CN184605

Overview
NameCN184605
Unique NameCN184605
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length643
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: HOX3_ORYSJ (Homeobox-leucine zipper protein HOX3 OS=Oryza sativa subsp. japonica GN=HOX3 PE=1 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 3.910e-49
Identity = 101/144 (70.14%), Postives = 113/144 (78.47%), Query Frame = -2
Query:  211 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPLPASTLSMCPRCERVTTTAVDKGPTKVTTASSTPAALSPKVGTPALQSR*PSAA 642
            ESFR NHTL PKQKE LA +LKL+PRQVEVWFQNRRAR+KLKQTEMECEYLKR FGSLTE+NRRLQREVEELRAM+V PPTV+SPH+ +PLPAS L+MCPRCER+T      GP  V    S+ AA +P    P    R PSAA
Sbjct:   92 ESFRLNHTLTPKQKEALAIKLKLRPRQVEVWFQNRRARTKLKQTEMECEYLKRCFGSLTEENRRLQREVEELRAMRVAPPTVLSPHTRQPLPASALTMCPRCERITAAT---GPPAVRPPPSSAAAAAPSPFHP----RRPSAA 228          
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: HOX3_ORYSI (Homeobox-leucine zipper protein HOX3 OS=Oryza sativa subsp. indica GN=HOX3 PE=1 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 3.910e-49
Identity = 101/144 (70.14%), Postives = 113/144 (78.47%), Query Frame = -2
Query:  211 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPLPASTLSMCPRCERVTTTAVDKGPTKVTTASSTPAALSPKVGTPALQSR*PSAA 642
            ESFR NHTL PKQKE LA +LKL+PRQVEVWFQNRRAR+KLKQTEMECEYLKR FGSLTE+NRRLQREVEELRAM+V PPTV+SPH+ +PLPAS L+MCPRCER+T      GP  V    S+ AA +P    P    R PSAA
Sbjct:   92 ESFRLNHTLTPKQKEALAIKLKLRPRQVEVWFQNRRARTKLKQTEMECEYLKRCFGSLTEENRRLQREVEELRAMRVAPPTVLSPHTRQPLPASALTMCPRCERITAAT---GPPAVRPPPSSAAAAAPSPFHP----RRPSAA 228          
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: ATB17_ARATH (Homeobox-leucine zipper protein ATHB-17 OS=Arabidopsis thaliana GN=ATHB-17 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 3.919e-41
Identity = 84/109 (77.06%), Postives = 90/109 (82.57%), Query Frame = -2
Query:  316 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPLPASTLSMCPRCERVTTTA 642
            +SFR NHTLNPKQKE LA  L L+PRQ+EVWFQNRRARSKLKQTEMECEYLKRWFGSLTE+N RL REVEELRAMKVGP TV S        AS+L+MCPRCERVT  A
Sbjct:  153 DSFRQNHTLNPKQKEVLAKHLMLRPRQIEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEENHRLHREVEELRAMKVGPTTVNS--------ASSLTMCPRCERVTPAA 253          
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: ATHBX_ARATH (Homeobox-leucine zipper protein ATHB-X OS=Arabidopsis thaliana GN=ATHB-X PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 5.482e-35
Identity = 80/117 (68.38%), Postives = 84/117 (71.79%), Query Frame = -2
Query:  292 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPLPASTLSMCPRCERVTTTAVDKGPTKV 642
            ESF  NHTL PKQK++LAT LKL  RQVEVWFQNRRARSKLK TEMECEYLKRWFGSL EQNRRLQ EVEELRA+K             P   S L+MCPRCERV T AVD     V
Sbjct:   83 ESFIQNHTLTPKQKKDLATFLKLSQRQVEVWFQNRRARSKLKHTEMECEYLKRWFGSLKEQNRRLQIEVEELRALK-------------PSSTSALTMCPRCERV-TDAVDNDSNAV 185          
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: HAT14_ARATH (Homeobox-leucine zipper protein HAT14 OS=Arabidopsis thaliana GN=HAT14 PE=2 SV=3)

HSP 1 Score: 144.05 bits (362), Expect = 6.061e-34
Identity = 75/137 (54.74%), Postives = 94/137 (68.61%), Query Frame = -2
Query:  232 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPLPASTLSMCPRCERVTTTAVDKGPTKVTTASSTPAALSPKVGTPALQ 642
            +SF+ + TLNPKQK  LA QL L+PRQVEVWFQNRRAR+KLKQTE++CEYLKR   SLTE+NRRLQ+EV+ELR +K   P  +       LPA+TL+MCP CERV T+A     +       + ++L P    PA Q
Sbjct:  204 DSFKEHSTLNPKQKIALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCESLTEENRRLQKEVKELRTLKTSTPFYMQ------LPATTLTMCPSCERVATSAAQPSTSAAHNLCLSTSSLIPVKPRPAKQ 334          
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: HOX11_ORYSJ (Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. japonica GN=HOX11 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.034e-33
Identity = 77/144 (53.47%), Postives = 97/144 (67.36%), Query Frame = -2
Query:  211 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPLPASTLSMCPRCERVTTTAVDKGPTKVTTASSTPAALSPKVGTPALQSR*PSAA 642
            ESF+ + TLNPKQK  LA QL L+PRQVEVWFQNRRAR+KLKQTE++CEYLKR   +LTE+NRRLQ+E+ ELRA+K   P  +       LPA+TLSMCP CERV + +     +   T+S+     +P  G  A  S   +AA
Sbjct:  191 ESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELAELRALKTVHPFYMH------LPATTLSMCPSCERVASNSAPATASSAATSSTAAPPAAPSSGGIAATSSSAAAA 328          
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: HOX11_ORYSI (Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. indica GN=HOX11 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.034e-33
Identity = 77/144 (53.47%), Postives = 97/144 (67.36%), Query Frame = -2
Query:  211 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPLPASTLSMCPRCERVTTTAVDKGPTKVTTASSTPAALSPKVGTPALQSR*PSAA 642
            ESF+ + TLNPKQK  LA QL L+PRQVEVWFQNRRAR+KLKQTE++CEYLKR   +LTE+NRRLQ+E+ ELRA+K   P  +       LPA+TLSMCP CERV + +     +   T+S+     +P  G  A  S   +AA
Sbjct:  104 ESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELAELRALKTVHPFYMH------LPATTLSMCPSCERVASNSAPATASSAATSSTAAPPAAPSSGGIAATSSSSAAA 241          
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: HOX27_ORYSJ (Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp. japonica GN=HOX27 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 3.929e-33
Identity = 74/129 (57.36%), Postives = 91/129 (70.54%), Query Frame = -2
Query:  265 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPLPASTLSMCPRCERVTT---TAVDKGPTKVTTASSTPAA 642
            ESF+ + TLNPKQK  LA QL L+PRQVEVWFQNRRAR+KLKQTE++CEYLKR   +LTE+NRRL +E+ ELRA+K   P  +       LPA+TLSMCP CERV +   TA    P   T+ ++ P A
Sbjct:  188 ESFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLHKELAELRALKTARPFYMH------LPATTLSMCPSCERVASNPATASTSAPAAATSPAAAPTA 310          
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: HOX27_ORYSI (Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp. indica GN=HOX27 PE=2 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 3.929e-33
Identity = 74/129 (57.36%), Postives = 91/129 (70.54%), Query Frame = -2
Query:  265 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPLPASTLSMCPRCERVTT---TAVDKGPTKVTTASSTPAA 642
            ESF+ + TLNPKQK  LA QL L+PRQVEVWFQNRRAR+KLKQTE++CEYLKR   +LTE+NRRL +E+ ELRA+K   P  +       LPA+TLSMCP CERV +   TA    P   T+ ++ P A
Sbjct:  188 ESFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLHKELAELRALKTARPFYMH------LPATTLSMCPSCERVASNPATASTSAPAAATSPAAAPTA 310          
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: HOX19_ORYSJ (Homeobox-leucine zipper protein HOX19 OS=Oryza sativa subsp. japonica GN=HOX19 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 7.409e-32
Identity = 76/135 (56.30%), Postives = 91/135 (67.41%), Query Frame = -2
Query:  268 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVIS-PHSCEP---------LPASTLSMCPRCERVTTTAVDKGPTKVTTASSTPA 642
            + FR + TLNPKQK  LA QL L+PRQVEVWFQNRRAR+KLKQTE++CE+LKR   +LTE+NRRLQRE++ELRA+K  PP   S  H   P         LPA+TL++CP CERV   A      KV  A  T A
Sbjct:  141 DRFREHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTEENRRLQRELQELRALKFAPPPPSSAAHQPSPAPPAPFYMQLPAATLTICPSCERVGGPA---SAAKVVAADGTKA 272          
The following BLAST results are available for this feature:
BLAST of CN184605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
HOX3_ORYSJ3.910e-4970.14Homeobox-leucine zipper protein HOX3 OS=Oryza sati... [more]
HOX3_ORYSI3.910e-4970.14Homeobox-leucine zipper protein HOX3 OS=Oryza sati... [more]
ATB17_ARATH3.919e-4177.06Homeobox-leucine zipper protein ATHB-17 OS=Arabido... [more]
ATHBX_ARATH5.482e-3568.38Homeobox-leucine zipper protein ATHB-X OS=Arabidop... [more]
HAT14_ARATH6.061e-3454.74Homeobox-leucine zipper protein HAT14 OS=Arabidops... [more]
HOX11_ORYSJ1.034e-3353.47Homeobox-leucine zipper protein HOX11 OS=Oryza sat... [more]
HOX11_ORYSI1.034e-3353.47Homeobox-leucine zipper protein HOX11 OS=Oryza sat... [more]
HOX27_ORYSJ3.929e-3357.36Homeobox-leucine zipper protein HOX27 OS=Oryza sat... [more]
HOX27_ORYSI3.929e-3357.36Homeobox-leucine zipper protein HOX27 OS=Oryza sat... [more]
HOX19_ORYSJ7.409e-3256.30Homeobox-leucine zipper protein HOX19 OS=Oryza sat... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005M09_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005M09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184605 ID=CN184605; Name=CN184605; organism=Citrus sinensis; type=EST; length=643bp
ACAATTAATTAAGATCGAGAAACAATCCCCAAGAAATTAACTAAGATATC
TAAGCAGATCAGATACCACACATATATATCAATGATAGTATCTTATCTTC
ATTGGTATCTTGCATGCACACTTGCATATTTCTTTTCCTATGAACATCCT
CTAAAACTAATTTCTCCTTTTGCTTTTGATTAATGTTTTGCCACGTTTAA
CTTTCCATCAGGCCGCCGAAGGCTACCGTGACTGGAGGGCCGGCGTCCCG
ACTTTAGGAGACAATGCCGCGGGAGTGGAGGAGGCGGTGGTGACCTTGGT
GGGGCCCTTGTCAACGGCGGTGGTGGTCACGCGCTCACACCGTGGACACA
TTGATAGGGTTGATGCCGGGAGTGGCTCACAACTGTGGGGAGAGATCACG
GTGGGTGGGCCCACCTTCATAGCCCTGAGCTCCTCCACTTCCCTTTGCAG
CCTCCTGTTTTGTTCAGTCAATGAACCAAACCATCTCTTCAAGTACTCGC
ATTCCATCTCCGTTTGCTTCAGCTTGCTCCTGGCCCTACGATTCTGAAAC
CAGACTTCAACTTGACGTGGCTTCAGCTTCAACTGCGTAGCCAGTTCTTC
TTTCTGCTTAGGGTTAAGGGTGTGGTTATGTCTGAAACTTTCT
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