CN184576

Overview
NameCN184576
Unique NameCN184576
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length414
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CN184576 vs. ExPASy Swiss-Prot
Match: NDUA5_ARATH (Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial OS=Arabidopsis thaliana GN=At5g52840 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.320e-15
Identity = 48/81 (59.26%), Postives = 57/81 (70.37%), Query Frame = -2 
Query:  180 EAQDELTLIGKNDRVGILGVFLMTTKCEVIENDAPVPKHVPLHRPGPLPEEFHKTLE---AVTKKDLTAVTSSESQSRLKE 413
            EA+DELTLIGK       GV     +CEVIENDAP+PKHVP HRPGPLPE+F+KTLE   A +K ++ A T S+ Q  LKE
Sbjct:   92 EARDELTLIGKMIEWDPWGV-PDDYECEVIENDAPIPKHVPQHRPGPLPEQFYKTLEGLIAESKTEIPAATPSDPQ--LKE 169
The following BLAST results are available for this feature:
BLAST of CN184576 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
NDUA5_ARATH1.320e-1559.26Probable NADH dehydrogenase [ubiquinone] 1 alpha s... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_0005L17_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005L17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184576 ID=CN184576; Name=CN184576; organism=Citrus sinensis; type=EST; length=414bp
CTGTTCATATATTATTAACCCAATGGTTCAAGCCTTTTGTCTCATAAATC
AAAACTCTATGCAATCTAAGGAAACAGGCAAGATACAAGATAAAGAGCAA
GAACAAGAGAAAATATGCAGGCAAAGAGACAGCTTTGACTATGAAACTCA
ACATTCTTCCAGACAGGAGCAGCATACTACTCCTTCAGCCGTGATTGTGA
CTCACTAGAGGTGACTGCAGTAAGATCCTTTTTGGTAACAGCTTCCAGCG
TCTTATGGAATTCCTCAGGCAGAGGTCCAGGTCGATGCAGGGGAACATGC
TTGGGAACCGGAGCATCATTCTCAATAACTTCACATTTCGTAGTCATCAG
GAACACCCCAAGGATCCCCACTCGATCATTTTTCCCGATGAGCGTGAGCT
CATCCTGAGCCTCC
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