CN184513

Overview
NameCN184513
Unique NameCN184513
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length478
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6120 contig Csv1_Contig6120:172..649. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN184513 vs. ExPASy Swiss-Prot
Match: C98A2_SOYBN (Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 1.616e-38
Identity = 78/156 (50.00%), Postives = 99/156 (63.46%), Query Frame = 1
Query:   10 VLFLTIFFIFLSYKLYQXXXXXXXXXXXXXXXXXNLYHLKPVRYRLFAEWAQTYGPIMSVWFGSTLNVVISSSELAKQVLKENDQQXXXXXXXXXXXXXXXXGKDLIWADYGPHYVKVRKVSTXXXXXXXXXXXXXPIREDEVTAMVESIFRDCTN 477
            ++ +++  ++L Y LYQ                 NLY +KPVR+R FAEWAQ+YGPI+SVWFGSTLNV++S+SELAK+VLKE+DQ                 GKDLIWADYGPHYVKVRKV T             PIREDEVT+MV+S++  CT+
Sbjct:    6 IIPISLVTLWLGYTLYQRLRFKLPPGPRPWPVVGNLYDIKPVRFRCFAEWAQSYGPIISVWFGSTLNVIVSNSELAKEVLKEHDQLLADRHRSRSAAKFSRDGKDLIWADYGPHYVKVRKVCTLELFSPKRLEALRPIREDEVTSMVDSVYNHCTS 161          
BLAST of CN184513 vs. ExPASy Swiss-Prot
Match: C98A3_ARATH (Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CYP98A3 PE=1 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 5.199e-37
Identity = 78/144 (54.17%), Postives = 91/144 (63.19%), Query Frame = 1
Query:   40 LSYKLYQXXXXXXXXXXXXXXXXXNLYHLKPVRYRLFAEWAQTYGPIMSVWFGSTLNVVISSSELAKQVLKENDQQXXXXXXXXXXXXXXXXGKDLIWADYGPHYVKVRKVSTXXXXXXXXXXXXXPIREDEVTAMVESIFRDC 471
            +SYKL Q                 NLY +KPVR+R + EWAQ+YGPI+SVW GS LNVV+SS+ELAK+VLKE+DQ+                G+DLIWADYGPHYVKVRKV T             PIREDEVTAMVES+FRDC
Sbjct:   15 VSYKLIQRLRYKFPPGPSPKPIVGNLYDIKPVRFRCYYEWAQSYGPIISVWIGSILNVVVSSAELAKEVLKEHDQKLADRHRNRSTEAFSRNGQDLIWADYGPHYVKVRKVCTLELFTPKRLESLRPIREDEVTAMVESVFRDC 158          
BLAST of CN184513 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 2.260e-32
Identity = 67/121 (55.37%), Postives = 80/121 (66.12%), Query Frame = 1
Query:  112 NLYHLKPVRYRLFAEWAQTYGPIMSVWFGSTLNVVISSSELAKQVLKENDQQXXXXXXXXXXXXXXXXGKDLIWADYGPHYVKVRKVSTXXXXXXXXXXXXXPIREDEVTAMVESIFRDCT 474
            NL  +KP+R R F EWA+ YGP++SVWFGS L VV+S+SELAK+VLKENDQQ                G+DLIWADYGPHY+KVRK+               PIREDEVTAMVES++R  T
Sbjct:   43 NLRQIKPIRCRCFQEWAERYGPVISVWFGSGLTVVVSTSELAKEVLKENDQQLADRPRNRSTQRFSRNGQDLIWADYGPHYIKVRKLCNLELFTPKRLEALRPIREDEVTAMVESVYRAAT 163          
The following BLAST results are available for this feature:
BLAST of CN184513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
C98A2_SOYBN1.616e-3850.00Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=... [more]
C98A3_ARATH5.199e-3754.17Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CY... [more]
C98A1_SORBI2.260e-3255.37Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_0005K05_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005K05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184513 ID=CN184513; Name=CN184513; organism=Citrus sinensis; type=EST; length=478bp
GAGGTTCACGTTCTCTTCCTCACAATATTCTTCATCTTCCTGTCCTACAA
GCTTTACCAAAAGCTCAGACTGAAGCTACCACCAGGGCCACGGCCATGGC
CCGTCGTGGGAAACCTCTACCACTTAAAACCTGTCCGATATCGGTTGTTT
GCCGAGTGGGCTCAGACTTACGGGCCTATAATGTCCGTTTGGTTCGGTTC
CACTTTAAACGTCGTTATTTCGAGCTCGGAGTTGGCCAAGCAAGTTCTTA
AAGAAAATGATCAACAATTATCAAATAGGCGCAGAAGTAGAGCAGCTCTT
ACGCTTTCTAGAAATGGAAAAGACCTTATTTGGGCTGACTATGGTCCTCA
TTATGTGAAGGTTAGAAAAGTTTCTACTCTTGAGCTTCTGTCTTCCAAAA
AGCTTGAGGCCCTTAAGCCAATTAGGGAAGATGAAGTCACTGCCATGGTT
GAATCCATCTTTAGAGACTGCACTAACC
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