CN184693

Overview
NameCN184693
Unique NameCN184693
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length607
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12532 contig Csv1_Contig12532:88..694. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN184693 vs. ExPASy Swiss-Prot
Match: RS15_ELAOL (40S ribosomal protein S15 OS=Elaeis oleifera GN=RPS15 PE=2 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 2.230e-72
Identity = 133/147 (90.48%), Postives = 137/147 (93.20%), Query Frame = -3
Query:  162 AAGAAAGQPKKRTFKKFSFRGVDLDALLDMSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPDPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 602
            A      QPKKRTF+KFS+RGVDLD LLDM TDEL KLF ARARRRFQRGLKRKPMALIKKLRKAKR+APPGEKP+PVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct:    7 AVDVGGAQPKKRTFRKFSYRGVDLDQLLDMGTDELVKLFHARARRRFQRGLKRKPMALIKKLRKAKRDAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 153          
BLAST of CN184693 vs. ExPASy Swiss-Prot
Match: RS154_ARATH (40S ribosomal protein S15-4 OS=Arabidopsis thaliana GN=RPS15D PE=2 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 1.107e-71
Identity = 132/144 (91.67%), Postives = 138/144 (95.83%), Query Frame = -3
Query:  162 AAAGQPKKRTFKKFSFRGVDLDALLDMSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPDPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 593
            AAAG PKKRTFKKF+F+GVDLDALLDMSTD+L KLFS+R RRRF RGL RKPMALIKKLRKAKREAP GEKP+PVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPG+GATHSSRFIPLK
Sbjct:    9 AAAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGVGATHSSRFIPLK 152          
BLAST of CN184693 vs. ExPASy Swiss-Prot
Match: RS151_ARATH (40S ribosomal protein S15-1 OS=Arabidopsis thaliana GN=RPS15A PE=1 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 1.107e-71
Identity = 132/144 (91.67%), Postives = 138/144 (95.83%), Query Frame = -3
Query:  162 AAAGQPKKRTFKKFSFRGVDLDALLDMSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPDPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 593
            AAAG PKKRTFKKF+F+GVDLDALLDMSTD+L KLFS+R RRRF RGL RKPMALIKKLRKAKREAP GEKP+PVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPG+GATHSSRFIPLK
Sbjct:    9 AAAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRKAKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGVGATHSSRFIPLK 152          
BLAST of CN184693 vs. ExPASy Swiss-Prot
Match: RS15_ORYSJ (40S ribosomal protein S15 OS=Oryza sativa subsp. japonica GN=RPS15 PE=2 SV=2)

HSP 1 Score: 268.47 bits (685), Expect = 1.888e-71
Identity = 130/144 (90.28%), Postives = 139/144 (96.53%), Query Frame = -3
Query:  162 AAAGQPKKRTFKKFSFRGVDLDALLDMSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPDPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 593
            AA  QPKKRTF+K+S+RGVDLDALLDMSTD+L +LF ARARRRFQRGLKRKPMALIKKLRKAK++AP GEKP+PVRTHLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct:   11 AAGAQPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRKAKKDAPAGEKPEPVRTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 154          
BLAST of CN184693 vs. ExPASy Swiss-Prot
Match: RS15_PICMA (40S ribosomal protein S15 OS=Picea mariana GN=RPS15 PE=2 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 4.206e-71
Identity = 131/140 (93.57%), Postives = 137/140 (97.86%), Query Frame = -3
Query:  162 QPKKRTFKKFSFRGVDLDALLDMSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPDPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 581
            QPKKRTFKKFS+RGVDLDALLDM+++EL KLF ARARRRFQRGLKR+PMALIKKLRKAKREAP GEKP+PVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct:   12 QPKKRTFKKFSYRGVDLDALLDMTSEELVKLFHARARRRFQRGLKRQPMALIKKLRKAKREAPSGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 151          
BLAST of CN184693 vs. ExPASy Swiss-Prot
Match: RS153_ARATH (40S ribosomal protein S15-3 OS=Arabidopsis thaliana GN=RPS15C PE=2 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 2.160e-67
Identity = 128/144 (88.89%), Postives = 133/144 (92.36%), Query Frame = -3
Query:  162 AAAGQPKKRTFKKFSFRGVDLDALLDMSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPDPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 593
            AAAG  KKRTFKKFSFRGVDLDALLDMSTD+L KLF +R RRRF RGL RKPMALIKKLRKAK EAP GEKP  VRTHLRNMIIVPEMIGS+IGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPG+GAT+SSRFIPLK
Sbjct:    7 AAAGIVKKRTFKKFSFRGVDLDALLDMSTDDLVKLFPSRIRRRFSRGLTRKPMALIKKLRKAKIEAPAGEKPAAVRTHLRNMIIVPEMIGSVIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGVGATNSSRFIPLK 150          
BLAST of CN184693 vs. ExPASy Swiss-Prot
Match: RS155_ARATH (40S ribosomal protein S15-5 OS=Arabidopsis thaliana GN=RPS15E PE=2 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 6.949e-66
Identity = 126/143 (88.11%), Postives = 131/143 (91.61%), Query Frame = -3
Query:  162 AAGQPKKRTFKKFSFRGVDLDALLDMSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPDPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 590
            AAG  KKRTFKKFSFRGVDLDALLDMS ++L K FS+R RRRF RGL RKPMALIKKLRKAK EAP GEKP  VRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPG+GAT+SSRFIPLK
Sbjct:    7 AAGIVKKRTFKKFSFRGVDLDALLDMSIEDLVKHFSSRIRRRFSRGLTRKPMALIKKLRKAKMEAPAGEKPASVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGVGATNSSRFIPLK 149          
BLAST of CN184693 vs. ExPASy Swiss-Prot
Match: RS152_ARATH (40S ribosomal protein S15-2 OS=Arabidopsis thaliana GN=RPS15B PE=2 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 3.228e-63
Identity = 117/144 (81.25%), Postives = 130/144 (90.28%), Query Frame = -3
Query:  162 AAAGQPKKRTFKKFSFRGVDLDALLDMSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPDPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 593
            +AA   KKRTFKKFSF+GVDLDALLDM TD+L +LF +R RRR  RGL RKPMALIKKLRKAK +AP GEKP+ VRTHLRNM+I+PEMIGSIIGVYNGKTFNQ+EIKPEMIGHYLAEFSI+YKPV+HG+PG GATHSSRFIPLK
Sbjct:    9 SAAALAKKRTFKKFSFKGVDLDALLDMPTDDLVELFPSRIRRRMSRGLTRKPMALIKKLRKAKLDAPAGEKPEVVRTHLRNMVIMPEMIGSIIGVYNGKTFNQIEIKPEMIGHYLAEFSITYKPVRHGKPGHGATHSSRFIPLK 152          
BLAST of CN184693 vs. ExPASy Swiss-Prot
Match: RS15_PODAN (40S ribosomal protein S15 OS=Podospora anserina GN=RPS15 PE=3 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 6.730e-61
Identity = 112/146 (76.71%), Postives = 129/146 (88.36%), Query Frame = -3
Query:  162 AGAAAGQPKKRTFKKFSFRGVDLDALLDMSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPDPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 599
            A  AA   KKRTF+KFS+RGVDLDALLD+++DEL  +  ARARR+  RGLKR+PM LIKKLRKAK+EA P EKPD V+THLR+MI+VPEMIGS++G+Y+GK FNQVEIKPEM+GHYL EFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct:    7 AEEAAELKKKRTFRKFSYRGVDLDALLDLTSDELRDVVHARARRKINRGLKRRPMGLIKKLRKAKQEAKPNEKPDLVKTHLRDMIVVPEMIGSVVGIYSGKEFNQVEIKPEMVGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 152          
BLAST of CN184693 vs. ExPASy Swiss-Prot
Match: RS15_RAT (40S ribosomal protein S15 OS=Rattus norvegicus GN=Rps15 PE=1 SV=2)

HSP 1 Score: 229.565 bits (584), Expect = 9.719e-60
Identity = 109/144 (75.69%), Postives = 129/144 (89.58%), Query Frame = -3
Query:  162 AAAGQPKKRTFKKFSFRGVDLDALLDMSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPDPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 593
            A   Q KKRTF+KF++RGVDLD LLDMS ++L +L+SAR RRR  RGL+RK  +L+K+LRKAK+EAPP EKP+ V+THLR+MII+PEM+GS++GVYNGKTFNQVEIKPEMIGHYL EFSI+YKPVKHGRPGIGATHSSRFIPLK
Sbjct:    2 AEVEQKKKRTFRKFTYRGVDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLRKAKKEAPPMEKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 145          
The following BLAST results are available for this feature:
BLAST of CN184693 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
RS15_ELAOL2.230e-7290.4840S ribosomal protein S15 OS=Elaeis oleifera GN=RP... [more]
RS154_ARATH1.107e-7191.6740S ribosomal protein S15-4 OS=Arabidopsis thalian... [more]
RS151_ARATH1.107e-7191.6740S ribosomal protein S15-1 OS=Arabidopsis thalian... [more]
RS15_ORYSJ1.888e-7190.2840S ribosomal protein S15 OS=Oryza sativa subsp. j... [more]
RS15_PICMA4.206e-7193.5740S ribosomal protein S15 OS=Picea mariana GN=RPS1... [more]
RS153_ARATH2.160e-6788.8940S ribosomal protein S15-3 OS=Arabidopsis thalian... [more]
RS155_ARATH6.949e-6688.1140S ribosomal protein S15-5 OS=Arabidopsis thalian... [more]
RS152_ARATH3.228e-6381.2540S ribosomal protein S15-2 OS=Arabidopsis thalian... [more]
RS15_PODAN6.730e-6176.7140S ribosomal protein S15 OS=Podospora anserina GN... [more]
RS15_RAT9.719e-6075.6940S ribosomal protein S15 OS=Rattus norvegicus GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005O14_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005O14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184693 ID=CN184693; Name=CN184693; organism=Citrus sinensis; type=EST; length=607bp
CGTTAAGCATTACTCTTGAGCAGAATATCCTTCAAAACTATTTTGCATCA
CACTCTTTCAAAAGCTTTAATTAAAACTGAATCGACAAAAACAGGCAGGT
CCAAAATCATTTTTTGGAGGACAAAACATACCCTCCATAAGGACAGCATG
CAAAATCTTCACTTCAGAGGAATGAACCTAGAAGAGTGGGTAGCACCAAT
ACCAGGTCTTCCGTGCTTAACTGGCTTGTATGAGATCGAGAACTCAGCTA
GATAATGTCCAATCATTTCGGGCTTAATTTCAACTTGATTAAAGGTCTTG
CCATTGTAAACACCAATTATACTACCGATCATTTCAGGCACAATGATCAT
GTTGCGAAGATGAGTCCTAACTGGATCAGGCTTCTCGCCGGGTGGAGCTT
CCCTTTTCGCCTTGCGCAACTTCTTGATCAACGCCATAGGCTTCCTTTTC
AACCCCCTCTGAAACCTTCTGCGAGCACGGGCGCTAAATAGCTTGGCGAG
CTCATCAGTAGACATGTCCAAAAGAGCGTCCAAATCAACACCTCTGAAGC
TGAACTTCTTGAATGTCCTCTTCTTTGGCTGTCCTGCAGCAGCACCAGCA
GCAACCC
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