CN184613

Overview
NameCN184613
Unique NameCN184613
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length515
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2113 contig Csv1_Contig2113:133..647. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN184613 vs. ExPASy Swiss-Prot
Match: UFOG1_MANES (Anthocyanidin 3-O-glucosyltransferase 1 OS=Manihot esculenta GN=GT1 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 6.814e-28
Identity = 79/170 (46.47%), Postives = 105/170 (61.76%), Query Frame = 3
Query:   21 GHLVSTVEIAKILVDRHERICITVLIIKLPF-DNKVAAYTESLAACNLPSRIKFIFLPDDNQSPTPGKVPYSSL-ETKKTHVKEAVAKLT---GSPDSPTLAGFVLDMFCMCMVDVADELRVPSYVFFTSSAASLGSFLNGQALYDQNKLT-TELIDSGADLQVPTLVNS 512
            GHLVS VE AK+L+ R   + ITVLI       +KV  Y +S  A +  +R++FI+LP D      G   +SSL E +K HVKE+V K+T    S +SP L GF++DMFC  M+DVA+E  VPSY+F+TS AA L   L+ Q ++D+     TE   S  +LQVP LVNS
Sbjct:    2 GHLVSAVETAKLLLSRCHSLSITVLIFNNSVVTSKVHNYVDSQIASS-SNRLRFIYLPRDET----GISSFSSLIEKQKPHVKESVMKITEFGSSVESPRLVGFIVDMFCTAMIDVANEFGVPSYIFYTSGAAFLNFMLHVQKIHDEENFNPTEFNASDGELQVPGLVNS 166          
BLAST of CN184613 vs. ExPASy Swiss-Prot
Match: UFOG6_MANES (Anthocyanidin 3-O-glucosyltransferase 6 (Fragment) OS=Manihot esculenta GN=GT6 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 3.389e-19
Identity = 52/94 (55.32%), Postives = 66/94 (70.21%), Query Frame = 3
Query:  237 LETKKTHVKEAVAKLTGSPDSPTLAGFVLDMFCMCMVDVADELRVPSYVFFTSSAASLGSFLNGQALYD-QNKLTTELIDSGADLQVPTLVNSI 515
            ++ +K HVKEAV+KLT   DS +LAGFVLDMFC  M+DVA EL VP Y+FFTS AA LG     Q ++D Q+   T+  DS A+L VP+L NS+
Sbjct:    9 IDKQKAHVKEAVSKLTARSDS-SLAGFVLDMFCTSMIDVAKELGVPYYIFFTSGAAFLGFLFYVQLIHDEQDADLTQFKDSDAELSVPSLANSL 101          
The following BLAST results are available for this feature:
BLAST of CN184613 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
UFOG1_MANES6.814e-2846.47Anthocyanidin 3-O-glucosyltransferase 1 OS=Manihot... [more]
UFOG6_MANES3.389e-1955.32Anthocyanidin 3-O-glucosyltransferase 6 (Fragment)... [more]
back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_0005M14_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005M14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184613 ID=CN184613; Name=CN184613; organism=Citrus sinensis; type=EST; length=515bp
TCATTCCATCGCCAGGCGCCGGCCACCTTGTATCGACGGTGGAGATTGCA
AAGATCCTCGTTGATCGCCACGAACGTATCTGCATCACAGTCCTGATAAT
CAAGCTTCCATTTGACAACAAAGTCGCCGCCTACACAGAATCACTCGCCG
CCTGTAATTTACCATCTCGTATCAAATTCATTTTCCTTCCAGATGACAAC
CAATCCCCTACCCCAGGAAAAGTCCCCTATTCTTCCCTCGAAACCAAAAA
AACCCACGTCAAAGAAGCTGTCGCTAAGCTCACTGGGTCACCTGACTCGC
CAACACTTGCCGGATTTGTTCTCGACATGTTCTGCATGTGCATGGTTGAC
GTTGCAGATGAACTTAGGGTTCCTAGTTATGTCTTCTTCACGTCGAGTGC
AGCTTCATTGGGTTCCTTTCTTAACGGCCAAGCTCTTTACGACCAAAACA
AGCTCACCACTGAGTTGATAGACTCGGGTGCTGATTTGCAAGTTCCGACG
CTTGTGAACTCAATT
back to top