CN184484
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN184484 vs. ExPASy Swiss-Prot
Match: MT3_CARPA (Metallothionein-like protein type 3 OS=Carica papaya PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 1.400e-18 Identity = 27/38 (71.05%), Postives = 33/38 (86.84%), Query Frame = 3 Query: 66 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTV 179 MSDTCGNCDCAD++QCVKKGSSY AD +ET+ S ++ V Sbjct: 1 MSDTCGNCDCADKTQCVKKGSSYTADIIETEKSIMTVV 38 HSP 2 Score: 46.2098 bits (108), Expect = 1.400e-18 Identity = 17/25 (68.00%), Postives = 20/25 (80.00%), Query Frame = 1 Query: 181 VVMDVQAAEAEGNCKCGPTCACVNC 255 VVMD AAE +G CKCGP+C+C NC Sbjct: 37 VVMDAPAAENDGKCKCGPSCSCTNC 61
BLAST of CN184484 vs. ExPASy Swiss-Prot
Match: MT3_ACTDE (Metallothionein-like protein type 3 OS=Actinidia deliciosa GN=pKIWI503 PE=2 SV=1) HSP 1 Score: 56.225 bits (134), Expect = 1.786e-14 Identity = 26/38 (68.42%), Postives = 29/38 (76.32%), Query Frame = 3 Query: 66 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTV 179 MSD CGNCDCAD SQCVKKG+S D VETD S++ V Sbjct: 1 MSDKCGNCDCADSSQCVKKGNS--IDIVETDKSYIEDV 36 HSP 2 Score: 42.3578 bits (98), Expect = 1.786e-14 Identity = 17/25 (68.00%), Postives = 19/25 (76.00%), Query Frame = 1 Query: 181 VVMDVQAAEAEGNCKCGPTCACVNC 255 VVM V AAE+ G CKCG +C CVNC Sbjct: 36 VVMGVPAAESGGKCKCGTSCPCVNC 60
BLAST of CN184484 vs. ExPASy Swiss-Prot
Match: MT3_MUSAC (Metallothionein-like protein type 3 OS=Musa acuminata PE=3 SV=1) HSP 1 Score: 58.9214 bits (141), Expect = 5.097e-14 Identity = 24/35 (68.57%), Postives = 28/35 (80.00%), Query Frame = 3 Query: 75 TCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTV 179 TCGNCDC D+SQCVKKG+SY D VET+ S+V V Sbjct: 3 TCGNCDCVDKSQCVKKGNSYGIDIVETEKSYVDEV 37 HSP 2 Score: 38.1206 bits (87), Expect = 5.097e-14 Identity = 13/25 (52.00%), Postives = 18/25 (72.00%), Query Frame = 1 Query: 181 VVMDVQAAEAEGNCKCGPTCACVNC 255 V++ +AAE +G CKCG CAC +C Sbjct: 37 VIVAAEAAEHDGKCKCGAACACTDC 61
BLAST of CN184484 vs. ExPASy Swiss-Prot
Match: MT3_PRUAV (Metallothionein-like protein 1 OS=Prunus avium GN=MT1 PE=3 SV=1) HSP 1 Score: 47.3654 bits (111), Expect = 9.099e-13 Identity = 18/25 (72.00%), Postives = 21/25 (84.00%), Query Frame = 1 Query: 181 VVMDVQAAEAEGNCKCGPTCACVNC 255 V+MD AAE GNCKCGP+CACV+C Sbjct: 38 VIMDAPAAENGGNCKCGPSCACVDC 62 HSP 2 Score: 45.4394 bits (106), Expect = 9.099e-13 Identity = 20/38 (52.63%), Postives = 24/38 (63.16%), Query Frame = 3 Query: 66 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTV 179 MS C NCDC+D SQC KKG S+ VET+ + TV Sbjct: 1 MSSKCSNCDCSDSSQCTKKGYSFDLVIVETENRSMDTV 38
BLAST of CN184484 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSJ (Metallothionein-like protein 3A OS=Oryza sativa subsp. japonica GN=MT3A PE=2 SV=1) HSP 1 Score: 55.4546 bits (132), Expect = 7.386e-12 Identity = 24/38 (63.16%), Postives = 27/38 (71.05%), Query Frame = 3 Query: 66 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTV 179 MSD CGNCDCAD+SQCVKKG+SY VE + S V Sbjct: 1 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSHFEEV 38 HSP 2 Score: 34.2686 bits (77), Expect = 7.386e-12 Identity = 11/22 (50.00%), Postives = 15/22 (68.18%), Query Frame = 1 Query: 190 DVQAAEAEGNCKCGPTCACVNC 255 +V A E G CKCG +C+C +C Sbjct: 37 EVAAGEENGGCKCGTSCSCTDC 58
BLAST of CN184484 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSI (Metallothionein-like protein 3A OS=Oryza sativa subsp. indica GN=MT3A PE=3 SV=1) HSP 1 Score: 55.4546 bits (132), Expect = 7.386e-12 Identity = 24/38 (63.16%), Postives = 27/38 (71.05%), Query Frame = 3 Query: 66 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTV 179 MSD CGNCDCAD+SQCVKKG+SY VE + S V Sbjct: 1 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSHFEEV 38 HSP 2 Score: 34.2686 bits (77), Expect = 7.386e-12 Identity = 11/22 (50.00%), Postives = 15/22 (68.18%), Query Frame = 1 Query: 190 DVQAAEAEGNCKCGPTCACVNC 255 +V A E G CKCG +C+C +C Sbjct: 37 EVAAGEENGGCKCGTSCSCTDC 58
BLAST of CN184484 vs. ExPASy Swiss-Prot
Match: MT3_MALDO (Metallothionein-like protein type 3 OS=Malus domestica GN=MT2 PE=3 SV=1) HSP 1 Score: 48.9062 bits (115), Expect = 4.608e-11 Identity = 22/38 (57.89%), Postives = 26/38 (68.42%), Query Frame = 3 Query: 66 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTV 179 MS C NCDCAD +QCVKKG+SY VET+ + TV Sbjct: 1 MSGKCDNCDCADSTQCVKKGNSYDLVIVETENRSMDTV 38 HSP 2 Score: 38.1206 bits (87), Expect = 4.608e-11 Identity = 14/25 (56.00%), Postives = 18/25 (72.00%), Query Frame = 1 Query: 181 VVMDVQAAEAEGNCKCGPTCACVNC 255 V +D AAE +G CKCG C+CV+C Sbjct: 38 VFVDAPAAEHDGKCKCGTGCSCVSC 62 The following BLAST results are available for this feature:
BLAST of CN184484 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN184484 ID=CN184484; Name=CN184484; organism=Citrus sinensis; type=EST; length=256bpback to top |