CN184518

Overview
NameCN184518
Unique NameCN184518
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length539
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1532 contig Csv1_Contig1532:477..1014. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN184518 vs. ExPASy Swiss-Prot
Match: CYT12_ORYSJ (Cysteine proteinase inhibitor 12 OS=Oryza sativa subsp. japonica GN=Os01g0270100 PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 5.030e-48
Identity = 92/134 (68.66%), Postives = 112/134 (83.58%), Query Frame = 3
Query:    3 KRYEAKVWVKPWLNFKDLQEFKHVGDSPASFTSSDLGVKKDGHCPGWQAVPVHDPQVQDAANHAIQTIQQRSNSLFPYVLQEIVHAKAEVIEDFAKFAMLLKVKRGEKEEKLNVEVHKK-EGTFHLNQMQQDQE 401
            K YEAKVWVKPWL+FK+LQEF++ GD+  +FT++DLG KK GH PGW+ VPVHDP V+DAA+HA+++IQQRSNSLFPY L EIV AKAEV+EDFAKF +L+K+KRG KEEK   EVHK  EG F LNQMQQ+ +
Sbjct:  113 KVYEAKVWVKPWLDFKELQEFRNTGDA-TTFTNADLGAKKGGHEPGWRDVPVHDPVVKDAADHAVKSIQQRSNSLFPYELLEIVRAKAEVVEDFAKFDILMKLKRGNKEEKFKAEVHKNLEGAFVLNQMQQEHD 245          
BLAST of CN184518 vs. ExPASy Swiss-Prot
Match: CYT6_ARATH (Cysteine proteinase inhibitor 6 OS=Arabidopsis thaliana GN=CYS6 PE=1 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 9.189e-42
Identity = 86/134 (64.18%), Postives = 100/134 (74.63%), Query Frame = 3
Query:    3 KRYEAKVWVKPWLNFKDLQEFKHVGDSPASFTSSDLGVKKDGHCPGWQAVPVHDPQVQDAANHAIQTIQQRSNSLFPYVLQEIVHAKAEVIEDFAKFAMLLKVKRGEKEEKLNVEVHKK-EGTFHLNQMQQDQE 401
            K YEAKVWVKPWLNFK+LQEFK   D+PA  TSSDLG K+  H  GW+ VP  DP+V+  A  A++TIQQRSNSLFPY L E+VHAKAEV  + AK+ MLLK+KRGEKEEK  VEVHK  EG  HLN  +Q  +
Sbjct:  102 KLYEAKVWVKPWLNFKELQEFKPASDAPA-ITSSDLGCKQGEHESGWREVPGDDPEVKHVAEQAVKTIQQRSNSLFPYELLEVVHAKAEVTGEAAKYNMLLKLKRGEKEEKFKVEVHKNHEGALHLNHAEQHHD 234          
BLAST of CN184518 vs. ExPASy Swiss-Prot
Match: CYT7_ARATH (Cysteine proteinase inhibitor 7 OS=Arabidopsis thaliana GN=CYS7 PE=2 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 1.126e-31
Identity = 67/120 (55.83%), Postives = 92/120 (76.67%), Query Frame = 3
Query:    3 KRYEAKVWVKPWLNFKDLQEFKHVGDSPASFTSSDLGVKKDGHCPGWQAVPVHDPQVQDAANHAIQTIQQRSNSLFPYVLQEIVHAKAEVIEDFAKFAMLLKVKRGEKEEKLNVEVHKKE 362
            K YEAKVWVKPW+NFK LQEFK++     SFT SDLG K DG+   W++V  ++P+VQ+AA HA++++QQ+SNSLFPY L +I+ A+A+V+E+  KF +LLK++RG K EK  VEV K +
Sbjct:  111 KIYEAKVWVKPWMNFKQLQEFKNI---IPSFTISDLGFKPDGNGFDWRSVSTNNPEVQEAAKHAMKSLQQKSNSLFPYKLIDIILARAKVVEERVKFELLLKLERGNKLEKFMVEVMKDQ 227          
The following BLAST results are available for this feature:
BLAST of CN184518 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
CYT12_ORYSJ5.030e-4868.66Cysteine proteinase inhibitor 12 OS=Oryza sativa s... [more]
CYT6_ARATH9.189e-4264.18Cysteine proteinase inhibitor 6 OS=Arabidopsis tha... [more]
CYT7_ARATH1.126e-3155.83Cysteine proteinase inhibitor 7 OS=Arabidopsis tha... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_0005K08_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005K08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184518 ID=CN184518; Name=CN184518; organism=Citrus sinensis; type=EST; length=539bp
ATAAACGATATGAAGCGAAAGTGTGGGTCAAGCCATGGTTGAATTTTAAG
GATTTGCAGGAATTTAAGCACGTTGGTGATTCCCCGGCCTCTTTCACCTC
TTCAGATCTTGGTGTTAAGAAAGATGGTCATTGCCCTGGATGGCAGGCAG
TTCCCGTACATGATCCTCAAGTCCAGGATGCAGCCAATCATGCTATCCAA
ACCATTCAGCAAAGGTCCAACTCCCTCTTCCCTTATGTACTTCAGGAGAT
TGTTCATGCAAAAGCTGAGGTGATTGAGGATTTTGCGAAATTTGCCATGC
TTCTGAAAGTGAAGAGGGGAGAAAAAGAGGAGAAGCTCAATGTTGAAGTA
CACAAGAAGGAGGGCACATTCCATCTCAATCAAATGCAACAAGATCAAGA
GTGATTTTTGGAGATCATTGCTTGTGTTTTGTAGGGAAATTTATGCTTAT
ATCTTGTTCATGTTGGTAGTATTTCTGTTTATACATATCGGGAGCTGTAT
TTCTCTATCGCTACTGTTGTTCCATGTATCAGTTTCCCT
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