CN184692
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN184692 vs. ExPASy Swiss-Prot
Match: RS15_ELAOL (40S ribosomal protein S15 OS=Elaeis oleifera GN=RPS15 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 1.780e-40 Identity = 70/74 (94.59%), Postives = 71/74 (95.95%), Query Frame = 3 Query: 141 MSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKT 362 M TDEL KLF ARARRRFQRGLKRKPMALIKKLRKAKR+APPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKT Sbjct: 36 MGTDELVKLFHARARRRFQRGLKRKPMALIKKLRKAKRDAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKT 109 HSP 2 Score: 45.4394 bits (106), Expect = 1.780e-40 Identity = 24/37 (64.86%), Postives = 26/37 (70.27%), Query Frame = 2 Query: 29 MADVETGVXXXXXXXQPKKRTFKKFSFRGVDLDALLD 139 MADV V QPKKRTF+KFS+RGVDLD LLD Sbjct: 1 MADVSDAVDVGGA--QPKKRTFRKFSYRGVDLDQLLD 35
BLAST of CN184692 vs. ExPASy Swiss-Prot
Match: RS15_PICMA (40S ribosomal protein S15 OS=Picea mariana GN=RPS15 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 8.714e-40 Identity = 67/74 (90.54%), Postives = 71/74 (95.95%), Query Frame = 3 Query: 141 MSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKT 362 M+++EL KLF ARARRRFQRGLKR+PMALIKKLRKAKREAP GEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKT Sbjct: 34 MTSEELVKLFHARARRRFQRGLKRQPMALIKKLRKAKREAPSGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKT 107 HSP 2 Score: 49.2914 bits (116), Expect = 8.714e-40 Identity = 26/39 (66.67%), Postives = 29/39 (74.36%), Query Frame = 2 Query: 23 LAMADVETGVXXXXXXXQPKKRTFKKFSFRGVDLDALLD 139 +A ADV+ G QPKKRTFKKFS+RGVDLDALLD Sbjct: 1 MADADVDVG------PVQPKKRTFKKFSYRGVDLDALLD 33
BLAST of CN184692 vs. ExPASy Swiss-Prot
Match: RS15_ORYSJ (40S ribosomal protein S15 OS=Oryza sativa subsp. japonica GN=RPS15 PE=2 SV=2) HSP 1 Score: 136.346 bits (342), Expect = 5.550e-39 Identity = 66/74 (89.19%), Postives = 71/74 (95.95%), Query Frame = 3 Query: 141 MSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKT 362 MSTD+L +LF ARARRRFQRGLKRKPMALIKKLRKAK++AP GEKPEPVRTHLRNMIIVPEMIGSI+GVYNGKT Sbjct: 37 MSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRKAKKDAPAGEKPEPVRTHLRNMIIVPEMIGSIVGVYNGKT 110 HSP 2 Score: 46.2098 bits (108), Expect = 5.550e-39 Identity = 24/37 (64.86%), Postives = 27/37 (72.97%), Query Frame = 2 Query: 29 MADVETGVXXXXXXXQPKKRTFKKFSFRGVDLDALLD 139 MADVE QPKKRTF+K+S+RGVDLDALLD Sbjct: 1 MADVEVETEVAAGA-QPKKRTFRKYSYRGVDLDALLD 36
BLAST of CN184692 vs. ExPASy Swiss-Prot
Match: RS154_ARATH (40S ribosomal protein S15-4 OS=Arabidopsis thaliana GN=RPS15D PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.228e-38 Identity = 67/74 (90.54%), Postives = 69/74 (93.24%), Query Frame = 3 Query: 141 MSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKT 362 MSTD+L KLFS+R RRRF RGL RKPMALIKKLRKAKREAP GEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKT Sbjct: 35 MSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKT 108 HSP 2 Score: 46.2098 bits (108), Expect = 1.228e-38 Identity = 25/37 (67.57%), Postives = 27/37 (72.97%), Query Frame = 2 Query: 29 MADVETGVXXXXXXXQPKKRTFKKFSFRGVDLDALLD 139 MADVE V PKKRTFKKF+F+GVDLDALLD Sbjct: 1 MADVEPEVAAAGV---PKKRTFKKFAFKGVDLDALLD 34
BLAST of CN184692 vs. ExPASy Swiss-Prot
Match: RS151_ARATH (40S ribosomal protein S15-1 OS=Arabidopsis thaliana GN=RPS15A PE=1 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.228e-38 Identity = 67/74 (90.54%), Postives = 69/74 (93.24%), Query Frame = 3 Query: 141 MSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKT 362 MSTD+L KLFS+R RRRF RGL RKPMALIKKLRKAKREAP GEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKT Sbjct: 35 MSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRKAKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKT 108 HSP 2 Score: 46.2098 bits (108), Expect = 1.228e-38 Identity = 25/37 (67.57%), Postives = 27/37 (72.97%), Query Frame = 2 Query: 29 MADVETGVXXXXXXXQPKKRTFKKFSFRGVDLDALLD 139 MADVE V PKKRTFKKF+F+GVDLDALLD Sbjct: 1 MADVEPEVAAAGV---PKKRTFKKFAFKGVDLDALLD 34
BLAST of CN184692 vs. ExPASy Swiss-Prot
Match: RS153_ARATH (40S ribosomal protein S15-3 OS=Arabidopsis thaliana GN=RPS15C PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 1.286e-34 Identity = 62/74 (83.78%), Postives = 65/74 (87.84%), Query Frame = 3 Query: 141 MSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKT 362 MSTD+L KLF +R RRRF RGL RKPMALIKKLRKAK EAP GEKP VRTHLRNMIIVPEMIGS+IGVYNGKT Sbjct: 33 MSTDDLVKLFPSRIRRRFSRGLTRKPMALIKKLRKAKIEAPAGEKPAAVRTHLRNMIIVPEMIGSVIGVYNGKT 106 HSP 2 Score: 43.5134 bits (101), Expect = 1.286e-34 Identity = 20/20 (100.00%), Postives = 20/20 (100.00%), Query Frame = 2 Query: 80 KKRTFKKFSFRGVDLDALLD 139 KKRTFKKFSFRGVDLDALLD Sbjct: 13 KKRTFKKFSFRGVDLDALLD 32
BLAST of CN184692 vs. ExPASy Swiss-Prot
Match: RS155_ARATH (40S ribosomal protein S15-5 OS=Arabidopsis thaliana GN=RPS15E PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 1.389e-33 Identity = 61/74 (82.43%), Postives = 64/74 (86.49%), Query Frame = 3 Query: 141 MSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKT 362 MS ++L K FS+R RRRF RGL RKPMALIKKLRKAK EAP GEKP VRTHLRNMIIVPEMIGSIIGVYNGKT Sbjct: 32 MSIEDLVKHFSSRIRRRFSRGLTRKPMALIKKLRKAKMEAPAGEKPASVRTHLRNMIIVPEMIGSIIGVYNGKT 105 HSP 2 Score: 43.5134 bits (101), Expect = 1.389e-33 Identity = 20/20 (100.00%), Postives = 20/20 (100.00%), Query Frame = 2 Query: 80 KKRTFKKFSFRGVDLDALLD 139 KKRTFKKFSFRGVDLDALLD Sbjct: 12 KKRTFKKFSFRGVDLDALLD 31
BLAST of CN184692 vs. ExPASy Swiss-Prot
Match: RS152_ARATH (40S ribosomal protein S15-2 OS=Arabidopsis thaliana GN=RPS15B PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 8.824e-33 Identity = 58/74 (78.38%), Postives = 64/74 (86.49%), Query Frame = 3 Query: 141 MSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKT 362 M TD+L +LF +R RRR RGL RKPMALIKKLRKAK +AP GEKPE VRTHLRNM+I+PEMIGSIIGVYNGKT Sbjct: 35 MPTDDLVELFPSRIRRRMSRGLTRKPMALIKKLRKAKLDAPAGEKPEVVRTHLRNMVIMPEMIGSIIGVYNGKT 108 HSP 2 Score: 43.1282 bits (100), Expect = 8.824e-33 Identity = 24/37 (64.86%), Postives = 26/37 (70.27%), Query Frame = 2 Query: 29 MADVETGVXXXXXXXQPKKRTFKKFSFRGVDLDALLD 139 MA+VE V KKRTFKKFSF+GVDLDALLD Sbjct: 1 MAEVEPDVSAAALA---KKRTFKKFSFKGVDLDALLD 34
BLAST of CN184692 vs. ExPASy Swiss-Prot
Match: RS15_XENLA (40S ribosomal protein S15 OS=Xenopus laevis GN=rps15 PE=2 SV=3) HSP 1 Score: 102.449 bits (254), Expect = 1.279e-27 Identity = 46/73 (63.01%), Postives = 63/73 (86.30%), Query Frame = 3 Query: 141 MSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGK 359 MS +++ +L+ AR RRR RGL+RK +L+K+LRKAK+EAPP EKPE ++THLR+MII+PEM+GS++GVYNGK Sbjct: 28 MSYEQVMQLYCARQRRRLNRGLRRKQNSLLKRLRKAKKEAPPMEKPEVIKTHLRDMIILPEMVGSMVGVYNGK 100 HSP 2 Score: 41.9726 bits (97), Expect = 1.279e-27 Identity = 19/25 (76.00%), Postives = 21/25 (84.00%), Query Frame = 2 Query: 74 QPKKRTFKKFSFRGVDLDALLDHVY 148 Q KKRTFKKF++RGVDLD LLD Y Sbjct: 6 QKKKRTFKKFTYRGVDLDQLLDMSY 30
BLAST of CN184692 vs. ExPASy Swiss-Prot
Match: RS15_XIPMA (40S ribosomal protein S15 OS=Xiphophorus maculatus GN=rps15 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 4.782e-27 Identity = 47/74 (63.51%), Postives = 63/74 (85.14%), Query Frame = 3 Query: 141 MSTDELAKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKT 362 MS ++L +L+ AR RRR RGL+RK +L+K+L KAK+EAPP EKPE V+THLR+M+I+PEM+GS++GVYNGKT Sbjct: 28 MSYEQLMQLYCARQRRRLNRGLRRKHQSLLKRLPKAKKEAPPMEKPEVVKTHLRDMVILPEMVGSMVGVYNGKT 101 HSP 2 Score: 39.2762 bits (90), Expect = 4.782e-27 Identity = 17/23 (73.91%), Postives = 20/23 (86.96%), Query Frame = 2 Query: 80 KKRTFKKFSFRGVDLDALLDHVY 148 KKRTF+KF++RGVDLD LLD Y Sbjct: 8 KKRTFRKFTYRGVDLDQLLDMSY 30 The following BLAST results are available for this feature:
BLAST of CN184692 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184692 ID=CN184692; Name=CN184692; organism=Citrus sinensis; type=EST; length=364bpback to top |