CN184571

Overview
NameCN184571
Unique NameCN184571
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length349
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9095 contig Csv1_Contig9095:67..415. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN184571 vs. ExPASy Swiss-Prot
Match: ENO_RICCO (Enolase OS=Ricinus communis PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.107e-11
Identity = 32/34 (94.12%), Postives = 33/34 (97.06%), Query Frame = -2
Query:  229 KRLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 330
            +RLAKYNQLLRIEEELGAEAVYAGAKFR PVEPY
Sbjct:  412 ERLAKYNQLLRIEEELGAEAVYAGAKFRTPVEPY 445          

HSP 2 Score: 20.7866 bits (42), Expect = 2.107e-11
Identity = 8/11 (72.73%), Postives = 8/11 (72.73%), Query Frame = -1
Query:  317 GAPCRSEASCK 349
            GAPCRSE   K
Sbjct:  406 GAPCRSERLAK 416          
BLAST of CN184571 vs. ExPASy Swiss-Prot
Match: ENO_ORYSJ (Enolase OS=Oryza sativa subsp. japonica GN=ENO1 PE=1 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 3.550e-11
Identity = 32/34 (94.12%), Postives = 33/34 (97.06%), Query Frame = -2
Query:  229 KRLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 330
            +RLAKYNQLLRIEEELGA AVYAGAKFRAPVEPY
Sbjct:  413 ERLAKYNQLLRIEEELGAAAVYAGAKFRAPVEPY 446          

HSP 2 Score: 20.7866 bits (42), Expect = 3.550e-11
Identity = 8/11 (72.73%), Postives = 8/11 (72.73%), Query Frame = -1
Query:  317 GAPCRSEASCK 349
            GAPCRSE   K
Sbjct:  407 GAPCRSERLAK 417          
BLAST of CN184571 vs. ExPASy Swiss-Prot
Match: ENO2_MAIZE (Enolase 2 OS=Zea mays GN=ENO2 PE=2 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 5.980e-11
Identity = 32/34 (94.12%), Postives = 33/34 (97.06%), Query Frame = -2
Query:  229 KRLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 330
            +RLAKYNQLLRIEEELGA AVYAGAKFRAPVEPY
Sbjct:  413 ERLAKYNQLLRIEEELGAIAVYAGAKFRAPVEPY 446          

HSP 2 Score: 20.7866 bits (42), Expect = 5.980e-11
Identity = 8/11 (72.73%), Postives = 8/11 (72.73%), Query Frame = -1
Query:  317 GAPCRSEASCK 349
            GAPCRSE   K
Sbjct:  407 GAPCRSERLAK 417          
BLAST of CN184571 vs. ExPASy Swiss-Prot
Match: ENO2_HEVBR (Enolase 2 OS=Hevea brasiliensis GN=ENO2 PE=1 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 7.764e-11
Identity = 31/34 (91.18%), Postives = 32/34 (94.12%), Query Frame = -2
Query:  229 KRLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 330
            +RLAKYNQLLRIEEELGAEAVYAGA FR PVEPY
Sbjct:  412 ERLAKYNQLLRIEEELGAEAVYAGANFRTPVEPY 445          

HSP 2 Score: 20.7866 bits (42), Expect = 7.764e-11
Identity = 8/11 (72.73%), Postives = 8/11 (72.73%), Query Frame = -1
Query:  317 GAPCRSEASCK 349
            GAPCRSE   K
Sbjct:  406 GAPCRSERLAK 416          
The following BLAST results are available for this feature:
BLAST of CN184571 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
ENO_RICCO2.107e-1194.12Enolase OS=Ricinus communis PE=2 SV=1[more]
ENO_ORYSJ3.550e-1194.12Enolase OS=Oryza sativa subsp. japonica GN=ENO1 PE... [more]
ENO2_MAIZE5.980e-1194.12Enolase 2 OS=Zea mays GN=ENO2 PE=2 SV=1[more]
ENO2_HEVBR7.764e-1191.18Enolase 2 OS=Hevea brasiliensis GN=ENO2 PE=1 SV=1[more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_0005L14_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005L14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184571 ID=CN184571; Name=CN184571; organism=Citrus sinensis; type=EST; length=349bp
ATGCCTTAGCACCGCACTAGATACTCATTTAATAAAACATGCTCTAGGAA
ATGGTTCCTCATACAGCAAGGTTCAAGCTCTCAGACAAAAACTGTGTCAA
AATTATTGAGGAAATATCTTGGGTCACAAAATGCTAAAAACCCATAAAAA
TCCATTTTACATAACTTATTGAAGTAAACCTCCATTGCTCAAATCCAGCA
CCACACCAGATCAGCATCTCAAACTCTAGTAGGGTTCAACAGGGGCACGG
AACTTGGCACCAGCATAAACTGCTTCAGCACCGAGCTCTTCTTCAATTCT
CAGAAGCTGATTATACTTTGCAAGACGCTTCTGACCTGCATGGTGCTCC
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