CN184663

Overview
NameCN184663
Unique NameCN184663
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length667
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CN184663 vs. ExPASy Swiss-Prot
Match: C2D61_ARATH (C2 domain-containing protein At1g53590 OS=Arabidopsis thaliana GN=NTMC2T6.1 PE=1 SV=1)

HSP 1 Score: 322.783 bits (826), Expect = 1.013e-87
Identity = 148/196 (75.51%), Postives = 177/196 (90.31%), Query Frame = 2 
Query:   80 MEISIMHHVGIVLFLLWLLSYFDRCHPAAYFISLIYLYSVHDRYVMRLRRKVEFEERKNSFQRRVLKDSETVRWLNHAIEKMWPICMEQIASQKLLLPIIPWFLEKYKPWTAKKALVQHLYLGRNPPMLTEMRVLRQSNDDDHMVLELGMNFLTADDMSAILAVKLRKRLGFGMWAKMHVTGMHVEGKVLVGVKFL 667
            ME S++HH+ IVL LLW +S  +R H   YF++LIYLY VH+RYVMRL+RK++FEERK + QRRVL DSE+VRW+N+A+EK+WPICMEQIASQK+L PIIPWFLEKY+PWTAKKA++QHLY+GRNPP+LT++RVLRQS  DDH+VLELGMNFL ADDMSAILAVKLRKRLGFGMW K+H+TGMHVEGKVL+GVKFL
Sbjct:    1 MESSLIHHIIIVLLLLWFISSLNRSHAFFYFLALIYLYLVHERYVMRLKRKLQFEERKQANQRRVLSDSESVRWMNYAVEKIWPICMEQIASQKILGPIIPWFLEKYRPWTAKKAVIQHLYMGRNPPLLTDIRVLRQSTGDDHLVLELGMNFLAADDMSAILAVKLRKRLGFGMWTKLHLTGMHVEGKVLIGVKFL 196
The following BLAST results are available for this feature:
BLAST of CN184663 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
C2D61_ARATH1.013e-8775.51C2 domain-containing protein At1g53590 OS=Arabidop... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_0005N18_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005N18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184663 ID=CN184663; Name=CN184663; organism=Citrus sinensis; type=EST; length=667bp
GAGGCTTGAATTAGGTCACGTGAAGAACGAAGGGAGAAATATTTGTTGAT
AAAAGCAAAGAACAAAAAAGATGAGTTTGATGGAGATATCAATAATGCAC
CATGTGGGCATTGTTTTGTTTTTGCTTTGGTTGCTTTCTTACTTCGATCG
TTGCCACCCAGCTGCTTATTTCATCTCTCTAATCTATCTGTACTCGGTTC
ATGATCGATACGTCATGAGATTGAGGAGGAAAGTGGAGTTCGAGGAGAGA
AAGAATTCTTTTCAAAGAAGGGTGCTTAAAGATTCTGAAACGGTAAGATG
GTTGAATCATGCTATTGAAAAGATGTGGCCCATATGCATGGAACAAATTG
CTTCACAGAAGTTACTTCTCCCCATTATACCATGGTTTTTGGAGAAGTAC
AAACCATGGACTGCAAAGAAAGCTTTGGTTCAGCATCTGTACCTGGGTAG
AAACCCCCCAATGCTTACAGAAATGAGAGTTCTTCGCCAATCCAATGATG
ATGACCACATGGTATTAGAGTTGGGAATGAACTTTCTCACAGCAGATGAT
ATGAGTGCAATACTTGCTGTGAAATTAAGGAAAAGACTGGGATTTGGAAT
GTGGGCCAAGATGCATGTGACTGGCATGCATGTTGAGGGGAAGGTTCTGG
TTGGAGTGAAGTTTCTT
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