CN184648
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN184648 vs. ExPASy Swiss-Prot
Match: PSB1_PETHY (Proteasome subunit beta type-1 OS=Petunia hybrida GN=PBF1 PE=2 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 7.787e-39 Identity = 80/87 (91.95%), Postives = 83/87 (95.40%), Query Frame = -2 Query: 466 ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMELRKD 726 ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEA+DLVKTCFASATERDIYTGD+LEIV+LN GI RE MELRKD Sbjct: 137 ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAIDLVKTCFASATERDIYTGDRLEIVILNASGIRREEMELRKD 223
BLAST of CN184648 vs. ExPASy Swiss-Prot
Match: PSB1_ARATH (Proteasome subunit beta type-1 OS=Arabidopsis thaliana GN=PBF1 PE=1 SV=2) HSP 1 Score: 145.206 bits (365), Expect = 3.386e-34 Identity = 73/87 (83.91%), Postives = 78/87 (89.66%), Query Frame = -2 Query: 466 ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMELRKD 726 ERVGY +QGSGSTLIMPFLDNQLKSPSPLLLP QD+ TPLSEAEAVDLVKT FASATERDIYTGDKLEI++L DGI E M+LRKD Sbjct: 137 ERVGYGAQGSGSTLIMPFLDNQLKSPSPLLLPKQDSNTPLSEAEAVDLVKTVFASATERDIYTGDKLEIMILKADGIKTELMDLRKD 223
BLAST of CN184648 vs. ExPASy Swiss-Prot
Match: PSB1_ORYSJ (Proteasome subunit beta type-1 OS=Oryza sativa subsp. japonica GN=PBF1 PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 7.542e-34 Identity = 72/87 (82.76%), Postives = 78/87 (89.66%), Query Frame = -2 Query: 466 ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMELRKD 726 ER GYS+QG+GS LIMP LDNQLKSPSPLLLPA+DAVTPLSE EAVDLVK FASATERDIYTGDKLEIVV+NK G REY++LRKD Sbjct: 135 ERTGYSAQGTGSALIMPVLDNQLKSPSPLLLPARDAVTPLSETEAVDLVKDVFASATERDIYTGDKLEIVVINKAGTKREYIDLRKD 221
BLAST of CN184648 vs. ExPASy Swiss-Prot
Match: PSB1_DICDI (Proteasome subunit beta type-1 OS=Dictyostelium discoideum GN=psmB1 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.252e-12 Identity = 41/87 (47.13%), Postives = 55/87 (63.22%), Query Frame = -2 Query: 466 ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMELRKD 726 ERV YSSQGSG+ L++P LDNQ+ + ++ V S + V VK SA ERDIYTGD +IVV++K+G+H E EL+ D Sbjct: 153 ERVKYSSQGSGNQLVIPLLDNQVAKFNQQIVEGNKDV---SCEQVVSFVKDSITSAGERDIYTGDFADIVVVDKNGVHWEKFELKLD 236
BLAST of CN184648 vs. ExPASy Swiss-Prot
Match: PSB1B_CARAU (Proteasome subunit beta type-1-B OS=Carassius auratus GN=psmb1-B PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.213e-12 Identity = 38/87 (43.68%), Postives = 53/87 (60.92%), Query Frame = -2 Query: 466 ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMELRKD 726 +R Y + GS S ++ P LDNQ+ + + PLS+ +AV LVK F SA ERD+YTGD L+I ++ K+GI E + LRKD Sbjct: 155 QRDTYKAGGSASAMLQPLLDNQIGFKNMENVEQ----VPLSQEKAVQLVKDVFISAAERDVYTGDALKICIITKEGIREEIVPLRKD 237
BLAST of CN184648 vs. ExPASy Swiss-Prot
Match: PSB1A_CARAU (Proteasome subunit beta type-1-A OS=Carassius auratus GN=psmb1-A PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.213e-12 Identity = 38/87 (43.68%), Postives = 53/87 (60.92%), Query Frame = -2 Query: 466 ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMELRKD 726 +R Y + GS S ++ P LDNQ+ + + PLS+ +AV LVK F SA ERD+YTGD L+I ++ K+GI E + LRKD Sbjct: 156 QRDTYKAGGSASAMLQPLLDNQIGFKNMENVEQ----VPLSQEKAVQLVKDVFISAAERDVYTGDALKICIITKEGIREEIVPLRKD 238 The following BLAST results are available for this feature:
BLAST of CN184648 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN184648 ID=CN184648; Name=CN184648; organism=Citrus sinensis; type=EST; length=727bpback to top |