CN184655
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN184655 vs. ExPASy Swiss-Prot
Match: IF4E1_ORYSJ (Eukaryotic translation initiation factor 4E-1 OS=Oryza sativa subsp. japonica GN=Os01g0970400 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 3.350e-39 Identity = 56/80 (70.00%), Postives = 63/80 (78.75%), Query Frame = 2 Query: 104 IVGDDEPSKNSTAVMQQPHPLEHSWTFWFDNPFAKSKQATWGSSMRSIYTFSSVEEFWSLYNNIHHPSKLAVGADFYCFQ 343 I DD A PHPLEH+WTFWFDNP KSKQATWGSS+R I+TFS+VE+FWSLYNNIHHPSKL VGADF+CF+ Sbjct: 34 IADDDSGHAPPQANPAAPHPLEHAWTFWFDNPQGKSKQATWGSSIRPIHTFSTVEDFWSLYNNIHHPSKLVVGADFHCFK 113 HSP 2 Score: 54.299 bits (129), Expect = 3.350e-39 Identity = 21/24 (87.50%), Postives = 22/24 (91.67%), Query Frame = 3 Query: 330 FIVFKNKIEPKWEDPVCANGGKWT 401 F FKNKIEPKWEDP+CANGGKWT Sbjct: 109 FHCFKNKIEPKWEDPICANGGKWT 132
BLAST of CN184655 vs. ExPASy Swiss-Prot
Match: IF4E1_ARATH (Eukaryotic translation initiation factor 4E-1 OS=Arabidopsis thaliana GN=EIF4E1 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.043e-37 Identity = 52/78 (66.67%), Postives = 64/78 (82.05%), Query Frame = 2 Query: 110 GDDEPSKNSTAVMQQPHPLEHSWTFWFDNPFAKSKQATWGSSMRSIYTFSSVEEFWSLYNNIHHPSKLAVGADFYCFQ 343 GD ++S + + + HPLEHSWTFWFDNP KSKQ +WGSS+R ++TFS+VEEFWSLYNN+ HPSKLA GADFYCF+ Sbjct: 44 GDGNVDESSKSGVPESHPLEHSWTFWFDNPAVKSKQTSWGSSLRPVFTFSTVEEFWSLYNNMKHPSKLAHGADFYCFK 121 HSP 2 Score: 52.373 bits (124), Expect = 1.043e-37 Identity = 20/27 (74.07%), Postives = 23/27 (85.19%), Query Frame = 3 Query: 330 FIVFKNKIEPKWEDPVCANGGKWTVIF 410 F FK+ IEPKWEDP+CANGGKWT+ F Sbjct: 117 FYCFKHIIEPKWEDPICANGGKWTMTF 143
BLAST of CN184655 vs. ExPASy Swiss-Prot
Match: IF4E1_MAIZE (Eukaryotic translation initiation factor 4E-1 OS=Zea mays PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.918e-37 Identity = 50/62 (80.65%), Postives = 57/62 (91.94%), Query Frame = 2 Query: 158 HPLEHSWTFWFDNPFAKSKQATWGSSMRSIYTFSSVEEFWSLYNNIHHPSKLAVGADFYCFQ 343 HPLEHSWTFWFDNP +KSKQA WGSS+R I+TFS+VEEFW LYNNI+HPSKL VGADF+CF+ Sbjct: 43 HPLEHSWTFWFDNPQSKSKQAAWGSSIRPIHTFSTVEEFWGLYNNINHPSKLIVGADFHCFK 104 HSP 2 Score: 55.4546 bits (132), Expect = 3.918e-37 Identity = 21/25 (84.00%), Postives = 23/25 (92.00%), Query Frame = 3 Query: 330 FIVFKNKIEPKWEDPVCANGGKWTV 404 F FKNKIEPKWEDP+CANGGKWT+ Sbjct: 100 FHCFKNKIEPKWEDPICANGGKWTI 124
BLAST of CN184655 vs. ExPASy Swiss-Prot
Match: IF4E1_WHEAT (Eukaryotic translation initiation factor 4E-1 OS=Triticum aestivum PE=1 SV=3) HSP 1 Score: 109.768 bits (273), Expect = 2.232e-34 Identity = 47/80 (58.75%), Postives = 60/80 (75.00%), Query Frame = 2 Query: 104 IVGDDEPSKNSTAVMQQPHPLEHSWTFWFDNPFAKSKQATWGSSMRSIYTFSSVEEFWSLYNNIHHPSKLAVGADFYCFQ 343 I D + S + A HPLE++WTFWFDNP KS+Q WGS++ I+TFS+VE+FW LYNNIH+PSKL VGADF+CF+ Sbjct: 22 IADDGDGSSAAAAGRITAHPLENAWTFWFDNPQGKSRQVAWGSTIHPIHTFSTVEDFWGLYNNIHNPSKLNVGADFHCFK 101 HSP 2 Score: 55.4546 bits (132), Expect = 2.232e-34 Identity = 21/25 (84.00%), Postives = 23/25 (92.00%), Query Frame = 3 Query: 330 FIVFKNKIEPKWEDPVCANGGKWTV 404 F FKNKIEPKWEDP+CANGGKWT+ Sbjct: 97 FHCFKNKIEPKWEDPICANGGKWTI 121
BLAST of CN184655 vs. ExPASy Swiss-Prot
Match: IF4E4_ARATH (Putative eukaryotic translation initiation factor 4E-4 OS=Arabidopsis thaliana GN=At1g29550 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 9.786e-27 Identity = 54/110 (49.09%), Postives = 70/110 (63.64%), Query Frame = 2 Query: 44 DQTNTKNPNPSXXXXXXXXXIVGDDEP---------SKNSTAVMQQPHPLEHSWTFWFDNPFAKSKQATWGSSMRSIYTFSSVEEFWSLYNNIHHPSKLAVGADFYCFQE 346 D T +P+P I GD++ SK ST V+Q+ H ++SWTFWFDNP +KS Q WGSS+RS+YTF ++EEFWSLYNNIH P+K GAD YCF++ Sbjct: 18 DPNTTTSPSPKEKHVSAIKAISGDEKAPSKEKKNYASKKSTTVIQKSHCFQNSWTFWFDNPSSKSNQVIWGSSLRSLYTFGTIEEFWSLYNNIHPPTKWVSGADLYCFKD 127
BLAST of CN184655 vs. ExPASy Swiss-Prot
Match: IF4E5_ARATH (Eukaryotic translation initiation factor 4E-5 OS=Arabidopsis thaliana GN=At1g29590 PE=2 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 2.847e-26 Identity = 53/110 (48.18%), Postives = 71/110 (64.55%), Query Frame = 2 Query: 44 DQTNTKNPNPSXXXXXXXXXIVGDDEP---------SKNSTAVMQQPHPLEHSWTFWFDNPFAKSKQATWGSSMRSIYTFSSVEEFWSLYNNIHHPSKLAVGADFYCFQE 346 D T +P+P I GD++ SK ST V+Q+ H ++SWTFWFDNP +KS Q WGSS+RS+YTF+++EEFWSLYNNIH P+K G+D YCF++ Sbjct: 18 DPNTTTSPSPIEKHVSAIKAISGDEKAPSKEKKNYASKKSTTVIQKSHCFQNSWTFWFDNPSSKSNQVIWGSSLRSLYTFATIEEFWSLYNNIHPPTKWVSGSDLYCFKD 127
BLAST of CN184655 vs. ExPASy Swiss-Prot
Match: IF4E2_MAIZE (Eukaryotic translation initiation factor 4E-2 OS=Zea mays PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.416e-23 Identity = 32/74 (43.24%), Postives = 44/74 (59.46%), Query Frame = 2 Query: 122 PSKNSTAVMQQPHPLEHSWTFWFDNPFAKSKQATWGSSMRSIYTFSSVEEFWSLYNNIHHPSKLAVGADFYCFQ 343 P + + PH L WTFW+D A WG+S++ YTF +VEEFWS+Y+ I PSKL+ ADF+ F+ Sbjct: 28 PEAGAATEAKGPHKLHRQWTFWYDIQTKTKSGAAWGTSLKKAYTFDTVEEFWSMYDQIFRPSKLSGNADFHLFK 101 HSP 2 Score: 48.521 bits (114), Expect = 6.416e-23 Identity = 19/25 (76.00%), Postives = 21/25 (84.00%), Query Frame = 3 Query: 330 FIVFKNKIEPKWEDPVCANGGKWTV 404 F +FK +EPKWEDP CANGGKWTV Sbjct: 97 FHLFKAGVEPKWEDPECANGGKWTV 121
BLAST of CN184655 vs. ExPASy Swiss-Prot
Match: IF4E2_ORYSJ (Eukaryotic translation initiation factor 4E-2 OS=Oryza sativa subsp. japonica GN=Os10g0467600 PE=2 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 1.087e-22 Identity = 32/68 (47.06%), Postives = 41/68 (60.29%), Query Frame = 2 Query: 140 AVMQQPHPLEHSWTFWFDNPFAKSKQATWGSSMRSIYTFSSVEEFWSLYNNIHHPSKLAVGADFYCFQ 343 A + PH L W FW+D A WG+S+R YTF +VEEFW LY+ I PSK+ V ADF+ F+ Sbjct: 24 AAAKAPHKLHRQWAFWYDIQSKPKPGAAWGTSLRKAYTFDTVEEFWGLYDQIFRPSKVTVNADFHLFK 91 HSP 2 Score: 48.521 bits (114), Expect = 1.087e-22 Identity = 19/25 (76.00%), Postives = 21/25 (84.00%), Query Frame = 3 Query: 330 FIVFKNKIEPKWEDPVCANGGKWTV 404 F +FK +EPKWEDP CANGGKWTV Sbjct: 87 FHLFKAGVEPKWEDPECANGGKWTV 111
BLAST of CN184655 vs. ExPASy Swiss-Prot
Match: IF4E2_WHEAT (Eukaryotic translation initiation factor 4E-2 OS=Triticum aestivum PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.394e-22 Identity = 31/63 (49.21%), Postives = 40/63 (63.49%), Query Frame = 2 Query: 155 PHPLEHSWTFWFDNPFAKSKQATWGSSMRSIYTFSSVEEFWSLYNNIHHPSKLAVGADFYCFQ 343 PH L+ WTFW+D A WG+S++ YTF +VEEFW LY+ I PSKL ADF+ F+ Sbjct: 32 PHKLQRQWTFWYDIQTKPKPGAAWGTSLKKGYTFDTVEEFWCLYDQIFRPSKLVGSADFHLFK 94 HSP 2 Score: 50.0618 bits (118), Expect = 2.394e-22 Identity = 20/26 (76.92%), Postives = 22/26 (84.62%), Query Frame = 3 Query: 330 FIVFKNKIEPKWEDPVCANGGKWTVI 407 F +FK +EPKWEDP CANGGKWTVI Sbjct: 90 FHLFKAGVEPKWEDPECANGGKWTVI 115
BLAST of CN184655 vs. ExPASy Swiss-Prot
Match: IF4E2_ARATH (Eukaryotic translation initiation factor 4E-2 OS=Arabidopsis thaliana GN=EIF4E2 PE=1 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 4.331e-21 Identity = 32/70 (45.71%), Postives = 43/70 (61.43%), Query Frame = 2 Query: 134 STAVMQQPHPLEHSWTFWFDNPFAKSKQATWGSSMRSIYTFSSVEEFWSLYNNIHHPSKLAVGADFYCFQ 343 +T +QPH LE W+FWFDN K A WG+S+R YTF +VE+FW L+ I SKL A+ + F+ Sbjct: 18 ATEAEKQPHKLERKWSFWFDNQ--SKKGAAWGASLRKAYTFDTVEDFWGLHETIFQTSKLTANAEIHLFK 85 HSP 2 Score: 45.8246 bits (107), Expect = 4.331e-21 Identity = 17/22 (77.27%), Postives = 19/22 (86.36%), Query Frame = 3 Query: 336 VFKNKIEPKWEDPVCANGGKWT 401 +FK +EPKWEDP CANGGKWT Sbjct: 83 LFKAGVEPKWEDPECANGGKWT 104 The following BLAST results are available for this feature:
BLAST of CN184655 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184655 ID=CN184655; Name=CN184655; organism=Citrus sinensis; type=EST; length=411bpback to top |