CN184654

Overview
NameCN184654
Unique NameCN184654
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length522
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184654 vs. ExPASy Swiss-Prot
Match: FRS5_ARATH (Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=FRS5 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 2.900e-29
Identity = 60/109 (55.05%), Postives = 81/109 (74.31%), Query Frame = 1
Query:  169 DGEPYLGMEFESEEAAKVFYDAYATHMGFIMRVDAFRRSMRDGKVVWRRLVCNKEGFRKLRPRRSENR---KPRAVTREGCKAMIVVKKEKTGKWVVTRFVKEHNHPLV 486
            D EPY G+EFESEEAAK FY++YA  +GF  RV + RRS RDG ++ R+ VC KEGFR +  +R+++R   +PR +TR GCKA + VK + +GKW+V+ FVK+HNH LV
Sbjct:   70 DLEPYDGLEFESEEAAKAFYNSYARRIGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTITRVGCKASLSVKMQDSGKWLVSGFVKDHNHELV 178          
BLAST of CN184654 vs. ExPASy Swiss-Prot
Match: FRS7_ARATH (Protein FAR1-RELATED SEQUENCE 7 OS=Arabidopsis thaliana GN=FRS7 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.303e-18
Identity = 48/113 (42.48%), Postives = 66/113 (58.41%), Query Frame = 1
Query:  145 MAVTKGSSDGEPYLGMEFESEEAAKVFYDAYATHMGFIMRVDAFRRSMRDGKVVWRRLVCNKEGFRKLRPRRSENRKPRAVTREGCKAMIVVKKEKTGKWVVTRFVKEHNHPL 483
            +A  +G S  EPY+G+EF++ E A+ +Y++YAT  GF +R     RS  DG V  RR VC+KEGF             +  +R GC A I V++  TGKWV+ +  KEHNH L
Sbjct:   17 IAENEGDSGLEPYVGLEFDTAEEARDYYNSYATRTGFKVRTGQLYRSRTDGTVSSRRFVCSKEGF-------------QLNSRTGCPAFIRVQRRDTGKWVLDQIQKEHNHDL 116          

HSP 2 Score: 80.8777 bits (198), Expect = 4.066e-15
Identity = 42/103 (40.78%), Postives = 57/103 (55.34%), Query Frame = 1
Query:  175 EPYLGMEFESEEAAKVFYDAYATHMGFIMRVDAFRRSMRDGKVVWRRLVCNKEGFRKLRPRRSENRKPRAVTREGCKAMIVVKKEKTGKWVVTRFVKEHNHPL 483
            EPY G+EF S   A  FY AYA  +GF +R+    RS  DG +  RR VC+KEGF+               +R GC A + +K++ +G W+V R  K+HNH L
Sbjct:  189 EPYAGLEFNSANEACQFYQAYAEVVGFRVRIGQLFRSKVDGSITSRRFVCSKEGFQH-------------PSRMGCGAYMRIKRQDSGGWIVDRLNKDHNHDL 278          
BLAST of CN184654 vs. ExPASy Swiss-Prot
Match: FRS12_ARATH (Protein FAR1-RELATED SEQUENCE 12 OS=Arabidopsis thaliana GN=FRS12 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.303e-18
Identity = 48/109 (44.04%), Postives = 63/109 (57.80%), Query Frame = 1
Query:  157 KGSSDGEPYLGMEFESEEAAKVFYDAYATHMGFIMRVDAFRRSMRDGKVVWRRLVCNKEGFRKLRPRRSENRKPRAVTREGCKAMIVVKKEKTGKWVVTRFVKEHNHPL 483
            +G S  EPY+G+EF++ E A+ FY+AYA   GF +R     RS  DG V  RR VC+KEGF             +  +R GC A I V++  TGKWV+ +  KEHNH L
Sbjct:   36 EGGSGVEPYVGLEFDTAEEAREFYNAYAARTGFKVRTGQLYRSRTDGTVSSRRFVCSKEGF-------------QLNSRTGCTAFIRVQRRDTGKWVLDQIQKEHNHEL 131          

HSP 2 Score: 80.1073 bits (196), Expect = 6.935e-15
Identity = 45/127 (35.43%), Postives = 66/127 (51.97%), Query Frame = 1
Query:  103 GQNEEMMENVNDQEMAVTKGSSDGEPYLGMEFESEEAAKVFYDAYATHMGFIMRVDAFRRSMRDGKVVWRRLVCNKEGFRKLRPRRSENRKPRAVTREGCKAMIVVKKEKTGKWVVTRFVKEHNHPL 483
            G+ E   ++   Q+     G+   EPY G+EF S   A  FY AYA  +GF +R+    RS  DG +  RR VC++EGF+               +R GC A + +K++ +G W+V R  K+HNH L
Sbjct:  189 GEGEVSDDHHQTQQAKAVTGT---EPYAGLEFGSANEACQFYQAYAEVVGFRVRIGQLFRSKVDGSITSRRFVCSREGFQH-------------PSRMGCGAYMRIKRQDSGGWIVDRLNKDHNHDL 299          
BLAST of CN184654 vs. ExPASy Swiss-Prot
Match: FRS2_ARATH (Protein FAR1-RELATED SEQUENCE 2 OS=Arabidopsis thaliana GN=FRS2 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.397e-15
Identity = 40/99 (40.40%), Postives = 63/99 (63.64%), Query Frame = 1
Query:  187 GMEFESEEAAKVFYDAYATHMGFIMRVDAFRRSMRDGKVVWRRLVCNKEGFRKLRPRRSENRKPRAVTREGCKAMIVVKKEKTGKWVVTRFVKEHNHPL 483
            GM+FES+EAA  FY  YA  +GF + + A RRS R GK +  ++ C++ G ++    ++    PR+  + GCKA + +K+++  KWV+  FVKEHNH +
Sbjct:   41 GMDFESKEAAYYFYREYARSVGFGITIKASRRSKRSGKFIDVKIACSRFGTKR---EKATAINPRSCPKTGCKAGLHMKRKEDEKWVIYNFVKEHNHEI 136          
BLAST of CN184654 vs. ExPASy Swiss-Prot
Match: FAR1_ARATH (Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana GN=FAR1 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 4.495e-14
Identity = 37/109 (33.94%), Postives = 57/109 (52.29%), Query Frame = 1
Query:  160 GSSDGEPYLGMEFESEEAAKVFYDAYATHMGFIMRVDAFRRSMRDGKVVWRRLVCNKEGFRKLRPRRSENRKPRAVTREGCKAMIVVKKEKTGKWVVTRFVKEHNHPLV 486
            G  D EP  G++F++ EAA +FY  YA  MGF   +   RRS +    +  +  C++ G          + +   V +  CKA + VK+   GKW++  FVK+HNH L+
Sbjct:   45 GDLDLEPRNGIDFDTHEAAYIFYQEYAKSMGFTTSIKNSRRSKKTKDFIDAKFACSRYGVTPESESSGSSSRRSTVKKTDCKASMHVKRRPDGKWIIHEFVKDHNHELL 153          
BLAST of CN184654 vs. ExPASy Swiss-Prot
Match: FRS1_ARATH (Protein FAR1-RELATED SEQUENCE 1 OS=Arabidopsis thaliana GN=FRS1 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.708e-13
Identity = 43/123 (34.96%), Postives = 61/123 (49.59%), Query Frame = 1
Query:  187 GMEFESEEAAKVFYDAYATHMGFIMRVDAFRRSMRDGKVVWRRLVCNKEGFRK-------------LRPRRSENRKPRAVTREGCKAMIVVKKEKTGKWVVTRFVKEHNHPLVAIPANGRRSV 516
            G EFES+E A  FY  YA  +GF   + A RRS   GK +  + VC + G +K             +   R   R  R+ ++  CKA + VK+ + G+WVV   VKEHNH +    A+  R +
Sbjct:   24 GREFESKEEAFEFYKEYANSVGFTTIIKASRRSRMTGKFIDAKFVCTRYGSKKEDIDTGLGTDGFNIPQARKRGRINRSSSKTDCKAFLHVKRRQDGRWVVRSLVKEHNHEIFTGQADSLREL 146          
BLAST of CN184654 vs. ExPASy Swiss-Prot
Match: FRS3_ARATH (Protein FAR1-RELATED SEQUENCE 3 OS=Arabidopsis thaliana GN=FRS3 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 1.107e-12
Identity = 42/122 (34.43%), Postives = 61/122 (50.00%), Query Frame = 1
Query:  124 ENVNDQEMAVTKGSSDGEPYLGMEFESEEAAKVFYDAYATHMGFIMRVDAFRRSMRDGKVVWRRLVCNKEGFRKLRPRRSENRKPRAVTREGCKAMIVVKKEKTGKWVVTRFVKEHNHPLVA 489
            +N  D  + V       EP +GMEF SE+ AK FYD Y+  +GF  ++        DG V  R  VC+           S +++ +    E C AM+ ++ +   KWVVT+FVKEH H L +
Sbjct:   31 QNNMDNSLGVQDEIGIAEPCVGMEFNSEKEAKSFYDEYSRQLGFTSKL----LPRTDGSVSVREFVCS-----------SSSKRSKRRLSESCDAMVRIELQGHEKWVVTKFVKEHTHGLAS 137          
BLAST of CN184654 vs. ExPASy Swiss-Prot
Match: FHY3_ARATH (Protein FAR-RED ELONGATED HYPOCOTYL 3 OS=Arabidopsis thaliana GN=FHY3 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.107e-12
Identity = 53/171 (30.99%), Postives = 80/171 (46.78%), Query Frame = 1
Query:   55 DLELDLYPSMDENPSTGQNEEMMENVNDQE---MAVTKGS----SDG---EPYLGMEFESEEAAKVFYDAYATHMGFIMRVDAFRRSMRDGKVVWRRLVCNKEGFRKL------RPRRSENRKP-------RAVTREGCKAMIVVKKEKTGKWVVTRFVKEHNHPLVAIPA 498
            D  LD     +E+   G+ E++   VN  +   M V  G     ++G   EP  GMEFES   A  FY  Y+  MGF   +   RRS    + +  +  C++ G ++       RPR  ++++        R   +  CKA + VK+   GKWV+  FV+EHNH L+   A
Sbjct:   19 DRGLDNVLHNEEDMDIGKIEDVSVEVNTDDSVGMGVPTGELVEYTEGMNLEPLNGMEFESHGEAYSFYQEYSRAMGFNTAIQNSRRSKTTREFIDAKFACSRYGTKREYDKSFNRPRARQSKQDPENMAGRRTCAKTDCKASMHVKRRPDGKWVIHSFVREHNHELLPAQA 189          
BLAST of CN184654 vs. ExPASy Swiss-Prot
Match: FRS4_ARATH (Protein FAR1-RELATED SEQUENCE 4 OS=Arabidopsis thaliana GN=FRS4 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.562e-11
Identity = 41/108 (37.96%), Postives = 58/108 (53.70%), Query Frame = 1
Query:  190 MEFESEEAAKVFYDAYATHMGFIMRVDAFRRSMRDGKVVWRRLVCNKEGFRKLRPRRSENRKPRAVTREGCKAMIVVKKEKTGKWVVTRFVKEHNHPLVAIPANGRRS 513
            MEFE+ E A +FY  YA  +GF     + RRS    + +  +  C + G ++   +  +   PRA  + GCKA + VK+   GKW V  FVKEHNH L+   A+  RS
Sbjct:    1 MEFETHEDAYLFYKDYAKSVGFGTAKLSSRRSRASKEFIDAKFSCIRYGSKQ---QSDDAINPRASPKIGCKASMHVKRRPDGKWYVYSFVKEHNHDLLPEQAHYFRS 105          
The following BLAST results are available for this feature:
BLAST of CN184654 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
FRS5_ARATH2.900e-2955.05Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis tha... [more]
FRS7_ARATH2.303e-1842.48Protein FAR1-RELATED SEQUENCE 7 OS=Arabidopsis tha... [more]
FRS12_ARATH2.303e-1844.04Protein FAR1-RELATED SEQUENCE 12 OS=Arabidopsis th... [more]
FRS2_ARATH1.397e-1540.40Protein FAR1-RELATED SEQUENCE 2 OS=Arabidopsis tha... [more]
FAR1_ARATH4.495e-1433.94Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis... [more]
FRS1_ARATH1.708e-1334.96Protein FAR1-RELATED SEQUENCE 1 OS=Arabidopsis tha... [more]
FRS3_ARATH1.107e-1234.43Protein FAR1-RELATED SEQUENCE 3 OS=Arabidopsis tha... [more]
FHY3_ARATH1.107e-1230.99Protein FAR-RED ELONGATED HYPOCOTYL 3 OS=Arabidops... [more]
FRS4_ARATH3.562e-1137.96Protein FAR1-RELATED SEQUENCE 4 OS=Arabidopsis tha... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_0005N13_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005N13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184654 ID=CN184654; Name=CN184654; organism=Citrus sinensis; type=EST; length=522bp
TTCTGAACCCGAAACCAAAACCTCTGTTGCTGGTGACTTTGTGTCTCAAC
ACTGGATTTAGAGTTGGATCTGTATCCATCAATGGATGAAAATCCTTCTA
CAGGCCAGAATGAGGAAATGATGGAGAATGTGAATGACCAAGAGATGGCT
GTAACTAAAGGAAGTTCGGATGGGGAACCATACTTGGGTATGGAGTTTGA
ATCTGAGGAGGCTGCTAAGGTGTTTTATGATGCATATGCCACACATATGG
GTTTCATTATGCGTGTTGATGCATTTCGTCGATCAATGCGTGATGGCAAG
GTTGTTTGGCGTCGACTTGTGTGTAATAAAGAGGGTTTTCGCAAGTTGAG
ACCAAGAAGAAGTGAGAATAGGAAACCTCGAGCAGTCACCAGAGAAGGTT
GTAAGGCAATGATAGTGGTGAAAAAGGAGAAAACTGGAAAATGGGTTGTA
ACTAGATTTGTCAAGGAGCACAACCACCCACTGGTAGCTATACCTGCCAA
TGGTCGTCGAAGTGTGCTACTA
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