CN184511

Overview
NameCN184511
Unique NameCN184511
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length721
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CN184511_ssr306 microsatellite CN184511_ssr306:306..315. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig2429 contig Csv1_Contig2429:1..722. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN184511 vs. ExPASy Swiss-Prot
Match: C82A4_SOYBN (Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.933e-40
Identity = 74/130 (56.92%), Postives = 93/130 (71.54%), Query Frame = -1
Query:  329 ESREECTVNGYHVPAGTQLFINVWKIQRDASVWEEPSKFQPERFLTRHKDIDVKGQNFELLPFGSGRRMCPGVSFALQVMQFTLASLLQGFDFATPSNEPVDMGERLGLTMEKSQPFEVLVTPRLSAAFY 718
            E  E+CT+ GYHV  GT+L  N+WKI  D +VW +P +F+P+RFLT HKDIDVKG +F+LLPFGSGRR+CPG+SF LQ +   LAS L  F+   PS EP+DM E  G+T  K+ P EVLV P LS + Y
Sbjct:  393 EFAEDCTLGGYHVKKGTRLITNIWKIHTDPNVWSDPFEFKPDRFLTTHKDIDVKGHHFQLLPFGSGRRVCPGISFGLQTVHLALASFLHSFEILNPSTEPLDMTEAFGVTNTKATPLEVLVKPCLSPSCY 522          
BLAST of CN184511 vs. ExPASy Swiss-Prot
Match: C82A3_SOYBN (Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.545e-39
Identity = 74/130 (56.92%), Postives = 92/130 (70.77%), Query Frame = -1
Query:  329 ESREECTVNGYHVPAGTQLFINVWKIQRDASVWEEPSKFQPERFLTRHKDIDVKGQNFELLPFGSGRRMCPGVSFALQVMQFTLASLLQGFDFATPSNEPVDMGERLGLTMEKSQPFEVLVTPRLSAAFY 718
            E  E C + GYH+  GT+L  N+WKI RD SVW +P +F+PERFLT HKD+D++G NFELLPFGSGRR+C G+S  L ++ FTLA+LL  FD   PS EPVDM E  G T  K+ P E+LV PR S  +Y
Sbjct:  395 EFTENCILGGYHIKKGTRLIHNLWKIHRDPSVWSDPLEFKPERFLTTHKDVDLRGHNFELLPFGSGRRVCAGMSLGLNMVHFTLANLLHSFDILNPSAEPVDMTEFFGFTNTKATPLEILVKPRQSPNYY 524          
BLAST of CN184511 vs. ExPASy Swiss-Prot
Match: C82A1_PEA (Cytochrome P450 82A1 (Fragment) OS=Pisum sativum GN=CYP82A1 PE=2 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 2.087e-36
Identity = 70/130 (53.85%), Postives = 90/130 (69.23%), Query Frame = -1
Query:  329 ESREECTVNGYHVPAGTQLFINVWKIQRDASVWEEPSKFQPERFLTRHKDIDVKGQNFELLPFGSGRRMCPGVSFALQVMQFTLASLLQGFDFATPSNEPVDMGERLGLTMEKSQPFEVLVTPRLSAAFY 718
            E  E+CT+ GYH+  GT+L  N+WKI RD SVW +P +F+PERFL+ HKD+DV+GQNFELLPFGSGRRMC G+S  L ++ + LA+ L  F+   PS E +D+ E L     K+ P EVLV P LS   Y
Sbjct:  412 EFTEDCTIGGYHIKKGTRLMPNLWKIHRDPSVWPDPLEFKPERFLSTHKDVDVRGQNFELLPFGSGRRMCAGMSLGLHMVHYILANFLHSFEILNPSPESIDVTEVLEFVTTKATPLEVLVKPCLSFKCY 541          
BLAST of CN184511 vs. ExPASy Swiss-Prot
Match: C82A2_SOYBN (Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.715e-35
Identity = 68/130 (52.31%), Postives = 89/130 (68.46%), Query Frame = -1
Query:  329 ESREECTVNGYHVPAGTQLFINVWKIQRDASVWEEPSKFQPERFLTRHKDIDVKGQNFELLPFGSGRRMCPGVSFALQVMQFTLASLLQGFDFATPSNEPVDMGERLGLTMEKSQPFEVLVTPRLSAAFY 718
            E  E+CT+ GY V  GT+L  N+ KI  D +VW  P +F+PERFLT  KDID+KGQ+F+LLPFG GRR+CPG++  LQ ++ TLAS L  F+   PS EP+DM E    T  K+ P E+L+ PRLS + Y
Sbjct:  390 EFEEDCTIGGYTVKKGTRLITNLSKIHTDHNVWSNPLEFKPERFLTTDKDIDMKGQHFQLLPFGGGRRICPGINLGLQTVRLTLASFLHSFEILNPSTEPLDMTEVFRATNTKATPLEILIKPRLSPSCY 519          
BLAST of CN184511 vs. ExPASy Swiss-Prot
Match: F3PH_ARATH (Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana GN=CYP75B1 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.228e-29
Identity = 63/139 (45.32%), Postives = 88/139 (63.31%), Query Frame = -1
Query:  326 HESREECTVNGYHVPAGTQLFINVWKIQRDASVWEEPSKFQPERFLT--RHKDIDVKGQNFELLPFGSGRRMCPGVSFALQVMQFTLASLLQGFDF-----ATPSNEPVDMGERLGLTMEKSQPFEVLVTPRLSAAFYG 721
            H + E C +NGYH+P G+ L  N+W I RD   W +P  F+PERFL       +DVKG +FEL+PFG+GRR+C G+S  L+ +QF  A+L+QGFD+      TP  E ++M E  GLT++++ P  V   PRL+   YG
Sbjct:  373 HIASESCEINGYHIPKGSTLLTNIWAIARDPDQWSDPLAFKPERFLPGGEKSGVDVKGSDFELIPFGAGRRICAGLSLGLRTIQFLTATLVQGFDWELAGGVTP--EKLNMEESYGLTLQRAVPLVVHPKPRLAPNVYG 509          
BLAST of CN184511 vs. ExPASy Swiss-Prot
Match: C76C3_ARATH (Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CYP76C3 PE=2 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 7.191e-29
Identity = 64/120 (53.33%), Postives = 82/120 (68.33%), Query Frame = -1
Query:  374 ESREECTVNGYHVPAGTQLFINVWKIQRDASVWEEPSKFQPERFLTRHKDIDVKGQNFELLPFGSGRRMCPGVSFALQVMQFTLASLLQGFDF-----ATPSNEPVDMGERLGLTMEKSQ 718
            +S  +  + G+ VP  TQ+ +NVW I RDASVWE P KF+PERFL R  + DVKG++FEL+PFGSGRRMCPG+S AL+ M   LASLL  FD+       P N  +DM E  GLT+ K++
Sbjct:  384 KSESDVQIMGFLVPKNTQVVVNVWAIGRDASVWENPMKFEPERFLLR--ETDVKGRDFELIPFGSGRRMCPGISMALKTMHMVLASLLYSFDWKLQNGVVPGN--IDMSETFGLTLHKAK 499          
BLAST of CN184511 vs. ExPASy Swiss-Prot
Match: C75A1_PETHY (Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida GN=CYP75A1 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.602e-28
Identity = 58/131 (44.27%), Postives = 86/131 (65.65%), Query Frame = -1
Query:  329 SREECTVNGYHVPAGTQLFINVWKIQRDASVWEEPSKFQPERFLT-RHKDIDVKGQNFELLPFGSGRRMCPGVSFALQVMQFTLASLLQGFDFATPSNE-PVDMGERLGLTMEKSQPFEVLVTPRLSAAFY 715
            S E C V+GY++P  T+L +N+W I RD  VWE P +F PERFL+ R+  ID +G +FEL+PFG+GRR+C G    + ++++ L +L+  FD+  PS    ++M E  GL ++K+ P E +VTPRL    Y
Sbjct:  374 SNEPCIVDGYYIPKNTRLSVNIWAIGRDPQVWENPLEFNPERFLSGRNSKIDPRGNDFELIPFGAGRRICAGTRMGIVMVEYILGTLVHSFDWKLPSEVIELNMEEAFGLALQKAVPLEAMVTPRLQLDVY 504          
BLAST of CN184511 vs. ExPASy Swiss-Prot
Match: C75A3_PETHY (Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida GN=CYP75A3 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.733e-28
Identity = 58/131 (44.27%), Postives = 86/131 (65.65%), Query Frame = -1
Query:  329 SREECTVNGYHVPAGTQLFINVWKIQRDASVWEEPSKFQPERFLT-RHKDIDVKGQNFELLPFGSGRRMCPGVSFALQVMQFTLASLLQGFDFATPSNE-PVDMGERLGLTMEKSQPFEVLVTPRLSAAFY 715
            S E C V+GY++P  T+L +N+W I RD  VWE P +F PERFL+ R+  ID +G +FEL+PFG+GRR+C G    + ++++ L +L+  FD+  PS    ++M E  GL ++K+ P E +VTPRL    Y
Sbjct:  374 SNEPCIVDGYYIPKNTRLSVNIWAIGRDPEVWENPLEFYPERFLSGRNSKIDPRGNDFELIPFGAGRRICAGTRMGIVMVEYILGTLVHSFDWKLPSEVIELNMEEAFGLALQKAVPLEAMVTPRLPIDVY 504          
BLAST of CN184511 vs. ExPASy Swiss-Prot
Match: C71A2_SOLME (Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71A2 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.733e-28
Identity = 65/127 (51.18%), Postives = 82/127 (64.57%), Query Frame = -1
Query:  350 ESREECTVNGY-HVPAGTQLFINVWKIQRDASVWEEPSKFQPERFLTRHKDIDVKGQNFELLPFGSGRRMCPGVSFALQVMQFTLASLLQGFDFATPSN---EPVDMGERLGLTMEKSQPFEVLVTP 718
            ES E+  + GY H+PA TQ  IN W I RD   WE P ++QPERFL  + D DVKG NF+LLPFG+GRR CPG SFA+ V++  LA L+  FDFA P     E +DM E +G+T  +  P  V+ TP
Sbjct:  380 ESMEDVNLLGYYHIPARTQAIINAWAIGRDPLSWENPEEYQPERFL--NSDADVKGLNFKLLPFGAGRRGCPGSSFAIAVIELALARLVHKFDFALPEGIKPEDLDMTETIGITTRRKLPLLVVATP 504          
BLAST of CN184511 vs. ExPASy Swiss-Prot
Match: C75A2_SOLME (Flavonoid 3',5'-hydroxylase OS=Solanum melongena GN=CYP75A2 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 7.951e-28
Identity = 55/131 (41.98%), Postives = 89/131 (67.94%), Query Frame = -1
Query:  329 SREECTVNGYHVPAGTQLFINVWKIQRDASVWEEPSKFQPERFLT-RHKDIDVKGQNFELLPFGSGRRMCPGVSFALQVMQFTLASLLQGFDFATPSN-EPVDMGERLGLTMEKSQPFEVLVTPRLSAAFY 715
            S + CT++GY++P  T+L +N+W I RD  VWE P +F PERFL+ ++  I+ +G +FEL+PFG+GRR+C G    + ++++ L +L+  FD+  P++   ++M E  GL ++K+ P E +VTPRLS   Y
Sbjct:  377 SSDACTIDGYYIPKNTRLSVNIWAIGRDPDVWENPLEFIPERFLSEKNAKIEHRGNDFELIPFGAGRRICAGTRMGIVMVEYILGTLIHSFDWKLPNDVVDINMEETFGLALQKAVPLEAIVTPRLSFDIY 507          
The following BLAST results are available for this feature:
BLAST of CN184511 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 245
Match NameE-valueIdentityDescription
C82A4_SOYBN6.933e-4056.92Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=... [more]
C82A3_SOYBN1.545e-3956.92Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=... [more]
C82A1_PEA2.087e-3653.85Cytochrome P450 82A1 (Fragment) OS=Pisum sativum G... [more]
C82A2_SOYBN6.715e-3552.31Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=... [more]
F3PH_ARATH3.228e-2945.32Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana... [more]
C76C3_ARATH7.191e-2953.33Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CY... [more]
C75A1_PETHY1.602e-2844.27Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida G... [more]
C75A3_PETHY2.733e-2844.27Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida G... [more]
C71A2_SOLME2.733e-2851.18Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71... [more]
C75A2_SOLME7.951e-2841.98Flavonoid 3',5'-hydroxylase OS=Solanum melongena G... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_0005K04_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005K04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184511 ID=CN184511; Name=CN184511; organism=Citrus sinensis; type=EST; length=721bp
CAAAGGATGGTTTTATTACTGGAAGAGAGAATACAAGGTTTCATCCAAGT
ATTCTTACTACAACTCTATATTATAAGACTCCAGGACTCAATGATCCAAC
ACACTCTTAGGGAATTCCTTTTATAGGCACTAAAGGAATCTCCTTTTATT
ATTTCAATCATTACATCTTATCTATAGGGAATCTACTTTATGACTCATCA
CTTCTTTATATTGCATCACACAGTACATCCTTATCTCTAAGGAATTGACT
TTACAACTCACTACATGTGACACCACACACTTGTTACTTATTTATTGTTC
AATCCATATATATATAATCAATTTAACCATAGAAGGCAGCAGAAAGACGT
GGAGTAACAAGTACTTCAAATGGTTGAGATTTCTCCATGGTCAACCCTAA
TCTTTCACCCATGTCCACCGGTTCATTAGATGGGGTTGCAAAATCAAATC
CCTGAAGTAGAGAAGCAAGTGTAAATTGCATAACTTGGAGGGCAAATGAC
ACTCCAGGACACATTCTTCTACCACTACCAAAAGGTAACAATTCAAAATT
TTGTCCCTTAACATCAATATCCTTGTGCCTTGTCAAAAATCTTTCTGGCT
GAAACTTAGATGGCTCTTCCCAGACACTTGCATCACGTTGAATTTTCCAT
ACATTGATAAAAAGTTGTGTGCCAGCAGGGACATGGTAACCATTAACTGT
GCACTCTTCCCTAGACTCATG
back to top