
Match: THOC4_BOVIN (THO complex subunit 4 OS=Bos taurus GN=THOC4 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 4.549e-13 Identity = 38/78 (48.72%), Postives = 50/78 (64.10%), Query Frame = 3 Query: 222 GANRVAPYTTAKAPETTWQHDMFADQVSAFPVQQAGRASAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYSIHY 455 G NR APY+ K WQHD+F S F G + +ETG KL +SNLD+GVS+ DI+ELF+E G LK+ ++HY Sbjct: 70 GRNRPAPYSRPKQLPDKWQHDLFD---SGF-----GGGAGVETGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHY 139
BLAST of CN184721 vs. ExPASy Swiss-Prot
Match: THOC4_XENTR (THO complex subunit 4 OS=Xenopus tropicalis GN=thoc4 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 5.941e-13 Identity = 38/78 (48.72%), Postives = 50/78 (64.10%), Query Frame = 3 Query: 222 GANRVAPYTTAKAPETTWQHDMFADQVSAFPVQQAGRASAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYSIHY 455 G NR APY+ K WQHD+F S F G + +ETG KL +SNLD+GVS+ DI+ELF+E G LK+ ++HY Sbjct: 73 GRNRPAPYSRPKQLPDKWQHDLFD---SGF-----GTGAGMETGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHY 142
BLAST of CN184721 vs. ExPASy Swiss-Prot
Match: THO4B_XENLA (THO complex subunit 4-B OS=Xenopus laevis GN=thoc4-B PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.324e-12 Identity = 37/78 (47.44%), Postives = 49/78 (62.82%), Query Frame = 3 Query: 222 GANRVAPYTTAKAPETTWQHDMFADQVSAFPVQQAGRASAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYSIHY 455 G NR PY+ K WQHD+F S F G + +ETG KL +SNLD+GVS+ DI+ELF+E G LK+ ++HY Sbjct: 69 GRNRPTPYSRPKQLPDKWQHDLFD---SGF-----GTGAGMETGGKLLVSNLDFGVSDADIQELFAEFGSLKKAAVHY 138
BLAST of CN184721 vs. ExPASy Swiss-Prot
Match: THO4A_XENLA (THO complex subunit 4-A OS=Xenopus laevis GN=thoc4-A PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.729e-12 Identity = 37/78 (47.44%), Postives = 49/78 (62.82%), Query Frame = 3 Query: 222 GANRVAPYTTAKAPETTWQHDMFADQVSAFPVQQAGRASAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYSIHY 455 G NR PY+ K WQHD+F S F G + +ETG KL +SNLD+GVS+ DI+ELF+E G LK+ ++HY Sbjct: 70 GRNRPTPYSRPKQLPDKWQHDLFD---SGF-----GAGAGMETGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHY 139 The following BLAST results are available for this feature:
BLAST of CN184721 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN184721 ID=CN184721; Name=CN184721; organism=Citrus sinensis; type=EST; length=457bpback to top |