CN184572

Overview
NameCN184572
Unique NameCN184572
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length764
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CN184572_ssr16 microsatellite CN184572_ssr16:16..25. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig13557 contig Csv1_Contig13557:21..784. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN184572 vs. ExPASy Swiss-Prot
Match: ENO_RICCO (Enolase OS=Ricinus communis PE=2 SV=1)

HSP 1 Score: 432.18 bits (1110), Expect = 1.517e-120
Identity = 212/233 (90.99%), Postives = 223/233 (95.71%), Query Frame = 1
Query:   64 MAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDESGFAPNIQENKEGLELL 762
            MAITI +V+ARQIFDSRGNPTVE D+  SDGH+ARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAV NVN+IIGPAL GKDPTEQTA+DN+MVQ+LDGTVNEWGWCKQKLGANAILAVSLA+CKAGAHVK IPLYKHIA L+GNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMG EVYHHLK+VIKKKYGQDATNVGDE GFAPNIQENKEGLELL
Sbjct:    1 MAITIVSVRARQIFDSRGNPTVEADIKLSDGHLARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVENVNSIIGPALIGKDPTEQTALDNFMVQELDGTVNEWGWCKQKLGANAILAVSLALCKAGAHVKGIPLYKHIANLAGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGAEVYHHLKSVIKKKYGQDATNVGDEGGFAPNIQENKEGLELL 233          
BLAST of CN184572 vs. ExPASy Swiss-Prot
Match: ENO1_HEVBR (Enolase 1 OS=Hevea brasiliensis GN=ENO1 PE=1 SV=1)

HSP 1 Score: 426.787 bits (1096), Expect = 6.372e-119
Identity = 211/233 (90.56%), Postives = 220/233 (94.42%), Query Frame = 1
Query:   64 MAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDESGFAPNIQENKEGLELL 762
            MAITI +V+ARQIFDSRGNPTVE DV  SDG++ARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAV NVN IIGPAL GKDPT+Q  IDN+MVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVK IPLY+HIA L+GNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMG EVYHHLK+VIKKKYGQDATNVGDE GFAPNIQENKEGLELL
Sbjct:    1 MAITIVSVRARQIFDSRGNPTVEADVKLSDGYLARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVENVNIIIGPALVGKDPTDQVGIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKGIPLYEHIANLAGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGAEVYHHLKSVIKKKYGQDATNVGDEGGFAPNIQENKEGLELL 233          
BLAST of CN184572 vs. ExPASy Swiss-Prot
Match: ENO2_HEVBR (Enolase 2 OS=Hevea brasiliensis GN=ENO2 PE=1 SV=1)

HSP 1 Score: 426.017 bits (1094), Expect = 1.087e-118
Identity = 210/233 (90.13%), Postives = 219/233 (93.99%), Query Frame = 1
Query:   64 MAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDESGFAPNIQENKEGLELL 762
            MAITI +V+ARQIFDSRGNPTVE DV  SDG++ARAAVP GASTGIYEALELRDGGSDYLGKGVSKAV NVN IIGPAL GKDPT+Q  IDN+MVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVK IPLYKH+A L+GNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMG EVYHHLK+VIKKKYGQDATNVGDE GFAPNIQENKEGLELL
Sbjct:    1 MAITIVSVRARQIFDSRGNPTVEADVKLSDGYLARAAVPRGASTGIYEALELRDGGSDYLGKGVSKAVENVNIIIGPALVGKDPTDQVGIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKGIPLYKHVANLAGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGAEVYHHLKSVIKKKYGQDATNVGDEGGFAPNIQENKEGLELL 233          
BLAST of CN184572 vs. ExPASy Swiss-Prot
Match: ENO1_MAIZE (Enolase 1 OS=Zea mays GN=ENO1 PE=2 SV=1)

HSP 1 Score: 415.616 bits (1067), Expect = 1.469e-115
Identity = 208/233 (89.27%), Postives = 216/233 (92.70%), Query Frame = 1
Query:   64 MAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDESGFAPNIQENKEGLELL 762
            MA+TIT VKARQIFDSRGNPTVEVDV  SDG  AR AVPSGASTGIYEALELRDGGSDYLGKGV KAVSNVN IIGPA+ GKDPTEQ  IDN+MVQQLDGT NEWGWCKQKLGANAILAVSLAVCKAGA VKKIPLY+HIA L+GNK LVLPVPAFNVINGGSHAGNKLAMQEFMILP GASSFKEAMKMGVEVYH+LK++IKKKYGQDATNVGDE GFAPNIQENKEGLELL
Sbjct:    1 MAVTITWVKARQIFDSRGNPTVEVDVGLSDGSYARGAVPSGASTGIYEALELRDGGSDYLGKGVLKAVSNVNNIIGPAIVGKDPTEQVEIDNFMVQQLDGTSNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLVLPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFKEAMKMGVEVYHNLKSIIKKKYGQDATNVGDEGGFAPNIQENKEGLELL 233          
BLAST of CN184572 vs. ExPASy Swiss-Prot
Match: ENO2_MAIZE (Enolase 2 OS=Zea mays GN=ENO2 PE=2 SV=1)

HSP 1 Score: 413.305 bits (1061), Expect = 7.290e-115
Identity = 205/233 (87.98%), Postives = 217/233 (93.13%), Query Frame = 1
Query:   64 MAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDESGFAPNIQENKEGLELL 762
            MA TI +VKARQIFDSRGNPTVEVDV  SDG  ARAAVPSGASTG+YEALELRDGGS YLGKGVSKAV+NVN++IGPAL GKDPT QT IDN+MVQQLDGT NEWGWCKQKLGANAILAVSLAVCKAGA +K+IPLY+HIA L+GNK LVLPVPAFNVINGGSHAGNKLAMQEFMILP GA+SFKEAMKMGVEVYHHLK+VIKKKYGQDATNVGDE GFAPNIQENKEGLELL
Sbjct:    1 MAATIQSVKARQIFDSRGNPTVEVDVFCSDGTFARAAVPSGASTGVYEALELRDGGSYYLGKGVSKAVNNVNSVIGPALIGKDPTAQTEIDNFMVQQLDGTKNEWGWCKQKLGANAILAVSLAVCKAGASIKRIPLYQHIANLAGNKQLVLPVPAFNVINGGSHAGNKLAMQEFMILPTGAASFKEAMKMGVEVYHHLKSVIKKKYGQDATNVGDEGGFAPNIQENKEGLELL 233          
BLAST of CN184572 vs. ExPASy Swiss-Prot
Match: ENO_MESCR (Enolase OS=Mesembryanthemum crystallinum GN=PGH1 PE=2 SV=1)

HSP 1 Score: 410.994 bits (1055), Expect = 3.618e-114
Identity = 201/231 (87.01%), Postives = 214/231 (92.64%), Query Frame = 1
Query:   70 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDESGFAPNIQENKEGLELL 762
            +TI  VKARQI+DSRGNPTVE D+   DG  ARAAVPSGASTG+YEALELRDGG DY+GKGV KAV NVN IIGPAL GKDPT+QTAIDN+MVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGA VKKIPLY+HIAE++GNKN+VLPVPAFNVINGGSHAGNKLAMQEFMILP GASSFKEAMKMG EVYH+LK+VIKKKYGQDATNVGDE GFAPNIQENKEGLELL
Sbjct:    2 VTIKCVKARQIYDSRGNPTVEADIHLDDGTYARAAVPSGASTGVYEALELRDGGKDYMGKGVYKAVKNVNEIIGPALVGKDPTQQTAIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAQVKKIPLYQHIAEIAGNKNMVLPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFKEAMKMGSEVYHNLKSVIKKKYGQDATNVGDEGGFAPNIQENKEGLELL 232          
BLAST of CN184572 vs. ExPASy Swiss-Prot
Match: ENO_ORYSJ (Enolase OS=Oryza sativa subsp. japonica GN=ENO1 PE=1 SV=2)

HSP 1 Score: 409.838 bits (1052), Expect = 8.060e-114
Identity = 202/233 (86.70%), Postives = 215/233 (92.27%), Query Frame = 1
Query:   64 MAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDESGFAPNIQENKEGLELL 762
            MA TI +VKARQIFDSRGNPTVEVDV  SDG  ARAAVPSGASTG+YEALELRDGGSDYLGKGVSKAV NVN++I PAL GKDPT Q  +DN+MVQQLDGT NEWGWCKQKLGANAILAVSLA+CKAGA +KKIPLY+HIA L+GNK LVLPVPAFNVINGGSHAGNKLAMQEFMILP GA+SFKEAMKMGVEVYH+LK+VIKKKYGQDATNVGDE GFAPNIQENKEGLELL
Sbjct:    1 MAATIVSVKARQIFDSRGNPTVEVDVCCSDGTFARAAVPSGASTGVYEALELRDGGSDYLGKGVSKAVDNVNSVIAPALIGKDPTSQAELDNFMVQQLDGTKNEWGWCKQKLGANAILAVSLAICKAGAIIKKIPLYQHIANLAGNKQLVLPVPAFNVINGGSHAGNKLAMQEFMILPTGAASFKEAMKMGVEVYHNLKSVIKKKYGQDATNVGDEGGFAPNIQENKEGLELL 233          
BLAST of CN184572 vs. ExPASy Swiss-Prot
Match: ENO_SOLLC (Enolase OS=Solanum lycopersicum GN=PGH1 PE=2 SV=1)

HSP 1 Score: 409.453 bits (1051), Expect = 1.053e-113
Identity = 201/230 (87.39%), Postives = 216/230 (93.91%), Query Frame = 1
Query:   73 TITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDESGFAPNIQENKEGLELL 762
            TI ++KARQIFDSRGNPTVEVDV  S+G  ARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAV+NVN+IIGPAL GKDPT+QT +DN+MV QLDGT NEWGWCK+KLGANAILAVSLAVCKAGA V+ +PLYKHIA+L+GNK LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGA++FKEAMKMG EVYHHLKAVIKKKYGQDATNVGDE GFAPNIQENKEGLELL
Sbjct:    3 TIKSIKARQIFDSRGNPTVEVDVHISNGVFARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVNNVNSIIGPALVGKDPTDQTGLDNFMVHQLDGTQNEWGWCKEKLGANAILAVSLAVCKAGAAVRNVPLYKHIADLAGNKKLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGAANFKEAMKMGCEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELL 232          
BLAST of CN184572 vs. ExPASy Swiss-Prot
Match: ENO_ALNGL (Enolase OS=Alnus glutinosa GN=PGH1 PE=2 SV=1)

HSP 1 Score: 408.297 bits (1048), Expect = 2.345e-113
Identity = 206/230 (89.57%), Postives = 215/230 (93.48%), Query Frame = 1
Query:   76 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAID-NYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDESGFAPNIQENKEGLELL 762
            IT +KARQIFDSRGNPTVE +VTT++G V+RAAVPSGASTG+YEALELRDGGSDYLGKGV KAV NVN IIGPAL GKD TEQTAID ++M QQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGA VKKIPLYKHIA L+GN  LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDE GFAPNIQENKEGLELL
Sbjct:    4 ITHIKARQIFDSRGNPTVEAEVTTANGVVSRAAVPSGASTGVYEALELRDGGSDYLGKGVLKAVDNVNKIIGPALIGKDATEQTAIDIDFMFQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGASVKKIPLYKHIANLAGNPKLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELL 233          
BLAST of CN184572 vs. ExPASy Swiss-Prot
Match: ENO_ARATH (Enolase OS=Arabidopsis thaliana GN=ENO PE=1 SV=1)

HSP 1 Score: 406.371 bits (1043), Expect = 8.912e-113
Identity = 203/230 (88.26%), Postives = 212/230 (92.17%), Query Frame = 1
Query:   73 TITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDESGFAPNIQENKEGLELL 762
            TIT VKARQIFDSRGNPTVEVD+ TS+G    AAVPSGASTGIYEALELRDGGSDYLGKGVSKAV NVN IIGPAL GKDPT+QTAIDN+MV +LDGT NEWGWCKQKLGANAILAVSLAVCKAGA V  IPLYKHIA L+GN  +VLPVPAFNVINGGSHAGNKLAMQEFMILPVGA+SFKEAMKMGVEVYHHLK+VIKKKYGQDATNVGDE GFAPNIQENKEGLELL
Sbjct:    3 TITVVKARQIFDSRGNPTVEVDIHTSNGIKVTAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVGNVNNIIGPALIGKDPTQQTAIDNFMVHELDGTQNEWGWCKQKLGANAILAVSLAVCKAGAVVSGIPLYKHIANLAGNPKIVLPVPAFNVINGGSHAGNKLAMQEFMILPVGAASFKEAMKMGVEVYHHLKSVIKKKYGQDATNVGDEGGFAPNIQENKEGLELL 232          
The following BLAST results are available for this feature:
BLAST of CN184572 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENO_RICCO1.517e-12090.99Enolase OS=Ricinus communis PE=2 SV=1[more]
ENO1_HEVBR6.372e-11990.56Enolase 1 OS=Hevea brasiliensis GN=ENO1 PE=1 SV=1[more]
ENO2_HEVBR1.087e-11890.13Enolase 2 OS=Hevea brasiliensis GN=ENO2 PE=1 SV=1[more]
ENO1_MAIZE1.469e-11589.27Enolase 1 OS=Zea mays GN=ENO1 PE=2 SV=1[more]
ENO2_MAIZE7.290e-11587.98Enolase 2 OS=Zea mays GN=ENO2 PE=2 SV=1[more]
ENO_MESCR3.618e-11487.01Enolase OS=Mesembryanthemum crystallinum GN=PGH1 P... [more]
ENO_ORYSJ8.060e-11486.70Enolase OS=Oryza sativa subsp. japonica GN=ENO1 PE... [more]
ENO_SOLLC1.053e-11387.39Enolase OS=Solanum lycopersicum GN=PGH1 PE=2 SV=1[more]
ENO_ALNGL2.345e-11389.57Enolase OS=Alnus glutinosa GN=PGH1 PE=2 SV=1[more]
ENO_ARATH8.912e-11388.26Enolase OS=Arabidopsis thaliana GN=ENO PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005L14_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005L14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184572 ID=CN184572; Name=CN184572; organism=Citrus sinensis; type=EST; length=764bp
AGTCGCACTCACAGACTCTCTCTCTCGTTCTAGATCTTTCTTCGCTTTTC
CAGCTTTCAGAAAATGGCAATAACCATCACTGCCGTCAAAGCCAGGCAGA
TCTTTGACAGCCGTGGAAATCCAACGGTGGAGGTCGACGTGACAACATCA
GATGGCCACGTGGCTAGAGCTGCTGTTCCAAGCGGTGCATCCACCGGAAT
TTATGAGGCGCTTGAACTAAGAGACGGAGGCTCTGATTACCTAGGCAAGG
GTGTATCGAAGGCTGTTAGCAATGTCAACGCCATCATTGGCCCTGCACTC
GCTGGCAAGGACCCAACTGAGCAGACTGCTATTGACAACTATATGGTACA
ACAACTTGATGGAACTGTAAATGAGTGGGGTTGGTGCAAACAGAAGCTTG
GAGCAAACGCCATTTTGGCTGTCTCCCTAGCTGTCTGCAAGGCTGGTGCA
CATGTCAAGAAGATTCCTCTTTACAAGCATATTGCCGAACTCTCTGGTAA
CAAGAATTTGGTGTTGCCAGTGCCAGCATTCAATGTCATTAATGGTGGAT
CACATGCTGGAAACAAACTTGCTATGCAGGAGTTTATGATTCTTCCTGTA
GGAGCTTCCTCTTTCAAAGAAGCCATGAAGATGGGTGTAGAAGTATATCA
CCATCTGAAGGCTGTGATTAAAAAGAAATACGGCCAGGATGCTACAAATG
TTGGGGATGAAAGCGGTTTTGCTCCCAATATTCAGGAGAACAAGGAAGGA
CTTGAATTGCTCAA
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