CN184702
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN184702 vs. ExPASy Swiss-Prot
Match: EXPA2_ORYSJ (Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXPA2 PE=2 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 4.165e-35 Identity = 66/79 (83.54%), Postives = 70/79 (88.61%), Query Frame = -1 Query: 278 FTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 514 FT+NGHSYFNLVL+TNV G GDV SVSIKGS TGWQ MSRNWGQNWQSNSYL+GQSLSFQ+ SDGRTVTSNNVVP W Sbjct: 162 FTINGHSYFNLVLVTNVAGPGDVQSVSIKGSSTGWQPMSRNWGQNWQSNSYLDGQSLSFQVAVSDGRTVTSNNVVPAGW 240 HSP 2 Score: 22.3274 bits (46), Expect = 4.165e-35 Identity = 8/9 (88.89%), Postives = 8/9 (88.89%), Query Frame = -3 Query: 513 CAKKGGIRF 539 C KKGGIRF Sbjct: 154 CVKKGGIRF 162
BLAST of CN184702 vs. ExPASy Swiss-Prot
Match: EXPA1_ARATH (Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.104e-34 Identity = 64/79 (81.01%), Postives = 71/79 (89.87%), Query Frame = -1 Query: 278 FTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 514 FT+NGHSYFNLVLITNVGGAGDVHS +KGS+TGWQAMSRNWGQNWQSNSYLNGQSLSF++T SDG+T+ SNNV W Sbjct: 160 FTINGHSYFNLVLITNVGGAGDVHSAMVKGSRTGWQAMSRNWGQNWQSNSYLNGQSLSFKVTTSDGQTIVSNNVANAGW 238
BLAST of CN184702 vs. ExPASy Swiss-Prot
Match: EXPA8_ARATH (Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 2.034e-34 Identity = 66/80 (82.50%), Postives = 73/80 (91.25%), Query Frame = -1 Query: 278 FTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKT-GWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 514 FT+NGHSYFNLVLI+NVGGAGDVH+VSIKGSKT WQAMSRNWGQNWQSNSY+N QSLSFQ+T SDGRT+ SN+V P NW Sbjct: 163 FTINGHSYFNLVLISNVGGAGDVHAVSIKGSKTQSWQAMSRNWGQNWQSNSYMNDQSLSFQVTTSDGRTLVSNDVAPSNW 242 HSP 2 Score: 21.9422 bits (45), Expect = 2.034e-34 Identity = 8/9 (88.89%), Postives = 8/9 (88.89%), Query Frame = -3 Query: 513 CAKKGGIRF 539 C KKGGIRF Sbjct: 155 CMKKGGIRF 163
BLAST of CN184702 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSJ (Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXPA4 PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 2.035e-34 Identity = 66/79 (83.54%), Postives = 72/79 (91.14%), Query Frame = -1 Query: 278 FTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 514 FTVNGHSYFNLVL+TNV GAGDV SVSIKGS+TGWQ MSRNWGQNWQSN++L+GQSLSFQ+TASDGRTVTSNNV W Sbjct: 157 FTVNGHSYFNLVLVTNVAGAGDVRSVSIKGSRTGWQPMSRNWGQNWQSNAFLDGQSLSFQVTASDGRTVTSNNVAHPGW 235 HSP 2 Score: 21.9422 bits (45), Expect = 2.035e-34 Identity = 7/9 (77.78%), Postives = 8/9 (88.89%), Query Frame = -3 Query: 513 CAKKGGIRF 539 C KKGG+RF Sbjct: 149 CVKKGGVRF 157
BLAST of CN184702 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSI (Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4 PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 2.035e-34 Identity = 66/79 (83.54%), Postives = 72/79 (91.14%), Query Frame = -1 Query: 278 FTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 514 FTVNGHSYFNLVL+TNV GAGDV SVSIKGS+TGWQ MSRNWGQNWQSN++L+GQSLSFQ+TASDGRTVTSNNV W Sbjct: 157 FTVNGHSYFNLVLVTNVAGAGDVRSVSIKGSRTGWQPMSRNWGQNWQSNAFLDGQSLSFQVTASDGRTVTSNNVAHPGW 235 HSP 2 Score: 21.9422 bits (45), Expect = 2.035e-34 Identity = 7/9 (77.78%), Postives = 8/9 (88.89%), Query Frame = -3 Query: 513 CAKKGGIRF 539 C KKGG+RF Sbjct: 149 CVKKGGVRF 157
BLAST of CN184702 vs. ExPASy Swiss-Prot
Match: EXP15_ARATH (Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=2 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 3.211e-34 Identity = 62/79 (78.48%), Postives = 73/79 (92.41%), Query Frame = -1 Query: 278 FTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 514 FT+NGHSYFNLVL+TNVGGAGDVHSV++KGS+T WQ MSRNWGQNWQSN+ LNGQ+LSF++TASDGRTV SNN+ P +W Sbjct: 163 FTINGHSYFNLVLVTNVGGAGDVHSVAVKGSRTRWQQMSRNWGQNWQSNNLLNGQALSFKVTASDGRTVVSNNIAPASW 241
BLAST of CN184702 vs. ExPASy Swiss-Prot
Match: EXP10_ARATH (Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 5.478e-34 Identity = 66/86 (76.74%), Postives = 73/86 (84.88%), Query Frame = -1 Query: 278 RRKEE*GFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 535 RR+ FT+NGHSYFNLVLITNVGGAGDVHS +IKGS+T WQAMSRNWGQNWQSNSYLNGQ+LSF++T SDGRTV S N P W Sbjct: 152 RRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAAIKGSRTVWQAMSRNWGQNWQSNSYLNGQALSFKVTTSDGRTVVSFNAAPAGW 237
BLAST of CN184702 vs. ExPASy Swiss-Prot
Match: EXPA5_ARATH (Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 4.637e-33 Identity = 68/90 (75.56%), Postives = 74/90 (82.22%), Query Frame = -1 Query: 278 RVRRKEE*G--FTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 541 RVR K G FT+NGHSYFNLVL+TNVGGAGDVHSVS+KGS+T WQ MSRNWGQNWQSNSYLNGQSLSF +T SD R+V S NV P W Sbjct: 153 RVRCKRSGGIRFTINGHSYFNLVLVTNVGGAGDVHSVSMKGSRTKWQLMSRNWGQNWQSNSYLNGQSLSFVVTTSDRRSVVSFNVAPPTW 242
BLAST of CN184702 vs. ExPASy Swiss-Prot
Match: EXP14_ARATH (Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 8.745e-32 Identity = 64/86 (74.42%), Postives = 72/86 (83.72%), Query Frame = -1 Query: 278 RRKEE*GFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 535 RRK FT+NGHSYFNLVLITNV GAGDV SVSIKG+ T WQ+MSRNWGQNWQSN+ L+GQ+LSF++T SDGRTV SNN P NW Sbjct: 155 RRKGGIRFTINGHSYFNLVLITNVAGAGDVISVSIKGTNTRWQSMSRNWGQNWQSNAKLDGQALSFKVTTSDGRTVISNNATPRNW 240
BLAST of CN184702 vs. ExPASy Swiss-Prot
Match: EXP11_ORYSJ (Expansin-A11 OS=Oryza sativa subsp. japonica GN=EXPA11 PE=2 SV=2) HSP 1 Score: 130.954 bits (328), Expect = 1.243e-30 Identity = 57/79 (72.15%), Postives = 69/79 (87.34%), Query Frame = -1 Query: 278 FTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 514 FT+ GHSYFNLVL+TNVGGAGDV +VS+KGS++GWQAMS NWG NWQ+ + L+GQ LSF++TASDGRTVTS+NV P W Sbjct: 159 FTITGHSYFNLVLVTNVGGAGDVTAVSVKGSRSGWQAMSHNWGANWQNGANLDGQPLSFRVTASDGRTVTSDNVAPSGW 237 HSP 2 Score: 22.3274 bits (46), Expect = 1.243e-30 Identity = 8/9 (88.89%), Postives = 9/9 (100.00%), Query Frame = -3 Query: 513 CAKKGGIRF 539 CAK+GGIRF Sbjct: 151 CAKQGGIRF 159 The following BLAST results are available for this feature:
BLAST of CN184702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184702 ID=CN184702; Name=CN184702; organism=Citrus sinensis; type=EST; length=541bpback to top |