CN184590
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN184590 vs. ExPASy Swiss-Prot
Match: PSAG_ARATH (Photosystem I reaction center subunit V, chloroplastic OS=Arabidopsis thaliana GN=PSAG PE=1 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 7.246e-43 Identity = 77/121 (63.64%), Postives = 96/121 (79.34%), Query Frame = 3 Query: 108 ASSSLFTPSTITVRKHQISPSSISFQGLRPLNTR-AKTPLPKLATSAKRNSFGGIKAELNTPLVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGVTHFEAGDVRAKEYVSLLKSQRP 467 ++S+L +P+T + +P+SISF GLRPL + + LPKL+T+ +++S ++AEL+ +VISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNG THFEAGD RAKEYVSLLKS P Sbjct: 4 SASALLSPTTFSTAISHKNPNSISFHGLRPLRLGGSSSALPKLSTTGRKSSSAVVRAELSPSIVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGKTHFEAGDDRAKEYVSLLKSNDP 124 HSP 2 Score: 45.0542 bits (105), Expect = 7.246e-43 Identity = 18/19 (94.74%), Postives = 19/19 (100.00%), Query Frame = 1 Query: 460 NDPVGFNIVDVLAWGSIGH 516 NDP+GFNIVDVLAWGSIGH Sbjct: 122 NDPIGFNIVDVLAWGSIGH 140
BLAST of CN184590 vs. ExPASy Swiss-Prot
Match: PSAG_SPIOL (Photosystem I reaction center subunit V, chloroplastic OS=Spinacia oleracea GN=PSAG PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 3.231e-33 Identity = 66/99 (66.67%), Postives = 75/99 (75.76%), Query Frame = 3 Query: 177 SFQGLRPL--NTRAKTPLPKLATSAKRNSFGGIKAELNTPLVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGVTHFEAGDVRAKEYVSLLKSQRP 467 SF GLRPL N + L+ S+ R S +AEL+ LVISLSTGLSLFLGRFVFFNFQREN+AKQ +PEQNG++HFEAGD RAKEYVSLLKS P Sbjct: 36 SFSGLRPLKLNISSNNSSSSLSMSSARRSMT-CRAELSPSLVISLSTGLSLFLGRFVFFNFQRENMAKQ-VPEQNGMSHFEAGDTRAKEYVSLLKSNDP 132 HSP 2 Score: 45.4394 bits (106), Expect = 3.231e-33 Identity = 19/19 (100.00%), Postives = 19/19 (100.00%), Query Frame = 1 Query: 460 NDPVGFNIVDVLAWGSIGH 516 NDPVGFNIVDVLAWGSIGH Sbjct: 130 NDPVGFNIVDVLAWGSIGH 148
BLAST of CN184590 vs. ExPASy Swiss-Prot
Match: PSAG_HORVU (Photosystem I reaction center subunit V, chloroplastic OS=Hordeum vulgare GN=PSAG PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 2.976e-27 Identity = 56/103 (54.37%), Postives = 71/103 (68.93%), Query Frame = 3 Query: 159 ISPSSISFQGLRPLNTRAKTPLPKLATSAKRNSFGGIKAELNTPLVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGVTHFEAGDVRAKEYVSLLKSQRP 467 +SP +++ L P + RA ++ A+R+ +A L +VISLSTGLSL +GRFVFFNFQRENVAKQ +PEQNG THFEAGD RAKE+ +LKS P Sbjct: 9 LSPPAVAGLRLAP-SPRAAASFRGVSPPARRSV--AARAALEPSVVISLSTGLSLVMGRFVFFNFQRENVAKQ-VPEQNGKTHFEAGDERAKEFAGILKSNDP 107 HSP 2 Score: 44.669 bits (104), Expect = 2.976e-27 Identity = 18/19 (94.74%), Postives = 19/19 (100.00%), Query Frame = 1 Query: 460 NDPVGFNIVDVLAWGSIGH 516 NDPVGFN+VDVLAWGSIGH Sbjct: 105 NDPVGFNLVDVLAWGSIGH 123
BLAST of CN184590 vs. ExPASy Swiss-Prot
Match: PSAG_PEA (Photosystem I reaction center subunit V (Fragment) OS=Pisum sativum GN=PSAG PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 3.688e-13 Identity = 37/39 (94.87%), Postives = 37/39 (94.87%), Query Frame = 3 Query: 276 ELNTPLVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQ 392 ELN LVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQ Sbjct: 1 ELNPSLVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQ 39 The following BLAST results are available for this feature:
BLAST of CN184590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN184590 ID=CN184590; Name=CN184590; organism=Citrus sinensis; type=EST; length=518bpback to top |