CN184478

Overview
NameCN184478
Unique NameCN184478
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length325
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13508 contig Csv1_Contig13508:510..834. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN184478 vs. ExPASy Swiss-Prot
Match: CAMT_EUCGU (Caffeoyl-CoA O-methyltransferase OS=Eucalyptus gunnii PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 5.928e-48
Identity = 88/92 (95.65%), Postives = 92/92 (100.00%), Query Frame = -2
Query:   49 SFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGVTICRRIK 324
            SFDFIFVDADKDNYLNYHKRLIELVKVGG+IGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDG+T+CRRI+
Sbjct:  155 SFDFIFVDADKDNYLNYHKRLIELVKVGGLIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGITLCRRIQ 246          
BLAST of CN184478 vs. ExPASy Swiss-Prot
Match: CAMT_MEDSA (Caffeoyl-CoA O-methyltransferase OS=Medicago sativa GN=CCOMT PE=1 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 7.742e-48
Identity = 88/92 (95.65%), Postives = 91/92 (98.91%), Query Frame = -2
Query:   49 SFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGVTICRRIK 324
            S+DFIFVDADKDNYLNYHKRLI+LVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALA DPRIEICMLPVGDG+TICRRIK
Sbjct:  156 SYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAVDPRIEICMLPVGDGITICRRIK 247          
BLAST of CN184478 vs. ExPASy Swiss-Prot
Match: CAMT1_EUCGL (Caffeoyl-CoA O-methyltransferase 1 OS=Eucalyptus globulus GN=CCOMT PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 7.742e-48
Identity = 88/91 (96.70%), Postives = 91/91 (100.00%), Query Frame = -2
Query:   52 SFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGVTICRRI 324
            SFDFIFVDADKDNYLNYHKRLIELVKVGG+IGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDG+T+CRRI
Sbjct:  155 SFDFIFVDADKDNYLNYHKRLIELVKVGGLIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGITLCRRI 245          
BLAST of CN184478 vs. ExPASy Swiss-Prot
Match: CAMT_VITVI (Caffeoyl-CoA O-methyltransferase OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 1.725e-47
Identity = 86/91 (94.51%), Postives = 91/91 (100.00%), Query Frame = -2
Query:   52 SFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGVTICRRI 324
            SFDFIFVDADKDNYLNYHKRLI+LVKVGG+IGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDG+T+CRR+
Sbjct:  151 SFDFIFVDADKDNYLNYHKRLIDLVKVGGIIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGITLCRRL 241          
BLAST of CN184478 vs. ExPASy Swiss-Prot
Match: CAMT_POPTM (Caffeoyl-CoA O-methyltransferase OS=Populus tremuloides PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 1.725e-47
Identity = 86/92 (93.48%), Postives = 92/92 (100.00%), Query Frame = -2
Query:   49 SFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGVTICRRIK 324
            SFDFIFVDADKDNY+NYHKRLIELVKVGG+IGYDNTLWNGSVVAPPDAP+RKYVRYYRDFVLELNKALAADPRIEICMLPVGDG+T+CRRI+
Sbjct:  156 SFDFIFVDADKDNYINYHKRLIELVKVGGLIGYDNTLWNGSVVAPPDAPMRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGITLCRRIQ 247          
BLAST of CN184478 vs. ExPASy Swiss-Prot
Match: CAMT1_POPTR (Caffeoyl-CoA O-methyltransferase 1 OS=Populus trichocarpa GN=CCOAOMT1 PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 1.725e-47
Identity = 86/92 (93.48%), Postives = 92/92 (100.00%), Query Frame = -2
Query:   49 SFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGVTICRRIK 324
            SFDFIFVDADKDNY+NYHKRLIELVKVGG+IGYDNTLWNGSVVAPPDAP+RKYVRYYRDFVLELNKALAADPRIEICMLPVGDG+T+CRRI+
Sbjct:  156 SFDFIFVDADKDNYINYHKRLIELVKVGGLIGYDNTLWNGSVVAPPDAPMRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGITLCRRIQ 247          
BLAST of CN184478 vs. ExPASy Swiss-Prot
Match: CAMT6_TOBAC (Caffeoyl-CoA O-methyltransferase 6 OS=Nicotiana tabacum GN=CCOAOMT6 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 8.559e-47
Identity = 84/91 (92.31%), Postives = 91/91 (100.00%), Query Frame = -2
Query:   52 SFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGVTICRRI 324
            ++DFIFVDADKDNY+NYHKR+IELVKVGGVIGYDNTLWNGSVVAPPDAP+RKYVRYYRDFVLELNKALAADPRIEICMLPVGDG+T+CRRI
Sbjct:  156 TYDFIFVDADKDNYINYHKRIIELVKVGGVIGYDNTLWNGSVVAPPDAPMRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGITLCRRI 246          
BLAST of CN184478 vs. ExPASy Swiss-Prot
Match: CAMT4_ARATH (Probable caffeoyl-CoA O-methyltransferase At4g34050 OS=Arabidopsis thaliana GN=At4g34050 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 8.559e-47
Identity = 84/91 (92.31%), Postives = 91/91 (100.00%), Query Frame = -2
Query:   52 SFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGVTICRRI 324
            ++DFIFVDADKDNY+NYHKRLI+LVK+GGVIGYDNTLWNGSVVAPPDAP+RKYVRYYRDFVLELNKALAADPRIEICMLPVGDG+TICRRI
Sbjct:  168 TYDFIFVDADKDNYINYHKRLIDLVKIGGVIGYDNTLWNGSVVAPPDAPMRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGITICRRI 258          
BLAST of CN184478 vs. ExPASy Swiss-Prot
Match: CAMT_SOLTU (Caffeoyl-CoA O-methyltransferase OS=Solanum tuberosum GN=CCOAOMT PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 1.460e-46
Identity = 85/91 (93.41%), Postives = 90/91 (98.90%), Query Frame = -2
Query:   52 SFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGVTICRRI 324
            S+DFIFVDADKDNYLNYHKRLI+LVKVGG+IGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEIC LPVGDG+T+CRRI
Sbjct:  151 SYDFIFVDADKDNYLNYHKRLIDLVKVGGLIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICQLPVGDGITLCRRI 241          
BLAST of CN184478 vs. ExPASy Swiss-Prot
Match: CAMT2_POPTR (Caffeoyl-CoA O-methyltransferase 2 OS=Populus trichocarpa GN=CCOAOMT2 PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 2.490e-46
Identity = 84/92 (91.30%), Postives = 91/92 (98.91%), Query Frame = -2
Query:   49 SFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGVTICRRIK 324
            ++DFIFVDADKDNY+NYHKRLIELVKVGG+IGYDNTLWNGSVVAP DAP+RKYVRYYRDFVLELNKALAADPRIEICMLPVGDG+T+CRRIK
Sbjct:  156 TYDFIFVDADKDNYINYHKRLIELVKVGGLIGYDNTLWNGSVVAPADAPMRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGITLCRRIK 247          
The following BLAST results are available for this feature:
BLAST of CN184478 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
CAMT_EUCGU5.928e-4895.65Caffeoyl-CoA O-methyltransferase OS=Eucalyptus gun... [more]
CAMT_MEDSA7.742e-4895.65Caffeoyl-CoA O-methyltransferase OS=Medicago sativ... [more]
CAMT1_EUCGL7.742e-4896.70Caffeoyl-CoA O-methyltransferase 1 OS=Eucalyptus g... [more]
CAMT_VITVI1.725e-4794.51Caffeoyl-CoA O-methyltransferase OS=Vitis vinifera... [more]
CAMT_POPTM1.725e-4793.48Caffeoyl-CoA O-methyltransferase OS=Populus tremul... [more]
CAMT1_POPTR1.725e-4793.48Caffeoyl-CoA O-methyltransferase 1 OS=Populus tric... [more]
CAMT6_TOBAC8.559e-4792.31Caffeoyl-CoA O-methyltransferase 6 OS=Nicotiana ta... [more]
CAMT4_ARATH8.559e-4792.31Probable caffeoyl-CoA O-methyltransferase At4g3405... [more]
CAMT_SOLTU1.460e-4693.41Caffeoyl-CoA O-methyltransferase OS=Solanum tubero... [more]
CAMT2_POPTR2.490e-4691.30Caffeoyl-CoA O-methyltransferase 2 OS=Populus tric... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005J06_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005J06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184478 ID=CN184478; Name=CN184478; organism=Citrus sinensis; type=EST; length=325bp
CCGGTCATCGGCGGCGGACCCCCTCAGAGAATTGGTTTAGGCATTTCACT
TGATCCGACGGCAGATAGTGACTCCATCGCCAACGGGGAGCATGCAGATT
TCAATCCTGGGGTCAGCAGCAAGGGCCTTGTTGAGCTCCAAGACGAAGTC
TCGGTAATACCTAACGTACTTCCTAAGGGGAGCATCAGGTGGTGCCACGA
CGGATCCGTTCCATAGGGTGTTGTCGTACCCGATCACCCCTCCAACCTTC
ACCAACTCAATCAACCTCTTGTGGTAGTTTAGGTAGTTGTCCTTATCAGC
GTCCACAAATATGAAGTCAAAGGAC
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