CN184582

Overview
NameCN184582
Unique NameCN184582
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length555
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7880 contig Csv1_Contig7880:54..608. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CN184582 vs. ExPASy Swiss-Prot
Match: RAC3_ORYSJ (Rac-like GTP-binding protein 3 OS=Oryza sativa subsp. japonica GN=RAC3 PE=2 SV=1)

HSP 1 Score: 330.102 bits (845), Expect = 4.421e-90
Identity = 157/168 (93.45%), Postives = 164/168 (97.62%), Query Frame = 1 
Query:    1 TVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVAEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHYSPGVPVVLVGTKLDLREDKHYLADHPGLVPVTTAQGEELRKQIGAAYYIECSSKTQQNVKAVFDAAIKVVI 504
            TVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVV + TTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYEN++KKWIPELQHY+PGVP+VLVGTKLDLREDKHYL DHPG++PVTTAQGEELRKQIGAAYYIECSSKTQQNVK VFDAAIKVVI
Sbjct:   13 TVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVVDSTTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENIMKKWIPELQHYAPGVPIVLVGTKLDLREDKHYLLDHPGMIPVTTAQGEELRKQIGAAYYIECSSKTQQNVKGVFDAAIKVVI 180
[Close]
BLAST of CN184582 vs. ExPASy Swiss-Prot
Match: RAC4_ORYSJ (Rac-like GTP-binding protein 4 OS=Oryza sativa subsp. japonica GN=RAC4 PE=2 SV=1)

HSP 1 Score: 325.094 bits (832), Expect = 1.422e-88
Identity = 156/168 (92.86%), Postives = 162/168 (96.43%), Query Frame = 1 
Query:    1 TVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVAEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHYSPGVPVVLVGTKLDLREDKHYLADHPGLVPVTTAQGEELRKQIGAAYYIECSSKTQQNVKAVFDAAIKVVI 504
            TVGDGAVGKTCMLICYTSNKFPTDY+PTVFDNFSANVV +GTTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENV+KKW+PELQHY+PGVP+VLVGTKLDLREDKHYL DHP LVPVTTAQGEELRK IGA  YIECSSKTQQNVKAVFDAAIKVVI
Sbjct:   13 TVGDGAVGKTCMLICYTSNKFPTDYVPTVFDNFSANVVVDGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVMKKWLPELQHYAPGVPIVLVGTKLDLREDKHYLLDHPSLVPVTTAQGEELRKHIGATCYIECSSKTQQNVKAVFDAAIKVVI 180
[Close]
BLAST of CN184582 vs. ExPASy Swiss-Prot
Match: RAC10_ARATH (Rac-like GTP-binding protein ARAC10 OS=Arabidopsis thaliana GN=ARAC10 PE=1 SV=1)

HSP 1 Score: 324.324 bits (830), Expect = 2.426e-88
Identity = 157/168 (93.45%), Postives = 162/168 (96.43%), Query Frame = 1 
Query:    1 TVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVAEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHYSPGVPVVLVGTKLDLREDKHYLADHPGLVPVTTAQGEELRKQIGAAYYIECSSKTQQNVKAVFDAAIKVVI 504
            TVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVV EGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFVL+FSLVSRASYENV KKWIPELQH++PGVP+VLVGTKLDLREDKHYLADHPGL PVTTAQGEELRK IGA YYIECSSKTQQNVKAVFD+AIK VI
Sbjct:   13 TVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLSFSLVSRASYENVFKKWIPELQHFAPGVPLVLVGTKLDLREDKHYLADHPGLSPVTTAQGEELRKLIGATYYIECSSKTQQNVKAVFDSAIKEVI 180
[Close]
BLAST of CN184582 vs. ExPASy Swiss-Prot
Match: RAC8_ARATH (Rac-like GTP-binding protein ARAC8 OS=Arabidopsis thaliana GN=ARAC8 PE=1 SV=2)

HSP 1 Score: 322.013 bits (824), Expect = 1.204e-87
Identity = 153/168 (91.07%), Postives = 161/168 (95.83%), Query Frame = 1 
Query:    1 TVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVAEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHYSPGVPVVLVGTKLDLREDKHYLADHPGLVPVTTAQGEELRKQIGAAYYIECSSKTQQNVKAVFDAAIKVVI 504
            TVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFS NVV EG TVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSL+SRASYENV KKWIPELQH++PGVP+VLVGTK+DLRED+HYL+DHPGL PVTT+QGEELRK IGA YYIECSSKTQQNVKAVFDAAIKVVI
Sbjct:   13 TVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSVNVVVEGITVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLISRASYENVFKKWIPELQHFAPGVPIVLVGTKMDLREDRHYLSDHPGLSPVTTSQGEELRKHIGATYYIECSSKTQQNVKAVFDAAIKVVI 180
[Close]
BLAST of CN184582 vs. ExPASy Swiss-Prot
Match: RAC1_LOTJA (Rac-like GTP-binding protein RAC1 OS=Lotus japonicus GN=RAC1 PE=2 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 1.055e-83
Identity = 144/168 (85.71%), Postives = 160/168 (95.24%), Query Frame = 1 
Query:    1 TVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVAEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHYSPGVPVVLVGTKLDLREDKHYLADHPGLVPVTTAQGEELRKQIGAAYYIECSSKTQQNVKAVFDAAIKVVI 504
            TVGDGAVGKTC+LI YTSN FPTDY+PTVFDNFSANVV +G+TVNLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSL+S+ASYEN+ KKWIPEL+HY+PGVP++LVGTKLDLR+DKH+LADHPG VP+TTAQGEELRK IGA  YIECSSKTQQNVKAVFDAAIKVV+
Sbjct:   11 TVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENIAKKWIPELRHYAPGVPIILVGTKLDLRDDKHFLADHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKVVL 178
[Close]
BLAST of CN184582 vs. ExPASy Swiss-Prot
Match: RAC6_ORYSJ (Rac-like GTP-binding protein 6 OS=Oryza sativa subsp. japonica GN=RAC6 PE=2 SV=1)

HSP 1 Score: 304.679 bits (779), Expect = 1.989e-82
Identity = 143/168 (85.12%), Postives = 156/168 (92.86%), Query Frame = 1 
Query:    1 TVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVAEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHYSPGVPVVLVGTKLDLREDKHYLADHPGLVPVTTAQGEELRKQIGAAYYIECSSKTQQNVKAVFDAAIKVVI 504
            TVGDGAVGKTCMLI YTSN FPTDY+PTVFDNFSANVV +G TVNLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSL+S+ASYENV KKWIPEL+HY+PGVP++LVGTKLDLR+DK +  DHPG VP+TTAQGEELRKQIGA YYIECSSKTQ NVK VFDAAIKVV+
Sbjct:   11 TVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFVDHPGAVPITTAQGEELRKQIGAPYYIECSSKTQLNVKGVFDAAIKVVL 178
[Close]
BLAST of CN184582 vs. ExPASy Swiss-Prot
Match: RAC5_ORYSJ (Rac-like GTP-binding protein 5 OS=Oryza sativa subsp. japonica GN=RAC5 PE=2 SV=2)

HSP 1 Score: 303.138 bits (775), Expect = 5.788e-82
Identity = 142/168 (84.52%), Postives = 158/168 (94.05%), Query Frame = 1 
Query:    1 TVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVAEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHYSPGVPVVLVGTKLDLREDKHYLADHPGLVPVTTAQGEELRKQIGAAYYIECSSKTQQNVKAVFDAAIKVVI 504
            TVGDGAVGKTCMLI YTSN FPTDY+PTVFDNFSANVV +G+TVNLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSL+S+ASYENV KKWIPEL+HY+PGVP++LVGTKLDLR+DK +  DHPG VP++TAQGEELRK IGAA YIECSSKTQQN+KAVFDAAIKVV+
Sbjct:   11 TVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVSKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFVDHPGAVPISTAQGEELRKLIGAAAYIECSSKTQQNIKAVFDAAIKVVL 178
[Close]
BLAST of CN184582 vs. ExPASy Swiss-Prot
Match: RAC2_LOTJA (Rac-like GTP-binding protein RAC2 OS=Lotus japonicus GN=RAC2 PE=2 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 9.873e-82
Identity = 143/168 (85.12%), Postives = 157/168 (93.45%), Query Frame = 1 
Query:    1 TVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVAEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHYSPGVPVVLVGTKLDLREDKHYLADHPGLVPVTTAQGEELRKQIGAAYYIECSSKTQQNVKAVFDAAIKVVI 504
            TVGDGAVGKTCMLI YTSN FPTDY+PTVFDNFSANVV +G+TVNLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSL+SRASYEN+ KKWIPEL+HY+P VP+VLVGTKLDLRED+ YL DHPG  P+TTAQGEEL+K IGAA Y+ECSSKTQQNVKAVFDAAIKVV+
Sbjct:   11 TVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLLSRASYENISKKWIPELRHYAPTVPIVLVGTKLDLREDRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVL 178
[Close]
BLAST of CN184582 vs. ExPASy Swiss-Prot
Match: RAC11_ARATH (Rac-like GTP-binding protein ARAC11 OS=Arabidopsis thaliana GN=ARAC11 PE=1 SV=2)

HSP 1 Score: 302.368 bits (773), Expect = 9.873e-82
Identity = 142/168 (84.52%), Postives = 157/168 (93.45%), Query Frame = 1 
Query:    1 TVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVAEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHYSPGVPVVLVGTKLDLREDKHYLADHPGLVPVTTAQGEELRKQIGAAYYIECSSKTQQNVKAVFDAAIKVVI 504
            TVGDGAVGKTC+LI YTSN FPTDY+PTVFDNFSANVV  G+TVNLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSL+S+ASYENV KKWIPEL+HY+PGVP+VLVGTKLDLR+DK +  DHPG VP+TTAQGEELRKQIGA  YIECSSKTQ+NVKAVFDAAI+VV+
Sbjct:   11 TVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKLDLRDDKQFFIDHPGAVPITTAQGEELRKQIGAPTYIECSSKTQENVKAVFDAAIRVVL 178
[Close]
BLAST of CN184582 vs. ExPASy Swiss-Prot
Match: RAC1_BETVU (Rac-like GTP-binding protein RHO1 OS=Beta vulgaris GN=RHO1 PE=2 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 1.684e-81
Identity = 143/168 (85.12%), Postives = 155/168 (92.26%), Query Frame = 1 
Query:    1 TVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVAEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHYSPGVPVVLVGTKLDLREDKHYLADHPGLVPVTTAQGEELRKQIGAAYYIECSSKTQQNVKAVFDAAIKVVI 504
            TVGDGAVGKTC+LI YTSN FPTDY+PTVFDNFSANVV  G TVNLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSL+S+ASYENV KKWIPEL+HY+PGVP+VLVGTKLDLR+DK +  DHPG VP+TTAQGEELRK IGA  YIECSSKTQQNVKAVFDAAIKVV+
Sbjct:   11 TVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKLDLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKVVL 178
The following BLAST results are available for this feature:
BLAST of CN184582 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RAC3_ORYSJ4.421e-9093.45Rac-like GTP-binding protein 3 OS=Oryza sativa sub... [more]
RAC4_ORYSJ1.422e-8892.86Rac-like GTP-binding protein 4 OS=Oryza sativa sub... [more]
RAC10_ARATH2.426e-8893.45Rac-like GTP-binding protein ARAC10 OS=Arabidopsis... [more]
RAC8_ARATH1.204e-8791.07Rac-like GTP-binding protein ARAC8 OS=Arabidopsis ... [more]
RAC1_LOTJA1.055e-8385.71Rac-like GTP-binding protein RAC1 OS=Lotus japonic... [more]
RAC6_ORYSJ1.989e-8285.12Rac-like GTP-binding protein 6 OS=Oryza sativa sub... [more]
RAC5_ORYSJ5.788e-8284.52Rac-like GTP-binding protein 5 OS=Oryza sativa sub... [more]
RAC2_LOTJA9.873e-8285.12Rac-like GTP-binding protein RAC2 OS=Lotus japonic... [more]
RAC11_ARATH9.873e-8284.52Rac-like GTP-binding protein ARAC11 OS=Arabidopsis... [more]
RAC1_BETVU1.684e-8185.12Rac-like GTP-binding protein RHO1 OS=Beta vulgaris... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005L21_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005L21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184582 ID=CN184582; Name=CN184582; organism=Citrus sinensis; type=EST; length=555bp
ACAGTTGGTGATGGGGCTGTTGGCAAAACTTGCATGCTTATTTGCTACAC
AAGTAACAAGTTTCCTACTGATTATATACCAACGGTGTTCGACAACTTCA
GTGCAAATGTGGTAGCTGAAGGCACTACTGTCAACTTAGGCCTCTGGGAC
ACAGCTGGGCAAGAGGATTACAATAGATTAAGGCCTTTGAGCTACAGAGG
GGCAGACGTTTTTGTCTTAGCTTTCTCATTAGTCAGTCGAGCCAGCTATG
AAAACGTTCTAAAAAAGTGGATCCCTGAACTTCAGCATTACTCTCCCGGA
GTACCAGTTGTATTGGTTGGCACCAAATTGGATCTTCGAGAGGATAAGCA
TTATTTGGCTGATCATCCAGGATTGGTGCCTGTGACCACTGCACAAGGAG
AGGAACTCCGTAAACAGATTGGTGCTGCATATTACATTGAATGCAGCTCG
AAAACTCAGCAGAATGTAAAAGCAGTTTTTGATGCTGCAATCAAGGTAGT
TATCAAACCCCCGCAGAAGCAAAAGGAGAAGAAGAAAAAACAACCGAGGA
TGCCT
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