CN184492
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184492 vs. ExPASy Swiss-Prot
Match: GASA1_ARATH (Gibberellin-regulated protein 1 OS=Arabidopsis thaliana GN=GASA1 PE=1 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 4.768e-22 Identity = 45/76 (59.21%), Postives = 54/76 (71.05%), Query Frame = 1 Query: 175 SDVLDIHKKH-HPQKINCSQACNRRCKESSRKNMCHRACRTCCKRCHCVPPGTYGNKQACPCYASLRTHGNRPKCP 399 +DV + KK+ + +KI+C AC RC+ S R +CHRAC TCC RC+CVPPGTYGN C CYASL THG R KCP Sbjct: 23 ADVENSQKKNGYAKKIDCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCYASLTTHGGRRKCP 98
BLAST of CN184492 vs. ExPASy Swiss-Prot
Match: SNAK2_SOLTU (Snakin-2 OS=Solanum tuberosum GN=SN2 PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.062e-21 Identity = 41/63 (65.08%), Postives = 49/63 (77.78%), Query Frame = 1 Query: 211 QKINCSQACNRRCKESSRKNMCHRACRTCCKRCHCVPPGTYGNKQACPCYASLRTHGNRPKCP 399 +KI+C AC RC+ SSR +C+RAC TCC RC+CVPPGT GN + CPCYASL THGN+ KCP Sbjct: 42 KKIDCGGACAARCRLSSRPRLCNRACGTCCARCNCVPPGTSGNTETCPCYASLTTHGNKRKCP 104
BLAST of CN184492 vs. ExPASy Swiss-Prot
Match: GASA2_ARATH (Gibberellin-regulated protein 2 OS=Arabidopsis thaliana GN=GASA2 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 9.941e-20 Identity = 38/62 (61.29%), Postives = 44/62 (70.97%), Query Frame = 1 Query: 214 KINCSQACNRRCKESSRKNMCHRACRTCCKRCHCVPPGTYGNKQACPCYASLRTHGNRPKCP 399 KI+C C RC +SSR +C RAC +CC RC+CVPPGT GN CPCYAS+ THG R KCP Sbjct: 38 KIDCGGRCKDRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHLCPCYASITTHGGRLKCP 99
BLAST of CN184492 vs. ExPASy Swiss-Prot
Match: GASA3_ARATH (Gibberellin-regulated protein 3 OS=Arabidopsis thaliana GN=GASA3 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.893e-19 Identity = 38/62 (61.29%), Postives = 44/62 (70.97%), Query Frame = 1 Query: 214 KINCSQACNRRCKESSRKNMCHRACRTCCKRCHCVPPGTYGNKQACPCYASLRTHGNRPKCP 399 KI+C C RC +SSR N+C RAC +CC RC+CVPPGT GN CPCYAS+ T G R KCP Sbjct: 38 KIDCGGRCKGRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLCPCYASITTRGGRLKCP 99
BLAST of CN184492 vs. ExPASy Swiss-Prot
Match: GAST1_SOLLC (Protein GAST1 OS=Solanum lycopersicum GN=GAST1 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 5.645e-15 Identity = 33/65 (50.77%), Postives = 41/65 (63.08%), Query Frame = 1 Query: 205 HPQKINCSQACNRRCKESSRKNMCHRACRTCCKRCHCVPPGTYGNKQACPCYASLRTHGNRPKCP 399 HPQ +C C RC ++S K C C+ CC +C CVP GTYGNKQ+CPCY + +T PKCP Sbjct: 50 HPQ--DCQPKCTYRCSKTSYKKPCMFFCQKCCAKCLCVPAGTYGNKQSCPCYNNWKTKRGGPKCP 112
BLAST of CN184492 vs. ExPASy Swiss-Prot
Match: RSI1_SOLLC (Protein RSI-1 OS=Solanum lycopersicum GN=RSI-1 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.145e-14 Identity = 33/75 (44.00%), Postives = 44/75 (58.67%), Query Frame = 1 Query: 175 SDVLDIHKKHHPQKINCSQACNRRCKESSRKNMCHRACRTCCKRCHCVPPGTYGNKQACPCYASLRTHGNRPKCP 399 S+V++ + K P +C C RC +S K C C+ CC C CVP G YGNKQ+CPCY + +T +PKCP Sbjct: 24 SNVVEGYNKLRPT--DCKPRCTYRCSATSHKKPCMFFCQKCCATCLCVPKGVYGNKQSCPCYNNWKTQEGKPKCP 96
BLAST of CN184492 vs. ExPASy Swiss-Prot
Match: GASA4_ARATH (Gibberellin-regulated protein 4 OS=Arabidopsis thaliana GN=GASA4 PE=1 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 2.145e-14 Identity = 33/78 (42.31%), Postives = 45/78 (57.69%), Query Frame = 1 Query: 175 SDVLDIHKKHHP---QKINCSQACNRRCKESSRKNMCHRACRTCCKRCHCVPPGTYGNKQACPCYASLRTHGNRPKCP 399 S+V K++ P ++ C C+RRCK++ C C CC++C CVPPG YGNKQ C CY + +T PKCP Sbjct: 29 SNVKWSQKRYGPGSLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEGGPKCP 106
BLAST of CN184492 vs. ExPASy Swiss-Prot
Match: SNAK1_SOLTU (Snakin-1 OS=Solanum tuberosum GN=SN1 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 9.965e-12 Identity = 25/59 (42.37%), Postives = 32/59 (54.24%), Query Frame = 1 Query: 223 CSQACNRRCKESSRKNMCHRACRTCCKRCHCVPPGTYGNKQACPCYASLRTHGNRPKCP 399 C C RC ++ + C + C CC+ C CVP GTYGNK CPCY + + KCP Sbjct: 30 CDSKCKLRCSKAGLADRCLKYCGICCEECKCVPSGTYGNKHECPCYRDKKNSKGKSKCP 88 The following BLAST results are available for this feature:
BLAST of CN184492 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN184492 ID=CN184492; Name=CN184492; organism=Citrus sinensis; type=EST; length=608bpback to top |