CN184500
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184500 vs. ExPASy Swiss-Prot
Match: CSN4_ARATH (COP9 signalosome complex subunit 4 OS=Arabidopsis thaliana GN=CSN4 PE=1 SV=2) HSP 1 Score: 159.844 bits (403), Expect = 5.341e-39 Identity = 79/95 (83.16%), Postives = 85/95 (89.47%), Query Frame = -3 Query: 188 MIEHNLLSASKLYTNISFEELGTLLGIAPQKAEKIASRMIFEDRMRGSIDQVEAVIHFEDDTEELQQWDQQIVGLCQALNDILDSMAKKGLPIPV 472 MIEHNLLSASKLYTNI F+ELGTLL I P+KAEKIA+ MI +DRMRGSIDQ EAVIHFEDD EELQQWDQQI GLCQALNDILD MAKKG+ +PV Sbjct: 303 MIEHNLLSASKLYTNIRFDELGTLLAIDPRKAEKIAANMIGQDRMRGSIDQEEAVIHFEDDVEELQQWDQQISGLCQALNDILDGMAKKGMSVPV 397
BLAST of CN184500 vs. ExPASy Swiss-Prot
Match: CSN4_DICDI (COP9 signalosome complex subunit 4 OS=Dictyostelium discoideum GN=csn4 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.081e-23 Identity = 51/88 (57.95%), Postives = 73/88 (82.95%), Query Frame = -3 Query: 209 MIEHNLLSASKLYTNISFEELGTLLGIAPQKAEKIASRMIFEDRMRGSIDQVEAVIHFEDDTEELQQWDQQIVGLCQALNDILDSMAK 472 +IEHNLLSASKLY NI+F+ELG+LL I +KAEK+AS+M+ E+R+ GSIDQ+E +I FE+ + L QWD++I GLC +N+I++S++K Sbjct: 300 VIEHNLLSASKLYNNITFDELGSLLEIQAEKAEKVASKMVCEERLIGSIDQIERLIQFENVGDSLTQWDKKIEGLCIHMNNIIESISK 387
BLAST of CN184500 vs. ExPASy Swiss-Prot
Match: CSN4_DANRE (COP9 signalosome complex subunit 4 OS=Danio rerio GN=cops4 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 2.663e-22 Identity = 52/88 (59.09%), Postives = 67/88 (76.14%), Query Frame = -3 Query: 209 MIEHNLLSASKLYTNISFEELGTLLGIAPQKAEKIASRMIFEDRMRGSIDQVEAVIHFEDDTEELQQWDQQIVGLCQALNDILDSMAK 472 +IEHNLLSASKLY NI+FEELG LL I P KAEKIAS+MI E RM G IDQ++ ++HFE E L WD+QI LC +N++L+ +++ Sbjct: 304 VIEHNLLSASKLYNNITFEELGALLEIPPAKAEKIASQMITEGRMNGFIDQIDGIVHFE-TREPLPTWDKQIQSLCFQVNNLLEKISQ 390
BLAST of CN184500 vs. ExPASy Swiss-Prot
Match: CSN4_DROME (COP9 signalosome complex subunit 4 OS=Drosophila melanogaster GN=CSN4 PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 5.933e-22 Identity = 52/87 (59.77%), Postives = 65/87 (74.71%), Query Frame = -3 Query: 212 MIEHNLLSASKLYTNISFEELGTLLGIAPQKAEKIASRMIFEDRMRGSIDQVEAVIHFEDDTEELQQWDQQIVGLCQALNDILDSMA 472 + EHNLLSASKLY NI+FEELG LL I KAEKIAS+MI E RM G IDQ+ A++HFE + E L QWD+QI LC +N I++ ++ Sbjct: 311 VFEHNLLSASKLYNNITFEELGALLDIPAVKAEKIASQMITEGRMNGHIDQISAIVHFE-NRELLPQWDRQIQSLCYQVNSIIEKIS 396
BLAST of CN184500 vs. ExPASy Swiss-Prot
Match: CSN4_RAT (COP9 signalosome complex subunit 4 OS=Rattus norvegicus GN=Cops4 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 2.254e-21 Identity = 51/88 (57.95%), Postives = 66/88 (75.00%), Query Frame = -3 Query: 209 MIEHNLLSASKLYTNISFEELGTLLGIAPQKAEKIASRMIFEDRMRGSIDQVEAVIHFEDDTEELQQWDQQIVGLCQALNDILDSMAK 472 +IEHNLLSASKLY NI+FEELG LL I KAEKIAS+MI E RM G IDQ++ ++HFE E L WD+QI LC +N++L+ +++ Sbjct: 304 VIEHNLLSASKLYNNITFEELGALLEIPAAKAEKIASQMITEGRMNGFIDQIDGIVHFE-TREALPTWDKQIQSLCFQVNNLLEKISQ 390
BLAST of CN184500 vs. ExPASy Swiss-Prot
Match: CSN4_PONAB (COP9 signalosome complex subunit 4 OS=Pongo abelii GN=COPS4 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 2.254e-21 Identity = 51/88 (57.95%), Postives = 66/88 (75.00%), Query Frame = -3 Query: 209 MIEHNLLSASKLYTNISFEELGTLLGIAPQKAEKIASRMIFEDRMRGSIDQVEAVIHFEDDTEELQQWDQQIVGLCQALNDILDSMAK 472 +IEHNLLSASKLY NI+FEELG LL I KAEKIAS+MI E RM G IDQ++ ++HFE E L WD+QI LC +N++L+ +++ Sbjct: 304 VIEHNLLSASKLYNNITFEELGALLEIPAAKAEKIASQMITEGRMNGFIDQIDGIVHFE-TREALPTWDKQIQSLCFQVNNLLEKISQ 390
BLAST of CN184500 vs. ExPASy Swiss-Prot
Match: CSN4_PIG (COP9 signalosome complex subunit 4 OS=Sus scrofa GN=COPS4 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 2.254e-21 Identity = 51/88 (57.95%), Postives = 66/88 (75.00%), Query Frame = -3 Query: 209 MIEHNLLSASKLYTNISFEELGTLLGIAPQKAEKIASRMIFEDRMRGSIDQVEAVIHFEDDTEELQQWDQQIVGLCQALNDILDSMAK 472 +IEHNLLSASKLY NI+FEELG LL I KAEKIAS+MI E RM G IDQ++ ++HFE E L WD+QI LC +N++L+ +++ Sbjct: 304 VIEHNLLSASKLYNNITFEELGALLEIPAAKAEKIASQMITEGRMNGFIDQIDGIVHFE-TREALPTWDKQIQSLCFQVNNLLEKISQ 390
BLAST of CN184500 vs. ExPASy Swiss-Prot
Match: CSN4_MOUSE (COP9 signalosome complex subunit 4 OS=Mus musculus GN=Cops4 PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 2.254e-21 Identity = 51/88 (57.95%), Postives = 66/88 (75.00%), Query Frame = -3 Query: 209 MIEHNLLSASKLYTNISFEELGTLLGIAPQKAEKIASRMIFEDRMRGSIDQVEAVIHFEDDTEELQQWDQQIVGLCQALNDILDSMAK 472 +IEHNLLSASKLY NI+FEELG LL I KAEKIAS+MI E RM G IDQ++ ++HFE E L WD+QI LC +N++L+ +++ Sbjct: 304 VIEHNLLSASKLYNNITFEELGALLEIPAAKAEKIASQMITEGRMNGFIDQIDGIVHFE-TREALPTWDKQIQSLCFQVNNLLEKISQ 390
BLAST of CN184500 vs. ExPASy Swiss-Prot
Match: CSN4_MACFA (COP9 signalosome complex subunit 4 OS=Macaca fascicularis GN=COPS4 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 2.254e-21 Identity = 51/88 (57.95%), Postives = 66/88 (75.00%), Query Frame = -3 Query: 209 MIEHNLLSASKLYTNISFEELGTLLGIAPQKAEKIASRMIFEDRMRGSIDQVEAVIHFEDDTEELQQWDQQIVGLCQALNDILDSMAK 472 +IEHNLLSASKLY NI+FEELG LL I KAEKIAS+MI E RM G IDQ++ ++HFE E L WD+QI LC +N++L+ +++ Sbjct: 304 VIEHNLLSASKLYNNITFEELGALLEIPAAKAEKIASQMITEGRMNGFIDQIDGIVHFE-TREALPTWDKQIQSLCFQVNNLLEKISQ 390
BLAST of CN184500 vs. ExPASy Swiss-Prot
Match: CSN4_HUMAN (COP9 signalosome complex subunit 4 OS=Homo sapiens GN=COPS4 PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 2.254e-21 Identity = 51/88 (57.95%), Postives = 66/88 (75.00%), Query Frame = -3 Query: 209 MIEHNLLSASKLYTNISFEELGTLLGIAPQKAEKIASRMIFEDRMRGSIDQVEAVIHFEDDTEELQQWDQQIVGLCQALNDILDSMAK 472 +IEHNLLSASKLY NI+FEELG LL I KAEKIAS+MI E RM G IDQ++ ++HFE E L WD+QI LC +N++L+ +++ Sbjct: 304 VIEHNLLSASKLYNNITFEELGALLEIPAAKAEKIASQMITEGRMNGFIDQIDGIVHFE-TREALPTWDKQIQSLCFQVNNLLEKISQ 390 The following BLAST results are available for this feature:
BLAST of CN184500 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184500 ID=CN184500; Name=CN184500; organism=Citrus sinensis; type=EST; length=474bpback to top |