CN184564

Overview
NameCN184564
Unique NameCN184564
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length439
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2438 contig Csv1_Contig2438:1..430. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN184564 vs. ExPASy Swiss-Prot
Match: 21KD_DAUCA (21 kDa protein OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 6.665e-16
Identity = 43/89 (48.31%), Postives = 58/89 (65.17%), Query Frame = 1
Query:  163 FIETSCKSTRYRTVCVQSLLPYAYKIQRSPLQMALEALSVSLSRTKSADSFVSNLVKHKDLKPREQQPIDDCLKLMGDSIDRLTKSVQE 429
            FI+TSC  T Y  VC QSL  YA  IQ +P ++A  AL VSL+RT+ A +F+  L K K LK R+   I DCL+ + DS+DR+++S  E
Sbjct:   28 FIKTSCTLTTYPAVCEQSLSAYAKTIQNNPQELASTALQVSLTRTQQAQTFMKRLNKFKGLKARQYAAIHDCLEEVEDSLDRVSRSCDE 116          
The following BLAST results are available for this feature:
BLAST of CN184564 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
21KD_DAUCA6.665e-1648.3121 kDa protein OS=Daucus carota PE=2 SV=1[more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_0005L09_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005L09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184564 ID=CN184564; Name=CN184564; organism=Citrus sinensis; type=EST; length=439bp
GAGGCTCAGTTCAAGAAAGAACAAACAGATTGCTATCTAAATCATAATAA
AATCATGGCAAGAATTGCCAATCTCTTGTTGGCACTCCCTGTTTTATGCA
TTATGGGCATGGCCAAAGCAGGCACAATCACTGAGCTACCTAGTCATAAT
GGTGACTCAATCTTCATTGAAACATCATGCAAATCCACCAGATATCGCAC
AGTCTGCGTGCAATCTCTCTTGCCTTACGCCTACAAAATCCAACGAAGCC
CGCTGCAGATGGCGCTGGAAGCCTTGTCCGTCAGCCTCTCCAGGACTAAG
TCCGCAGACTCATTTGTGTCAAATCTTGTAAAACACAAGGACTTGAAGCC
AAGGGAGCAACAACCAATTGACGACTGCCTGAAGTTGATGGGTGATTCGA
TTGACCGGCTTACCAAGTCGGTTCAAGAAACTGAAAGGA
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