CN184697

Overview
NameCN184697
Unique NameCN184697
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length694
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2438 contig Csv1_Contig2438:1..694. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN184697 vs. ExPASy Swiss-Prot
Match: 21KD_DAUCA (21 kDa protein OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.478e-39
Identity = 84/164 (51.22%), Postives = 113/164 (68.90%), Query Frame = 1
Query:  154 FIETSCKSTRYRTVCVQSLLPYAYKIQRSPLQMALEALSVSLSRTKSADSFVSNLVKHKDLKPREQQPIDDCLKLMGDSIDRLSKSVQELRGISGANDRDFLWHISNVQTWVSAALTDDDTCLDGLA--ALDGEVKDSIRTRVSNVAEVTSNALALVDQLAKTH 639
            FI+TSC  T Y  VC QSL  YA  IQ +P ++A  AL VSL+RT+ A +F+  L K K LK R+   I DCL+ + DS+DR+S+S  E++ +S A   DF + +SNV+TWVSAALTD+ TC+DG A   +DG++K+S+R +V  VA VTSNALALV+  A  H
Sbjct:   28 FIKTSCTLTTYPAVCEQSLSAYAKTIQNNPQELASTALQVSLTRTQQAQTFMKRLNKFKGLKARQYAAIHDCLEEVEDSLDRVSRSCDEMKNLSHAKGNDFTFRMSNVETWVSAALTDETTCMDGFAGKGMDGKIKESVRAQVVAVARVTSNALALVNNFAAKH 191          
BLAST of CN184697 vs. ExPASy Swiss-Prot
Match: PME61_ARATH (Probable pectinesterase/pectinesterase inhibitor 61 OS=Arabidopsis thaliana GN=PME61 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.463e-15
Identity = 44/156 (28.21%), Postives = 85/156 (54.49%), Query Frame = 1
Query:  157 IETSCKSTRYRTVCVQSLLPYAYKIQRSPLQMALEALSVSLSRTKSADSFVSNLVKHKDLKPREQQPIDDCLKLMGDSIDRLSKSVQELRGISGANDRDFLWHISNVQTWVSAALTDDDTCLDGLAALD---GEVKDSIRTRVSNVAEVTSNALAL 615
            I  +C  + Y  +C+ +LL +   +     ++   + + +L +   A  + S+ + +  + PR +   D CL+L+ DS+D L++++  +  +SG          S+V TW+S+A+T+ DTC DG   ++   GEVKD +   V +++E+ SN LA+
Sbjct:   75 ISRTCSKSLYPNLCIDTLLDFPGSLTADENELIHISFNATLQKFSKA-LYTSSTITYTQMPPRVRSAYDSCLELLDDSVDALTRALSSVVVVSGDESH------SDVMTWLSSAMTNHDTCTDGFDEIEGQGGEVKDQVIGAVKDLSEMVSNCLAI 223          
BLAST of CN184697 vs. ExPASy Swiss-Prot
Match: PME3_PHAVU (Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.259e-15
Identity = 52/161 (32.30%), Postives = 81/161 (50.31%), Query Frame = 1
Query:  157 IETSCKSTRYRTVCVQSLLPYAYKIQRSPLQMALEALSVSLSRTKSADSFVSNLVKHKDLKPREQQPIDDCLKLMGDSIDRLSKSVQELRGISGANDRDFLWHISNVQTWVSAALTDDDTCLDGLAALDGEVK----DSIRTRVSNVAEVTSNALALVDQL 627
            ++  C +TRY + C  S+          P  +   +L V++    S   F S L  + +   R Q+ ID C  + GD++DRL+ S+  L  ++G         +SNV+TW+SAALTD DTCLD +  L+          I T + N  E  SN+LA+V ++
Sbjct:   77 LKAVCDTTRYPSSCFSSISSLPESNTTDPELLFKLSLRVAIDELSS---FPSKLRANAEQDARLQKAIDVCSSVFGDALDRLNDSISALGTVAGRIASSA--SVSNVETWLSAALTDQDTCLDAVGELNSTAARGALQEIETAMRNSTEFASNSLAIVTKI 232          
BLAST of CN184697 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.481e-15
Identity = 51/203 (25.12%), Postives = 105/203 (51.72%), Query Frame = 1
Query:   46 MARIANLLLALPVLCIMGMAKAGTITELPSHNGDSIFIETSCKSTRYRTVCVQSLLPYAYKIQRSPLQMALEALSVSLSRTKSADSF--VSNLVKHKDLKPREQQPIDDCLKLMGDSIDRLSKSVQELRGISGANDRDFLWHISNVQTWVSAALTDDDTCLDGLAALDG--EVKDSIRTRVSNVAEVTSNALALVDQLAKTHL 642
            +A  A LL+   V+ I+    +   +    +      +++SC STRY  +C  ++       ++   Q  +  +S++++ T    ++  +  L+K  +L  RE+  + DCL+ + +++D L K+V++L      N +    H  +++T +SAA+T+  TCLDG +  D    V+D++     +V ++ SNALA++  +  T +
Sbjct:   32 LALFATLLVVAAVIGIVAGVNSRKNSGDNGNEPHHAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYP--NKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDM 232          
BLAST of CN184697 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.481e-15
Identity = 51/203 (25.12%), Postives = 105/203 (51.72%), Query Frame = 1
Query:   46 MARIANLLLALPVLCIMGMAKAGTITELPSHNGDSIFIETSCKSTRYRTVCVQSLLPYAYKIQRSPLQMALEALSVSLSRTKSADSF--VSNLVKHKDLKPREQQPIDDCLKLMGDSIDRLSKSVQELRGISGANDRDFLWHISNVQTWVSAALTDDDTCLDGLAALDG--EVKDSIRTRVSNVAEVTSNALALVDQLAKTHL 642
            +A  A LL+   V+ I+    +   +    +      +++SC STRY  +C  ++       ++   Q  +  +S++++ T    ++  +  L+K  +L  RE+  + DCL+ + +++D L K+V++L      N +    H  +++T +SAA+T+  TCLDG +  D    V+D++     +V ++ SNALA++  +  T +
Sbjct:   32 LALFATLLVVAAVIGIVAGVNSRKNSGDNGNEPHHAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYP--NKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDM 232          
BLAST of CN184697 vs. ExPASy Swiss-Prot
Match: PME34_ARATH (Probable pectinesterase/pectinesterase inhibitor 34 OS=Arabidopsis thaliana GN=PME34 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.145e-14
Identity = 48/154 (31.17%), Postives = 80/154 (51.95%), Query Frame = 1
Query:  157 IETSCKSTRYRTVCVQSLLPYAYKIQRSPLQMALEALSVSLSRTKSADSFVSNLVKHKDLKPREQQPIDDCLKLMGDSIDRLSKSVQELRGISGANDRDFLWHISNVQTWVSAALTDDDTCLDGLAAL-DGEVKDSIRTRVSNVAEVTSNALAL 615
            I  +C+ TR+  +CV SL+ +   +  S  +  +           S   + S  +   D+ PR +   D C++L+ DS+D LS+++  +   S A  +D       V TW+SAALT+ DTC +G   + DG VKD +   + N++E+ SN LA+
Sbjct:   87 ISKACELTRFPELCVDSLMDFPGSLAASSSKDLIHVTVNMTLHHFSHALYSSASLSFVDMPPRARSAYDSCVELLDDSVDALSRALSSVVS-SSAKPQD-------VTTWLSAALTNHDTCTEGFDGVDDGGVKDHMTAALQNLSELVSNCLAI 232          
BLAST of CN184697 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 5.202e-13
Identity = 58/206 (28.16%), Postives = 111/206 (53.88%), Query Frame = 1
Query:   43 IMARIANLLLALPVLCIMGMAKAGTITEL-PSHNGDSIFIETSCKSTRYRTVCVQSLLPYAYKIQRSPLQMALEALSVSLSRTKSADSF--VSNLVK-HKDLKPREQQPIDDCLKLMGDSIDRLSKSVQELRGISGANDRDFLWHISNVQTWVSAALTDDDTCLDGLA--ALDGEVKDSIRTRVSNVAEVTSNALALVDQLAKTHL 642
            + A +A L +A       G +KA     L PS +     + +SC STRY  +C+ +++  A  ++ +  +  +EA SV+L+ T    ++  V  L+K  K L PRE+  + DCL+ + +++D L ++V++L        +    H  +++T +S+A+T+ +TCLDG +    D +V+ ++     +V  + SNALA++  +  T +
Sbjct:   23 LSAAVALLFVAAVAGISAGASKANEKRTLSPSSHA---VLRSSCSSTRYPELCISAVVT-AGGVELTSQKDVIEA-SVNLTITAVEHNYFTVKKLIKKRKGLTPREKTALHDCLETIDETLDELHETVEDLH--LYPTKKTLREHAGDLKTLISSAITNQETCLDGFSHDDADKQVRKALLKGQIHVEHMCSNALAMIKNMTDTDI 221          
BLAST of CN184697 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.752e-12
Identity = 52/219 (23.74%), Postives = 111/219 (50.68%), Query Frame = 1
Query:   52 RIANLLLALPVLCIMGMAKAGTITELPSHNGDS--------------IFIETSCKSTRYRTVCVQSLL---PYAYKI--QRSPLQMALEALSVSLSRTKSADSFVSNLVK-HKDLKPREQQPIDDCLKLMGDSIDRLSKSVQELRGISGANDRDFLWHISNVQTWVSAALTDDDTCLDGLA--ALDGEVKDSIRTRVSNVAEVTSNALALVDQLAKTHL 642
            R   + LA+    ++  A  G +  + SH+ +S                ++++C +T +  +C  +++    ++ K+  Q+  ++++L     ++ R   A   V  L+K  K L PRE+  + DCL+ M +++D L  +V++L      N +    H+ +++T +S+A+T+ +TCLDG +    D +V+  +     +V ++ SNALA++  +  T +
Sbjct:   17 RKKKIYLAIVASVLLVAAVIGVVAGVKSHSKNSDDHADIMAISSSAHAIVKSACSNTLHPELCYSAIVNVSDFSKKVTSQKDVIELSLNITVKAVRRNYYA---VKELIKTRKGLTPREKVALHDCLETMDETLDELHTAVEDLELYP--NKKSLKEHVEDLKTLISSAITNQETCLDGFSHDEADKKVRKVLLKGQKHVEKMCSNALAMICNMTDTDI 230          
BLAST of CN184697 vs. ExPASy Swiss-Prot
Match: PME2_ARATH (Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 9.811e-12
Identity = 58/208 (27.88%), Postives = 103/208 (49.52%), Query Frame = 1
Query:   49 ARIANLLLALPVLCIMGMAKAGT-------ITELPSHNGDSIFIETSCKSTRYRTVCVQSLLPYAYKIQRSPLQMALEALSVSLSRTKSADSFVSNLV-KHKDLKPREQQPIDDCLKLMGDSIDRLSKSVQELRGISGANDRDFLWHISNVQTWVSAALTDDDTCLDGLA--ALDGEVKDSIRTRVSNVAEVTSNALALVDQLAKTHL 642
            A IA LLLA     I+G+A   T       IT L S +     +++ C ST Y  +C  ++     K   S  ++   +L+++    K     V  L+ K K L PRE   + DCL+ + +++D L  +V++L        +    H  +++T +S+A+T+  TCLDG +    D +V+ ++     +V  + SNALA++  + +T +
Sbjct:   25 AAIALLLLA----SIVGIAATTTNQNKNQKITTLSSTS--HAILKSVCSSTLYPELCFSAVAATGGKELTSQKEVIEASLNLTTKAVKHNYFAVKKLIAKRKGLTPREVTALHDCLETIDETLDELHVAVEDLH--QYPKQKSLRKHADDLKTLISSAITNQGTCLDGFSYDDADRKVRKALLKGQVHVEHMCSNALAMIKNMTETDI 224          
BLAST of CN184697 vs. ExPASy Swiss-Prot
Match: PME21_ARATH (Probable pectinesterase/pectinesterase inhibitor 21 OS=Arabidopsis thaliana GN=PME21 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.281e-11
Identity = 48/205 (23.41%), Postives = 96/205 (46.83%), Query Frame = 1
Query:   64 LLLALPVLCIMGMAKAGTI-TELPSHNGDSI----------FIETSCKSTRYRTVCVQSLLPYAYKIQRSPLQMALEALSVSLSRTKSADSFVSNLVKHKDLKPREQQPIDDCLKLMGDSIDRLSKSVQELRGISGANDRDFLWHIS-----NVQTWVSAALTDDDTCLDGLAALDGEVKDSIRTRVSNVAEVTSNALALVDQLA 630
            +++ +  + ++ M  A T+   L  H+GDS            ++  C  T YR  C  +L+    K    P+++   A +V++ +   A    S  +       R +  +D C +LM  ++D LS S +EL          F +H+      N++ W+SAA++ ++TCL+G     G   ++++  +    E+T N LA++ +++
Sbjct:   16 IVITISSVLLISMVVAVTVGVSLNKHDGDSKGKAEVNASVKAVKDVCAPTDYRKTCEDTLIKNG-KNTTDPMELVKTAFNVTMKQITDAAK-KSQTIMELQKDSRTRMALDQCKELMDYALDELSNSFEELG--------KFEFHLLDEALINLRIWLSAAISHEETCLEGFQGTQGNAGETMKKALKTAIELTHNGLAIISEMS 210          
The following BLAST results are available for this feature:
BLAST of CN184697 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
21KD_DAUCA2.478e-3951.2221 kDa protein OS=Daucus carota PE=2 SV=1[more]
PME61_ARATH1.463e-1528.21Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME3_PHAVU7.259e-1532.30Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=... [more]
PME3_CITSI9.481e-1525.12Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1[more]
PME1_CITSI9.481e-1525.12Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE... [more]
PME34_ARATH6.145e-1431.17Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME3_ARATH5.202e-1328.16Pectinesterase/pectinesterase inhibitor 3 OS=Arabi... [more]
PMEU1_SOLLC5.752e-1223.74Pectinesterase/pectinesterase inhibitor U1 OS=Sola... [more]
PME2_ARATH9.811e-1227.88Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 P... [more]
PME21_ARATH1.281e-1123.41Probable pectinesterase/pectinesterase inhibitor 2... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_0005O18_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005O18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184697 ID=CN184697; Name=CN184697; organism=Citrus sinensis; type=EST; length=694bp
CTTTAAGAAAGAACAAACAGTTGCTATCTAAATCATAATCCAATCATGGC
AAGAATTGCCAATCTCTTGTTGGCACTCCCTGTTTTATGCATTATGGGCA
TGGCCAAAGCAGGCACAATCACTGAGCTACCTAGTCATAATGGTGACTCA
ATCTTCATTGAAACATCATGCAAATCCACCAGATATCGCACAGTCTGCGT
GCAATCTCTCTTGCCTTACGCCTACAAAATCCAACGAAGCCCGCTGCAGA
TGGCGCTGGAAGCCTTGTCCGTGAGCCTCTCCAGGACTAAGTCCGCAGAC
TCATTTGTGTCAAATCTTGTAAAACACAAGGACTTGAAGCCAAGGGAGCA
ACAACCAATTGACGACTGCCTGAAGTTGATGGGTGATTCGATTGACCGGC
TTAGCAAGTCGGTTCAAGAACTGAGAGGAATCAGTGGAGCAAATGATCGT
GACTTTTTGTGGCACATTAGCAATGTTCAAACATGGGTTAGTGCTGCTTT
GACTGATGATGATACTTGTCTTGATGGGCTGGCCGCCTTGGATGGTGAGG
TGAAGGATTCCATTAGGACTAGGGTTTCAAATGTTGCTGAAGTCACCAGC
AATGCACTTGCCTTGGTTGACCAGCTTGCCAAAACACATTTAGAATAACG
GTGAATGTTTGTTGATATTTGATAATAAAGCATTATTGCATTTG
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