CN184629

Overview
NameCN184629
Unique NameCN184629
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length650
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184629 vs. ExPASy Swiss-Prot
Match: NIT2_SCHPO (Probable hydrolase nit2 OS=Schizosaccharomyces pombe GN=nit2 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.758e-23
Identity = 51/88 (57.95%), Postives = 67/88 (76.14%), Query Frame = -1
Query:  390 AFTKVTGQAHGEILLRARAIETQCYVIAAAQAGKHNDKRESYGDSLIIDPWGTVIGRLPDRLS-TGIAVADIDFSLIDSVRAKMPIAK 650
            AFT+ TG AH E+LLRARA+++QCYVIA AQ GKHN+KR SYG S+I+DPWGTVI +  D  S  G+  AD+D +L+D VR  +P+ +
Sbjct:  181 AFTEKTGAAHWEVLLRARALDSQCYVIAPAQGGKHNEKRASYGHSMIVDPWGTVIAQYSDISSPNGLIFADLDLNLVDHVRTYIPLLR 268          
BLAST of CN184629 vs. ExPASy Swiss-Prot
Match: NIT1_BOVIN (Nitrilase homolog 1 OS=Bos taurus GN=NIT1 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.758e-23
Identity = 48/90 (53.33%), Postives = 68/90 (75.56%), Query Frame = -1
Query:  381 AFTKVTGQAHGEILLRARAIETQCYVIAAAQAGKHNDKRESYGDSLIIDPWGTVIGRLPDRLSTGIAVADIDFSLIDSVRAKMPIAKHRK 650
            AF  VTG AH E+LLRARAIETQCYV+AAAQ G+H++KR SYG S+++DPWGTV+ R  +    G+ +A ID + +  +R ++P+ +HR+
Sbjct:  229 AFGSVTGPAHWEVLLRARAIETQCYVVAAAQCGRHHEKRASYGHSMVVDPWGTVVARCSE--GPGLCLARIDLNYLQQLRKQLPVFQHRR 316          
BLAST of CN184629 vs. ExPASy Swiss-Prot
Match: NIT1_HUMAN (Nitrilase homolog 1 OS=Homo sapiens GN=NIT1 PE=1 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 1.428e-22
Identity = 47/90 (52.22%), Postives = 67/90 (74.44%), Query Frame = -1
Query:  381 AFTKVTGQAHGEILLRARAIETQCYVIAAAQAGKHNDKRESYGDSLIIDPWGTVIGRLPDRLSTGIAVADIDFSLIDSVRAKMPIAKHRK 650
            AF  +TG AH E+LLRARAIETQCYV+AAAQ G+H++KR SYG S+++DPWGTV+ R  +    G+ +A ID + +  +R  +P+ +HR+
Sbjct:  228 AFGSITGPAHWEVLLRARAIETQCYVVAAAQCGRHHEKRASYGHSMVVDPWGTVVARCSE--GPGLCLARIDLNYLRQLRRHLPVFQHRR 315          
BLAST of CN184629 vs. ExPASy Swiss-Prot
Match: NFT1_CAEEL (Nitrilase and fragile histidine triad fusion protein NitFhit OS=Caenorhabditis elegans GN=nft-1 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.436e-22
Identity = 49/91 (53.85%), Postives = 65/91 (71.43%), Query Frame = -1
Query:  378 AFTKVTGQAHGEILLRARAIETQCYVIAAAQAGKHNDKRESYGDSLIIDPWGTVIGRLPDRLSTGIAVADIDFSLIDSVRAKMPIAKHRKS 650
            AFT  TG AH E LLRARAIE QCYV+AAAQ G HN KR+SYG S+++DPWG V+ +  +R+   +  A+ID S +D++R   P+  HR+S
Sbjct:  194 AFTLNTGLAHWETLLRARAIENQCYVVAAAQTGAHNPKRQSYGHSMVVDPWGAVVAQCSERVD--MCFAEIDLSYVDTLREMQPVFSHRRS 282          
BLAST of CN184629 vs. ExPASy Swiss-Prot
Match: NIT1_MOUSE (Nitrilase homolog 1 OS=Mus musculus GN=Nit1 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 9.256e-22
Identity = 47/90 (52.22%), Postives = 65/90 (72.22%), Query Frame = -1
Query:  381 AFTKVTGQAHGEILLRARAIETQCYVIAAAQAGKHNDKRESYGDSLIIDPWGTVIGRLPDRLSTGIAVADIDFSLIDSVRAKMPIAKHRK 650
            AF  VTG AH E+LLRARAIE+QCYVIAAAQ G+H++ R SYG S+++DPWGTV+ R  +    G+ +A ID   +  +R  +P+ +HR+
Sbjct:  224 AFGSVTGPAHWEVLLRARAIESQCYVIAAAQCGRHHETRASYGHSMVVDPWGTVVARCSE--GPGLCLARIDLHFLQQMRQHLPVFQHRR 311          
BLAST of CN184629 vs. ExPASy Swiss-Prot
Match: NIT1_RAT (Nitrilase homolog 1 OS=Rattus norvegicus GN=Nit1 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.594e-21
Identity = 46/90 (51.11%), Postives = 64/90 (71.11%), Query Frame = -1
Query:  381 AFTKVTGQAHGEILLRARAIETQCYVIAAAQAGKHNDKRESYGDSLIIDPWGTVIGRLPDRLSTGIAVADIDFSLIDSVRAKMPIAKHRK 650
            AF  VTG AH E+LLRARAIE+QCYVIAAAQ G+H++ R SYG S+++DPWGTV+    +    G+ +A ID   +  +R  +P+ +HR+
Sbjct:  193 AFGSVTGPAHWEVLLRARAIESQCYVIAAAQCGRHHETRASYGHSMVVDPWGTVVASCSE--GPGLCLARIDLHFLQQMRQHLPVFQHRR 280          
BLAST of CN184629 vs. ExPASy Swiss-Prot
Match: NIT1_DICDI (Nitrilase homolog 1 OS=Dictyostelium discoideum GN=nit1-1 PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.023e-20
Identity = 51/90 (56.67%), Postives = 62/90 (68.89%), Query Frame = -1
Query:  381 AFTKVTGQAHGEILLRARAIETQCYVIAAAQAGKHNDKRESYGDSLIIDPWGTVIGRLPDRLSTGIAVADIDFSLIDSVRAKMPIAKHRK 650
            AF K TG+AH + LL+ARAIE Q YVIAAAQ G H+ KR SYG S+IIDPWG V+  LPD L+  IA  DID   I + R  +P+  H+K
Sbjct:  197 AFMKSTGEAHWKPLLQARAIENQTYVIAAAQTGDHHSKRSSYGHSMIIDPWGKVLHDLPDNLN-DIAFVDIDLDYISTCRENIPVFNHKK 285          
BLAST of CN184629 vs. ExPASy Swiss-Prot
Match: NFT1_DROME (Nitrilase and fragile histidine triad fusion protein NitFhit OS=Drosophila melanogaster GN=NitFhit PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.280e-20
Identity = 47/91 (51.65%), Postives = 65/91 (71.43%), Query Frame = -1
Query:  378 AFTKVTGQAHGEILLRARAIETQCYVIAAAQAGKHNDKRESYGDSLIIDPWGTVIGRLPDRLSTGIAVADIDFSLIDSVRAKMPIAKHRKS 650
            AFT  TG+AH EILLRARAIETQC+V+AAAQ G HN KR+S+G S+I+ PWG V+    ++    I  A++D S++ S+   MP  +HR++
Sbjct:  208 AFTYATGKAHWEILLRARAIETQCFVVAAAQIGWHNQKRQSWGHSMIVSPWGNVLADCSEQ-ELDIGTAEVDLSVLQSLYQTMPCFEHRRN 297          
BLAST of CN184629 vs. ExPASy Swiss-Prot
Match: Y601_SYNY3 (UPF0012 hydrolase sll0601 OS=Synechocystis sp. (strain PCC 6803) GN=sll0601 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.608e-16
Identity = 40/89 (44.94%), Postives = 61/89 (68.54%), Query Frame = -1
Query:  384 AFTKVTGQAHGEILLRARAIETQCYVIAAAQAGKHNDKRESYGDSLIIDPWGTVIGRLPDRLSTGIAVADIDFSLIDSVRAKMPIAKHR 650
            AFT  TG+ H ++LL+ARAIE  CYVIA AQ G H ++R ++G ++IIDPWG ++    ++   G+A+A+I+   +  VR +MP  +HR
Sbjct:  183 AFTAYTGKDHWQVLLQARAIENTCYVIAPAQTGCHYERRHTHGHAMIIDPWGVILADAGEK--PGLAIAEINPDRLKQVRQQMPSLQHR 269          
BLAST of CN184629 vs. ExPASy Swiss-Prot
Match: NIT2_YEAST (Probable hydrolase NIT2 OS=Saccharomyces cerevisiae GN=NIT2 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.425e-15
Identity = 42/109 (38.53%), Postives = 61/109 (55.96%), Query Frame = -1
Query:  381 AFTKVTGQAHGEILLRARAIETQCYVIAAAQAGKH------------------NDKRESYGDSLIIDPWGTVIGRL-PDRLSTGIAVADIDFSLIDSVRAKMPIAKHRK 650
            AFT  TG+AH E+L RARA++TQCYV+   Q G H                  + +RES+G S++IDPWG +I    P  +   + +AD+D  L+  +R KMP+   R+
Sbjct:  194 AFTIKTGEAHWELLGRARAVDTQCYVLMPGQVGMHDLSDPEWEKQSHMSALEKSSRRESWGHSMVIDPWGKIIAHADPSTVGPQLILADLDRELLQEIRNKMPLWNQRR 302          
The following BLAST results are available for this feature:
BLAST of CN184629 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
NIT2_SCHPO3.758e-2357.95Probable hydrolase nit2 OS=Schizosaccharomyces pom... [more]
NIT1_BOVIN3.758e-2353.33Nitrilase homolog 1 OS=Bos taurus GN=NIT1 PE=2 SV=... [more]
NIT1_HUMAN1.428e-2252.22Nitrilase homolog 1 OS=Homo sapiens GN=NIT1 PE=1 S... [more]
NFT1_CAEEL2.436e-2253.85Nitrilase and fragile histidine triad fusion prote... [more]
NIT1_MOUSE9.256e-2252.22Nitrilase homolog 1 OS=Mus musculus GN=Nit1 PE=2 S... [more]
NIT1_RAT4.594e-2151.11Nitrilase homolog 1 OS=Rattus norvegicus GN=Nit1 P... [more]
NIT1_DICDI1.023e-2056.67Nitrilase homolog 1 OS=Dictyostelium discoideum GN... [more]
NFT1_DROME2.280e-2051.65Nitrilase and fragile histidine triad fusion prote... [more]
Y601_SYNY32.608e-1644.94UPF0012 hydrolase sll0601 OS=Synechocystis sp. (st... [more]
NIT2_YEAST6.425e-1538.53Probable hydrolase NIT2 OS=Saccharomyces cerevisia... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_0005M23_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005M23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184629 ID=CN184629; Name=CN184629; organism=Citrus sinensis; type=EST; length=650bp
TCCGAATGAATTATGATCACAAATTGTTTGTTTTTTTCAAACTAGTGTAT
CAAATAAACTCCCATATTCATGTATCTTGCACATTGTGGTTGGTGAAGTT
AAAGTAATTAATATCAATTTACAGGGAGCTGGAATATAACAACATTGTGA
ATATAATAAGTACATCCAAATTTCCTATACTGCGTCAAATTTTCAACTTT
AGGAACTTATTATACATAAAAGAATTCTTCCCCTTGAGGCAAAAGAGAAG
GGGTAGCATTGCTCCTTTCAACTACATGACAAATTTGGCATGGCTTTGAC
ATACCGTCTGGTCTGGGCAACAAGGGGATTGAAATCATCTTTTGAAATCA
CAGAGAAGCAGACTTCCAGAAATCAATTGATTTCCGATGCTTAGCAATTG
GCATCTTTGCTCTCACTGAATCTATCAATGAGAAATCAATATCAGCAACA
GCAATACCTGTTGATAGTCGATCAGGTAGTCGACCAATAACTGTTCCCCA
TGGGTCAATTATCAATGAGTCACCATAACTCTCCCTCTTATCGTTATGCT
TTCCAGCTTGAGCAGCAGCTATCACATAACATTGAGTCTCAATAGCACGT
GCACGAAGAAGAATCTCCCCATGTGCCTGACCAGTTACTTTTGTGAAAGC
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