CN184656
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN184656 vs. ExPASy Swiss-Prot
Match: IF4E1_ARATH (Eukaryotic translation initiation factor 4E-1 OS=Arabidopsis thaliana GN=EIF4E1 PE=2 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 1.542e-42 Identity = 79/102 (77.45%), Postives = 90/102 (88.24%), Query Frame = -1 Query: 193 CANGGKWTVIFPIGKSDTSWLYTLLAMIGEQFDHGDEICGAVVNVRARQEKISLWTKNASNEAAQMSIGKQWKELLDYSDTIGFIFHEDAKH-DNRSKNRYT 495 CANGGKWT+ FP KSD SWLYTLLA+IGEQFDHGDEICGAVVN+R +QE+IS+WTKNASNEAAQ+SIGKQWKE LDY+++IGFI HEDAK D +KN YT Sbjct: 133 CANGGKWTMTFPKEKSDKSWLYTLLALIGEQFDHGDEICGAVVNIRGKQERISIWTKNASNEAAQVSIGKQWKEFLDYNNSIGFIIHEDAKKLDRNAKNAYT 234
BLAST of CN184656 vs. ExPASy Swiss-Prot
Match: IF4E1_WHEAT (Eukaryotic translation initiation factor 4E-1 OS=Triticum aestivum PE=1 SV=3) HSP 1 Score: 162.155 bits (409), Expect = 1.222e-39 Identity = 76/102 (74.51%), Postives = 87/102 (85.29%), Query Frame = -1 Query: 193 CANGGKWTVIFPIGKSDTSWLYTLLAMIGEQFDHGDEICGAVVNVRARQEKISLWTKNASNEAAQMSIGKQWKELLDYSDTIGFIFHEDAKH-DNRSKNRYT 495 CANGGKWT+ GKSDT WL+TLLAMIGEQFD GDEICGAVV+VR +QE++++WTKNA+NEAAQ+SIGKQWKE LDY D+IGFI HEDAK D KNRYT Sbjct: 113 CANGGKWTISCGRGKSDTFWLHTLLAMIGEQFDFGDEICGAVVSVRQKQERVAIWTKNAANEAAQISIGKQWKEFLDYKDSIGFIVHEDAKRSDKGPKNRYT 214
BLAST of CN184656 vs. ExPASy Swiss-Prot
Match: IF4E1_MAIZE (Eukaryotic translation initiation factor 4E-1 OS=Zea mays PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 2.084e-39 Identity = 76/102 (74.51%), Postives = 88/102 (86.27%), Query Frame = -1 Query: 193 CANGGKWTVIFPIGKSDTSWLYTLLAMIGEQFDHGDEICGAVVNVRARQEKISLWTKNASNEAAQMSIGKQWKELLDYSDTIGFIFHEDAKH-DNRSKNRYT 495 CANGGKWT+ GKSDT WL+TLLAMIGEQFD+GDEICGAVV+VR +QE+I++WTKNA+NEAAQ+SIGKQWKELLDY D+IGFI H+DAK D K RYT Sbjct: 116 CANGGKWTISCGRGKSDTFWLHTLLAMIGEQFDYGDEICGAVVSVRGKQERIAIWTKNAANEAAQVSIGKQWKELLDYKDSIGFIVHDDAKKMDKGLKERYT 217
BLAST of CN184656 vs. ExPASy Swiss-Prot
Match: IF4E1_ORYSJ (Eukaryotic translation initiation factor 4E-1 OS=Oryza sativa subsp. japonica GN=Os01g0970400 PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 2.722e-39 Identity = 76/102 (74.51%), Postives = 87/102 (85.29%), Query Frame = -1 Query: 193 CANGGKWTVIFPIGKSDTSWLYTLLAMIGEQFDHGDEICGAVVNVRARQEKISLWTKNASNEAAQMSIGKQWKELLDYSDTIGFIFHEDAKH-DNRSKNRYT 495 CANGGKWT GKSDT WL+TLLAMIGEQFD+GDEICGAVV+VR +QE+I++WTKNA+NEAAQ+SIGKQWKE LDY D+IGFI H+DAK D KNRYT Sbjct: 125 CANGGKWTFSCGRGKSDTMWLHTLLAMIGEQFDYGDEICGAVVSVRGKQERIAIWTKNAANEAAQISIGKQWKEFLDYKDSIGFIVHDDAKKMDKGLKNRYT 226
BLAST of CN184656 vs. ExPASy Swiss-Prot
Match: IF4E4_ARATH (Putative eukaryotic translation initiation factor 4E-4 OS=Arabidopsis thaliana GN=At1g29550 PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 2.817e-36 Identity = 70/102 (68.63%), Postives = 85/102 (83.33%), Query Frame = -1 Query: 193 CANGGKWTVIFPIGKSDTSWLYTLLAMIGEQFDHGDEICGAVVNVRARQEKISLWTKNASNEAAQMSIGKQWKELLDYSDTIGFIFHEDAKH-DNRSKNRYT 495 CANGGKW+++FP + +WL TLLA++GEQFD GDEICGAV+N RAR ++ISLWTKNA+NE AQ+SIGKQWKELL Y++TIGFI HEDAK D +K RYT Sbjct: 138 CANGGKWSMMFPKATLECNWLNTLLALVGEQFDQGDEICGAVLNFRARGDRISLWTKNAANEEAQLSIGKQWKELLGYNETIGFIVHEDAKTLDRDAKRRYT 239
BLAST of CN184656 vs. ExPASy Swiss-Prot
Match: IF4E5_ARATH (Eukaryotic translation initiation factor 4E-5 OS=Arabidopsis thaliana GN=At1g29590 PE=2 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 3.679e-36 Identity = 70/102 (68.63%), Postives = 83/102 (81.37%), Query Frame = -1 Query: 193 CANGGKWTVIFPIGKSDTSWLYTLLAMIGEQFDHGDEICGAVVNVRARQEKISLWTKNASNEAAQMSIGKQWKELLDYSDTIGFIFHEDAKH-DNRSKNRYT 495 CANGGKWT+ FP +++WL TLLA++GEQFD GDEICGAV+N R R ++ISLWTK A+NE AQ+SIGKQWKELL Y+DTIGFI HEDAK D +K RYT Sbjct: 138 CANGGKWTMFFPRATLESNWLNTLLALVGEQFDQGDEICGAVLNFRTRGDRISLWTKKAANEEAQLSIGKQWKELLGYNDTIGFIVHEDAKTLDRDAKRRYT 239
BLAST of CN184656 vs. ExPASy Swiss-Prot
Match: IF4E2_WHEAT (Eukaryotic translation initiation factor 4E-2 OS=Triticum aestivum PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 2.162e-28 Identity = 59/103 (57.28%), Postives = 76/103 (73.79%), Query Frame = -1 Query: 193 CANGGKWTVIFPIGKS-DTSWLYTLLAMIGEQFDHGDEICGAVVNVRARQEKISLWTKNASNEAAQMSIGKQWKELLDYSDTIGFIFHEDAKHDNRSK-NRYT 495 CANGGKWTVI + DT WL T +A+IGEQFD EICG V +VR RQ+K+SLWTK ASNEA Q+ IGK+WKE++DY+D + + FH+D++ S+ RYT Sbjct: 106 CANGGKWTVISSRKTNLDTMWLETCMALIGEQFDESQEICGVVASVRQRQDKLSLWTKTASNEAVQVDIGKKWKEVIDYNDKMVYSFHDDSRSQKPSRGGRYT 208
BLAST of CN184656 vs. ExPASy Swiss-Prot
Match: IF4E2_MAIZE (Eukaryotic translation initiation factor 4E-2 OS=Zea mays PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 2.823e-28 Identity = 58/105 (55.24%), Postives = 80/105 (76.19%), Query Frame = -1 Query: 193 CANGGKWTVIFPIGKS---DTSWLYTLLAMIGEQFDHGDEICGAVVNVRARQEKISLWTKNASNEAAQMSIGKQWKELLDYSDTIGFIFHEDAKHDNRSK-NRYT 495 CANGGKWTV P + +T WL TL+A+IGEQFD ++ICG V +VRAR +K++LWT+ ASNEA Q++IGK+WK+++DY+D I + FH+D+K D S+ RYT Sbjct: 113 CANGGKWTV--PCNRKATFETMWLETLMALIGEQFDETEDICGIVASVRARGDKLALWTRTASNEAVQVNIGKKWKDVIDYNDKITYTFHDDSKRDKPSRGGRYT 215
BLAST of CN184656 vs. ExPASy Swiss-Prot
Match: IF4E2_ORYSJ (Eukaryotic translation initiation factor 4E-2 OS=Oryza sativa subsp. japonica GN=Os10g0467600 PE=2 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 4.077e-27 Identity = 55/100 (55.00%), Postives = 75/100 (75.00%), Query Frame = -1 Query: 205 CANGGKWTVIFPIGKSDT---SWLYTLLAMIGEQFDHGDEICGAVVNVRARQEKISLWTKNASNEAAQMSIGKQWKELLDYSDTIGFIFHEDAKHDNRSK 495 CANGGKWTV P + T WL TL+A+IGEQFD +EICG V +VR R +K++LWT+ ASNEA Q++IGK+WKE++DY+D + + FH+DAK + S+ Sbjct: 103 CANGGKWTV--PCSRKTTLENMWLETLMALIGEQFDESEEICGVVASVRQRGDKLALWTRTASNEAVQVNIGKKWKEIVDYNDKMVYSFHDDAKREKPSR 200
BLAST of CN184656 vs. ExPASy Swiss-Prot
Match: IF4E2_ARATH (Eukaryotic translation initiation factor 4E-2 OS=Arabidopsis thaliana GN=EIF4E2 PE=1 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 5.510e-24 Identity = 52/96 (54.17%), Postives = 68/96 (70.83%), Query Frame = -1 Query: 223 CANGGKWTVIFPIGKS---DTSWLYTLLAMIGEQFDHGDEICGAVVNVR--ARQEKISLWTKNASNEAAQMSIGKQWKELLDYSDTIGFIFHEDAK 495 CANGGKWT + + D WL TL+A+IGEQFD DEICG V +VR ++Q+K+SLWT+ SNEA M IGK+WKE+LD +D I F H+D++ Sbjct: 97 CANGGKWTWVVTANRKEALDKGWLETLMALIGEQFDEADEICGVVASVRPQSKQDKLSLWTRTKSNEAVLMGIGKKWKEILDVTDKITFNNHDDSR 192 The following BLAST results are available for this feature:
BLAST of CN184656 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184656 ID=CN184656; Name=CN184656; organism=Citrus sinensis; type=EST; length=495bpback to top |