CN184605
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: HOX3_ORYSJ (Homeobox-leucine zipper protein HOX3 OS=Oryza sativa subsp. japonica GN=HOX3 PE=1 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 3.910e-49 Identity = 101/144 (70.14%), Postives = 113/144 (78.47%), Query Frame = -2 Query: 211 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPLPASTLSMCPRCERVTTTAVDKGPTKVTTASSTPAALSPKVGTPALQSR*PSAA 642 ESFR NHTL PKQKE LA +LKL+PRQVEVWFQNRRAR+KLKQTEMECEYLKR FGSLTE+NRRLQREVEELRAM+V PPTV+SPH+ +PLPAS L+MCPRCER+T GP V S+ AA +P P R PSAA Sbjct: 92 ESFRLNHTLTPKQKEALAIKLKLRPRQVEVWFQNRRARTKLKQTEMECEYLKRCFGSLTEENRRLQREVEELRAMRVAPPTVLSPHTRQPLPASALTMCPRCERITAAT---GPPAVRPPPSSAAAAAPSPFHP----RRPSAA 228
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: HOX3_ORYSI (Homeobox-leucine zipper protein HOX3 OS=Oryza sativa subsp. indica GN=HOX3 PE=1 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 3.910e-49 Identity = 101/144 (70.14%), Postives = 113/144 (78.47%), Query Frame = -2 Query: 211 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPLPASTLSMCPRCERVTTTAVDKGPTKVTTASSTPAALSPKVGTPALQSR*PSAA 642 ESFR NHTL PKQKE LA +LKL+PRQVEVWFQNRRAR+KLKQTEMECEYLKR FGSLTE+NRRLQREVEELRAM+V PPTV+SPH+ +PLPAS L+MCPRCER+T GP V S+ AA +P P R PSAA Sbjct: 92 ESFRLNHTLTPKQKEALAIKLKLRPRQVEVWFQNRRARTKLKQTEMECEYLKRCFGSLTEENRRLQREVEELRAMRVAPPTVLSPHTRQPLPASALTMCPRCERITAAT---GPPAVRPPPSSAAAAAPSPFHP----RRPSAA 228
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: ATB17_ARATH (Homeobox-leucine zipper protein ATHB-17 OS=Arabidopsis thaliana GN=ATHB-17 PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 3.919e-41 Identity = 84/109 (77.06%), Postives = 90/109 (82.57%), Query Frame = -2 Query: 316 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPLPASTLSMCPRCERVTTTA 642 +SFR NHTLNPKQKE LA L L+PRQ+EVWFQNRRARSKLKQTEMECEYLKRWFGSLTE+N RL REVEELRAMKVGP TV S AS+L+MCPRCERVT A Sbjct: 153 DSFRQNHTLNPKQKEVLAKHLMLRPRQIEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEENHRLHREVEELRAMKVGPTTVNS--------ASSLTMCPRCERVTPAA 253
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: ATHBX_ARATH (Homeobox-leucine zipper protein ATHB-X OS=Arabidopsis thaliana GN=ATHB-X PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 5.482e-35 Identity = 80/117 (68.38%), Postives = 84/117 (71.79%), Query Frame = -2 Query: 292 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPLPASTLSMCPRCERVTTTAVDKGPTKV 642 ESF NHTL PKQK++LAT LKL RQVEVWFQNRRARSKLK TEMECEYLKRWFGSL EQNRRLQ EVEELRA+K P S L+MCPRCERV T AVD V Sbjct: 83 ESFIQNHTLTPKQKKDLATFLKLSQRQVEVWFQNRRARSKLKHTEMECEYLKRWFGSLKEQNRRLQIEVEELRALK-------------PSSTSALTMCPRCERV-TDAVDNDSNAV 185
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: HAT14_ARATH (Homeobox-leucine zipper protein HAT14 OS=Arabidopsis thaliana GN=HAT14 PE=2 SV=3) HSP 1 Score: 144.05 bits (362), Expect = 6.061e-34 Identity = 75/137 (54.74%), Postives = 94/137 (68.61%), Query Frame = -2 Query: 232 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPLPASTLSMCPRCERVTTTAVDKGPTKVTTASSTPAALSPKVGTPALQ 642 +SF+ + TLNPKQK LA QL L+PRQVEVWFQNRRAR+KLKQTE++CEYLKR SLTE+NRRLQ+EV+ELR +K P + LPA+TL+MCP CERV T+A + + ++L P PA Q Sbjct: 204 DSFKEHSTLNPKQKIALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCESLTEENRRLQKEVKELRTLKTSTPFYMQ------LPATTLTMCPSCERVATSAAQPSTSAAHNLCLSTSSLIPVKPRPAKQ 334
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: HOX11_ORYSJ (Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. japonica GN=HOX11 PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.034e-33 Identity = 77/144 (53.47%), Postives = 97/144 (67.36%), Query Frame = -2 Query: 211 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPLPASTLSMCPRCERVTTTAVDKGPTKVTTASSTPAALSPKVGTPALQSR*PSAA 642 ESF+ + TLNPKQK LA QL L+PRQVEVWFQNRRAR+KLKQTE++CEYLKR +LTE+NRRLQ+E+ ELRA+K P + LPA+TLSMCP CERV + + + T+S+ +P G A S +AA Sbjct: 191 ESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELAELRALKTVHPFYMH------LPATTLSMCPSCERVASNSAPATASSAATSSTAAPPAAPSSGGIAATSSSAAAA 328
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: HOX11_ORYSI (Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. indica GN=HOX11 PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.034e-33 Identity = 77/144 (53.47%), Postives = 97/144 (67.36%), Query Frame = -2 Query: 211 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPLPASTLSMCPRCERVTTTAVDKGPTKVTTASSTPAALSPKVGTPALQSR*PSAA 642 ESF+ + TLNPKQK LA QL L+PRQVEVWFQNRRAR+KLKQTE++CEYLKR +LTE+NRRLQ+E+ ELRA+K P + LPA+TLSMCP CERV + + + T+S+ +P G A S +AA Sbjct: 104 ESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELAELRALKTVHPFYMH------LPATTLSMCPSCERVASNSAPATASSAATSSTAAPPAAPSSGGIAATSSSSAAA 241
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: HOX27_ORYSJ (Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp. japonica GN=HOX27 PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 3.929e-33 Identity = 74/129 (57.36%), Postives = 91/129 (70.54%), Query Frame = -2 Query: 265 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPLPASTLSMCPRCERVTT---TAVDKGPTKVTTASSTPAA 642 ESF+ + TLNPKQK LA QL L+PRQVEVWFQNRRAR+KLKQTE++CEYLKR +LTE+NRRL +E+ ELRA+K P + LPA+TLSMCP CERV + TA P T+ ++ P A Sbjct: 188 ESFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLHKELAELRALKTARPFYMH------LPATTLSMCPSCERVASNPATASTSAPAAATSPAAAPTA 310
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: HOX27_ORYSI (Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp. indica GN=HOX27 PE=2 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 3.929e-33 Identity = 74/129 (57.36%), Postives = 91/129 (70.54%), Query Frame = -2 Query: 265 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPLPASTLSMCPRCERVTT---TAVDKGPTKVTTASSTPAA 642 ESF+ + TLNPKQK LA QL L+PRQVEVWFQNRRAR+KLKQTE++CEYLKR +LTE+NRRL +E+ ELRA+K P + LPA+TLSMCP CERV + TA P T+ ++ P A Sbjct: 188 ESFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLHKELAELRALKTARPFYMH------LPATTLSMCPSCERVASNPATASTSAPAAATSPAAAPTA 310
BLAST of CN184605 vs. ExPASy Swiss-Prot
Match: HOX19_ORYSJ (Homeobox-leucine zipper protein HOX19 OS=Oryza sativa subsp. japonica GN=HOX19 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 7.409e-32 Identity = 76/135 (56.30%), Postives = 91/135 (67.41%), Query Frame = -2 Query: 268 ESFRHNHTLNPKQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVIS-PHSCEP---------LPASTLSMCPRCERVTTTAVDKGPTKVTTASSTPA 642 + FR + TLNPKQK LA QL L+PRQVEVWFQNRRAR+KLKQTE++CE+LKR +LTE+NRRLQRE++ELRA+K PP S H P LPA+TL++CP CERV A KV A T A Sbjct: 141 DRFREHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTEENRRLQRELQELRALKFAPPPPSSAAHQPSPAPPAPFYMQLPAATLTICPSCERVGGPA---SAAKVVAADGTKA 272 The following BLAST results are available for this feature:
BLAST of CN184605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184605 ID=CN184605; Name=CN184605; organism=Citrus sinensis; type=EST; length=643bpback to top |