CN184533
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184533 vs. ExPASy Swiss-Prot
Match: SCO1_BOVIN (Protein SCO1 homolog, mitochondrial OS=Bos taurus GN=SCO1 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 4.906e-19 Identity = 31/64 (48.44%), Postives = 44/64 (68.75%), Query Frame = 2 Query: 446 GHLNFINHDGKNVTEKDFLGKWTVIYFGFTHCPDICPDELQKLAAAVDKIKENSGI-DIVPAFI 634 G + H G+ T+KD+LG+W +IYFGFTHCPDICP+EL+K+ VD+I + ++ P FI Sbjct: 142 GPFSLTTHTGEPKTDKDYLGQWVLIYFGFTHCPDICPEELEKMIQVVDEIDSIPTLPNLTPLFI 205 HSP 2 Score: 40.817 bits (94), Expect = 4.906e-19 Identity = 23/77 (29.87%), Postives = 38/77 (49.35%), Query Frame = 1 Query: 238 SGDSNQSKSDTGKPIRGGPISWLSFLLLALTGAGII---WYYDKEKKQHIEEINSASQAVKQGPSVGKAAIGGPFKL 459 SG + D +P + GP+SW S + G ++ Y+ KEK + +E+ ++ S+GK +GGPF L Sbjct: 78 SGPEWKGSGDPMRPSKPGPVSWKSLAVTFAIGGALLAGMKYFKKEKTEKLEK--------ERHRSIGKPLLGGPFSL 146
BLAST of CN184533 vs. ExPASy Swiss-Prot
Match: SCO1_MOUSE (Protein SCO1 homolog, mitochondrial OS=Mus musculus GN=Sco1 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 4.018e-18 Identity = 30/64 (46.88%), Postives = 45/64 (70.31%), Query Frame = 2 Query: 446 GHLNFINHDGKNVTEKDFLGKWTVIYFGFTHCPDICPDELQKLAAAVDKIKENSGI-DIVPAFI 634 G + H+G+ T+KD+LG+W +IYFGFTHCPDICP+EL+K+ V++I + ++ P FI Sbjct: 121 GPFSLTTHNGEPKTDKDYLGQWVLIYFGFTHCPDICPEELEKMIEVVEEIDSIPSLPNLTPLFI 184 HSP 2 Score: 37.7354 bits (86), Expect = 4.018e-18 Identity = 26/85 (30.59%), Postives = 38/85 (44.71%), Query Frame = 1 Query: 214 PNSEGGDKSGDSNQSKSDTGKPIRGGPISWLSFLLLALTGAGII---WYYDKEKKQHIEEINSASQAVKQGPSVGKAAIGGPFKL 459 P G Q+ S KP GP+SW S L G ++ Y+ KEK + +E+ ++ S+GK +GGPF L Sbjct: 52 PPPPGAGPEPKGGQAGSHRPKP---GPVSWKSLALTFAIGGSLLAGMKYFKKEKIEKLEK--------QRHRSIGKPLLGGPFSL 125
BLAST of CN184533 vs. ExPASy Swiss-Prot
Match: SCO1_SCHPO (Protein sco1 OS=Schizosaccharomyces pombe GN=sco1 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.153e-13 Identity = 33/63 (52.38%), Postives = 44/63 (69.84%), Query Frame = 2 Query: 446 GHLNFINHDGKNVTEKDFLGKWTVIYFGFTHCPDICPDELQKLAAAVDKIKENSGIDIVPAFI 634 G + I+H G VT+ DF GK+++IYFGFT CPDICPDEL K++AA+D + G + P FI Sbjct: 99 GAFSLIDHHGNRVTDNDFKGKFSLIYFGFTRCPDICPDELDKMSAAIDIVNNVVGDVVYPIFI 161
BLAST of CN184533 vs. ExPASy Swiss-Prot
Match: SCO1_HUMAN (Protein SCO1 homolog, mitochondrial OS=Homo sapiens GN=SCO1 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.967e-13 Identity = 35/81 (43.21%), Postives = 52/81 (64.20%), Query Frame = 2 Query: 401 KQLNKDHQWE--KQPSAGHLNFINHDGKNVTEKDFLGKWTVIYFGFTHCPDICPDELQKLAAAVDKIKENSGI-DIVPAFI 634 ++L K+ Q K G + H G+ T+KD+LG+W +IYFGFTHCPD+CP+EL+K+ VD+I + + D+ P FI Sbjct: 121 EKLEKERQRHIGKPLLGGPFSLTTHTGERKTDKDYLGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFI 201
BLAST of CN184533 vs. ExPASy Swiss-Prot
Match: SCO2_DANRE (Protein SCO2 homolog, mitochondrial OS=Danio rerio GN=sco2 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 9.764e-13 Identity = 32/64 (50.00%), Postives = 45/64 (70.31%), Query Frame = 2 Query: 446 GHLNFINHDGKNVTEKDFLGKWTVIYFGFTHCPDICPDELQKLAAAVDKI-KENSGIDIVPAFI 634 G + ++H G+ T++DFLG W ++YFGFTHCPDICPDEL+KL + V + K+ S + P FI Sbjct: 114 GDFHLLDHTGQRRTKRDFLGHWVLLYFGFTHCPDICPDELEKLTSVVHILDKDPSLPSVQPLFI 177
BLAST of CN184533 vs. ExPASy Swiss-Prot
Match: SCO2_MOUSE (Protein SCO2 homolog, mitochondrial OS=Mus musculus GN=Sco2 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.266e-12 Identity = 30/64 (46.88%), Postives = 43/64 (67.19%), Query Frame = 2 Query: 446 GHLNFINHDGKNVTEKDFLGKWTVIYFGFTHCPDICPDELQKLAAAVDKIKENSGIDIV-PAFI 634 G + ++H G+ + DF G+W ++YFGFTHCPDICPDEL+KL V K++ + +V P FI Sbjct: 91 GDFSLLDHKGQPRCKADFRGQWVLMYFGFTHCPDICPDELEKLVQVVRKLEAEPDLPLVQPVFI 154
BLAST of CN184533 vs. ExPASy Swiss-Prot
Match: SCO2_HUMAN (Protein SCO2 homolog, mitochondrial OS=Homo sapiens GN=SCO2 PE=1 SV=3) HSP 1 Score: 69.707 bits (169), Expect = 1.410e-11 Identity = 29/64 (45.31%), Postives = 43/64 (67.19%), Query Frame = 2 Query: 446 GHLNFINHDGKNVTEKDFLGKWTVIYFGFTHCPDICPDELQKLAAAVDKIKENSGI-DIVPAFI 634 G + ++H G+ + DF G+W ++YFGFTHCPDICPDEL+KL V +++ G+ + P FI Sbjct: 102 GDFHLLDHRGRARCKADFRGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFI 165
BLAST of CN184533 vs. ExPASy Swiss-Prot
Match: SCO2_BOVIN (Protein SCO2 homolog, mitochondrial OS=Bos taurus GN=SCO2 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.841e-11 Identity = 29/64 (45.31%), Postives = 43/64 (67.19%), Query Frame = 2 Query: 446 GHLNFINHDGKNVTEKDFLGKWTVIYFGFTHCPDICPDELQKLAAAVDKIKENSGI-DIVPAFI 634 G + ++H G+ + DF G+W ++YFGFTHCPDICPDEL+KL V +++ G+ + P FI Sbjct: 102 GDFSLLDHRGRVRCKADFRGQWVLLYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPLFI 165
BLAST of CN184533 vs. ExPASy Swiss-Prot
Match: SCO1_YEAST (Protein SCO1, mitochondrial OS=Saccharomyces cerevisiae GN=SCO1 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.141e-11 Identity = 33/85 (38.82%), Postives = 49/85 (57.65%), Query Frame = 2 Query: 380 KR*IVLLKQLNKDHQWEKQPSAGHLNFINHDGKNVTEKDFLGKWTVIYFGFTHCPDICPDELQKLAAAVDKIKENSGIDIVPAFI 634 KR + K+ + + K G + + G TEK+ LGK+++IYFGF++CPDICPDEL KL ++ + GI + P FI Sbjct: 95 KRRLETQKEAEANRGYGKPSLGGPFHLEDMYGNEFTEKNLLGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFI 179
BLAST of CN184533 vs. ExPASy Swiss-Prot
Match: SCO2_YEAST (Protein SCO2, mitochondrial OS=Saccharomyces cerevisiae GN=SCO2 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.102e-11 Identity = 33/97 (34.02%), Postives = 55/97 (56.70%), Query Frame = 2 Query: 344 YGTMTRKRSNILKR*IVLLKQLNKDHQWEKQPSAGHLNFINHDGKNVTEKDFLGKWTVIYFGFTHCPDICPDELQKLAAAVDKIKENSGIDIVPAFI 634 Y ++RKR R + K+ + + + G N + +GK TE++ GK++++YFGF+HCPDICP+EL +L + ++ + I I P FI Sbjct: 94 YAYLSRKR-----RLLETEKEADANRAYGSVALGGPFNLTDFNGKPFTEENLKGKFSILYFGFSHCPDICPEELDRLTYWISELDDKDHIKIQPLFI 185 The following BLAST results are available for this feature:
BLAST of CN184533 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN184533 ID=CN184533; Name=CN184533; organism=Citrus sinensis; type=EST; length=636bpback to top |