CN184476

Overview
NameCN184476
Unique NameCN184476
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig121 contig Csv1_Contig121:409..1101. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN184476 vs. ExPASy Swiss-Prot
Match: FRI3_SOYBN (Ferritin-3, chloroplastic OS=Glycine max PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 5.637e-52
Identity = 102/146 (69.86%), Postives = 114/146 (78.08%), Query Frame = 2
Query:    5 LYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGVWHFDQMLLHEGDAA 442
            ++AYFDRDN+AL+GL                  MEYQN RGGKVKL SI+ P SEFDH EKGDALYAMELALSLEKLTNEKLL+L SVA +NND Q+ DF+ESEFLGEQVEAI KI++YV+QLR VGKGHGVWHFDQMLLHE   A
Sbjct:  110 MFAYFDRDNVALKGLAKFFKESSEEEREHAEKLMEYQNKRGGKVKLQSIVMPLSEFDHEEKGDALYAMELALSLEKLTNEKLLNLHSVASKNNDVQLADFIESEFLGEQVEAIKKISEYVAQLRRVGKGHGVWHFDQMLLHEEGVA 255          
BLAST of CN184476 vs. ExPASy Swiss-Prot
Match: FRI2_VIGUN (Ferritin-2, chloroplastic OS=Vigna unguiculata GN=PFE2 PE=2 SV=2)

HSP 1 Score: 201.445 bits (511), Expect = 3.654e-51
Identity = 101/143 (70.63%), Postives = 113/143 (79.02%), Query Frame = 2
Query:    5 LYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGVWHFDQMLLHEG 433
            L+AYFDRDN+ALRGL                  MEYQN RGGKVKL SI+ P SEFDHA+KGDAL+AMELALSLEKLTNEKLL L SVA +N D Q+ DFVESEFLGEQVE+I +I++YV+QLR VGKGHGVWHFDQMLLHEG
Sbjct:  104 LFAYFDRDNVALRGLAKFFKESSEEEREHAEKLMEYQNRRGGKVKLQSIVMPLSEFDHADKGDALHAMELALSLEKLTNEKLLHLHSVATKNGDVQLADFVESEFLGEQVESIKRISEYVAQLRRVGKGHGVWHFDQMLLHEG 246          
BLAST of CN184476 vs. ExPASy Swiss-Prot
Match: FRI1_ARATH (Ferritin-1, chloroplastic OS=Arabidopsis thaliana GN=FER1 PE=1 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 4.772e-51
Identity = 96/141 (68.09%), Postives = 112/141 (79.43%), Query Frame = 2
Query:    5 LYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGVWHFDQMLLH 427
            +YAYFDRDN+A++GL                  MEYQN RGG+VKLH I+ P SEF+HAEKGDALYAMELALSLEKLTNEKLL++  VA  NNDPQ+ DFVESEFLGEQ+EAI KI+ Y++QLRM+GKGHGVWHFDQMLL+
Sbjct:  115 MYAYFDRDNVAMKGLAKFFKESSEEERGHAEKFMEYQNQRGGRVKLHPIVSPISEFEHAEKGDALYAMELALSLEKLTNEKLLNVHKVASENNDPQLADFVESEFLGEQIEAIKKISDYITQLRMIGKGHGVWHFDQMLLN 255          
BLAST of CN184476 vs. ExPASy Swiss-Prot
Match: FRI4_SOYBN (Ferritin-4, chloroplastic OS=Glycine max PE=1 SV=2)

HSP 1 Score: 199.904 bits (507), Expect = 1.063e-50
Identity = 101/147 (68.71%), Postives = 117/147 (79.59%), Query Frame = 2
Query:    5 LYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGVWHFDQMLLHE-GDAA 442
            ++AYFDRDN+ALRGL                  MEYQN RGGKVKL SI+ P S+FDHA+KGDAL+AMELALSLEKLTNEKLL+L SVA +N D Q+ DFVE+E+LGEQVEAI +I++YV+QLR VGKGHGVWHFDQMLLHE GDAA
Sbjct:  101 MFAYFDRDNVALRGLAKFFKESSEEEREHAEKLMEYQNKRGGKVKLQSIVMPLSDFDHADKGDALHAMELALSLEKLTNEKLLNLHSVATKNGDVQLADFVETEYLGEQVEAIKRISEYVAQLRRVGKGHGVWHFDQMLLHEGGDAA 247          
BLAST of CN184476 vs. ExPASy Swiss-Prot
Match: FRI_PHAVU (Ferritin, chloroplastic OS=Phaseolus vulgaris GN=PFE PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.389e-50
Identity = 98/146 (67.12%), Postives = 111/146 (76.03%), Query Frame = 2
Query:    5 LYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGVWHFDQMLLHEGDAA 442
            L+AYFDRDN+AL+G                   M+YQN RGG+V LH I   PSEF+H EKGDALYAMELALSLEKL NEKL S+ SVADRN DPQ+ DF+ESEFL EQVEAI KI++YV+QLRMVGKGHGVWHFDQ LLH+G AA
Sbjct:  109 LFAYFDRDNVALKGFARFFKESSEEEREHAEKLMKYQNTRGGRVVLHPIKNVPSEFEHVEKGDALYAMELALSLEKLVNEKLRSVHSVADRNKDPQLADFIESEFLSEQVEAIKKISEYVAQLRMVGKGHGVWHFDQSLLHDGHAA 254          
BLAST of CN184476 vs. ExPASy Swiss-Prot
Match: FRI2_SOYBN (Ferritin-2, chloroplastic OS=Glycine max PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.389e-50
Identity = 97/144 (67.36%), Postives = 114/144 (79.17%), Query Frame = 2
Query:    5 LYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGVWHFDQMLLHEGD 436
            L+AYFDRDNIAL+GL                  ++YQN+RGG+V LH I  PPSEF+H+EKGDALYAMELALSLEKLTNEKLL + SVA+RNNDPQ  DF+ESEFL EQV++I KIA+YV+QLR+VGKGHGVWHFDQ LLH+ D
Sbjct:  112 LFAYFDRDNIALKGLAKFFKESSEEEREHAEQLIKYQNIRGGRVVLHPITSPPSEFEHSEKGDALYAMELALSLEKLTNEKLLHVHSVAERNNDPQXADFIESEFLYEQVKSIKKIAEYVAQLRLVGKGHGVWHFDQKLLHDED 255          
BLAST of CN184476 vs. ExPASy Swiss-Prot
Match: FRI3_VIGUN (Ferritin-3, chloroplastic OS=Vigna unguiculata PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.813e-50
Identity = 97/142 (68.31%), Postives = 112/142 (78.87%), Query Frame = 2
Query:    5 LYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGVWHFDQMLLHE 430
            L+AYFDRDNIAL+GL                  ++YQN+RGG+V LH I  PPSEF+H EKGDALYAMELALSLEKLTNEKLL + SVADRNND Q+ DF+ESEFL EQVE+I KIA+YV+QLR+VGKGHGVWHFDQ LLH+
Sbjct:  115 LFAYFDRDNIALKGLAKFFKESSEEEREHAEKLIKYQNIRGGRVVLHPITSPPSEFEHPEKGDALYAMELALSLEKLTNEKLLYVHSVADRNNDAQLADFIESEFLNEQVESIKKIAEYVTQLRLVGKGHGVWHFDQRLLHD 256          
BLAST of CN184476 vs. ExPASy Swiss-Prot
Match: FRI1_BRANA (Ferritin-1, chloroplastic OS=Brassica napus GN=LSC30 PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.040e-50
Identity = 96/141 (68.09%), Postives = 111/141 (78.72%), Query Frame = 2
Query:    5 LYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGVWHFDQMLLH 427
            +YAYFDRDN+AL+GL                  MEYQN RGG+V LH I+ P S+F+HAEKGDALYAMELALSLEKLTNEKLL+L  VA  NNDPQ+ DFVESEFLGEQ+EAI KI+ +++QLRMVGKGHGVWHFDQMLL+
Sbjct:  114 MYAYFDRDNVALKGLAKFFKESSDEEREHAEKFMEYQNQRGGRVTLHPIVSPISDFEHAEKGDALYAMELALSLEKLTNEKLLNLHRVASENNDPQLADFVESEFLGEQIEAIKKISDFITQLRMVGKGHGVWHFDQMLLN 254          
BLAST of CN184476 vs. ExPASy Swiss-Prot
Match: FRI2_ARATH (Ferritin-2, chloroplastic OS=Arabidopsis thaliana GN=FER2 PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.300e-48
Identity = 96/142 (67.61%), Postives = 110/142 (77.46%), Query Frame = 2
Query:    5 LYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGVWHFDQMLLHE 430
            LYAYFDRDN+ L+G                   MEYQN RGG+VKL SI+ P SEFDH EKGDAL+AMELALSLEKLTNEKLL L+SV  +NND Q+ DFVESEFLGEQVEAI KI++YV+QLR +GKGHGVWHFDQMLL++
Sbjct:  110 LYAYFDRDNVGLKGFAKFFNDSSLEERGHAEMFMEYQNKRGGRVKLQSILMPVSEFDHEEKGDALHAMELALSLEKLTNEKLLKLQSVGVKNNDVQLVDFVESEFLGEQVEAIKKISEYVAQLRRIGKGHGVWHFDQMLLND 251          
BLAST of CN184476 vs. ExPASy Swiss-Prot
Match: FRI_MALXI (Ferritin, chloroplastic OS=Malus xiaojinensis PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.697e-48
Identity = 94/140 (67.14%), Postives = 108/140 (77.14%), Query Frame = 2
Query:    5 LYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGVWHFDQMLL 424
            L+AYFDRDN+AL+G                   M+YQN RGG+V LH+I   PSEF+H EKGDALYAMELALSLEKL NEKLL++ SVADRNNDPQM DF+ESEFL EQVE+I KI++YV+QLR VGKGHGVWHFDQ LL
Sbjct:  110 LFAYFDRDNVALKGFAKFFKESSEEEREHAEKLMKYQNTRGGRVVLHAIKNVPSEFEHVEKGDALYAMELALSLEKLVNEKLLNVHSVADRNNDPQMADFIESEFLSEQVESIKKISEYVAQLRRVGKGHGVWHFDQRLL 249          
The following BLAST results are available for this feature:
BLAST of CN184476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
FRI3_SOYBN5.637e-5269.86Ferritin-3, chloroplastic OS=Glycine max PE=2 SV=1[more]
FRI2_VIGUN3.654e-5170.63Ferritin-2, chloroplastic OS=Vigna unguiculata GN=... [more]
FRI1_ARATH4.772e-5168.09Ferritin-1, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI4_SOYBN1.063e-5068.71Ferritin-4, chloroplastic OS=Glycine max PE=1 SV=2[more]
FRI_PHAVU1.389e-5067.12Ferritin, chloroplastic OS=Phaseolus vulgaris GN=P... [more]
FRI2_SOYBN1.389e-5067.36Ferritin-2, chloroplastic OS=Glycine max PE=2 SV=1[more]
FRI3_VIGUN1.813e-5068.31Ferritin-3, chloroplastic OS=Vigna unguiculata PE=... [more]
FRI1_BRANA4.040e-5068.09Ferritin-1, chloroplastic OS=Brassica napus GN=LSC... [more]
FRI2_ARATH1.300e-4867.61Ferritin-2, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI_MALXI1.697e-4867.14Ferritin, chloroplastic OS=Malus xiaojinensis PE=3... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005J04_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005J04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184476 ID=CN184476; Name=CN184476; organism=Citrus sinensis; type=EST; length=693bp
CATTCTGTATGCGTACTTTGATCGGGATAATATTGCTCTGAGAGGCCTTG
CCAAATTTTTCAAGGAGTCCAGTGAAGAAGAAAGGGAACATGCTGAGAAG
TTTATGGAGTATCAGAACTTGCGCGGTGGAAAAGTAAAACTGCACTCCAT
AATGCAGCCCCCTTCGGAGTTTGATCATGCAGAGAAAGGGGATGCCTTGT
ATGCAATGGAACTAGCATTGTCCCTGGAGAAGCTAACAAACGAGAAGCTT
CTGAGCCTGCGCAGTGTGGCGGATAGAAACAATGATCCCCAAATGGGAGA
TTTTGTCGAGAGTGAATTTTTGGGTGAGCAGGTTGAAGCAATTAACAAGA
TCGCTAAATATGTTTCTCAACTTAGGATGGTTGGGAAAGGCCACGGAGTA
TGGCACTTCGATCAAATGCTTCTCCACGAGGGTGATGCTGCATGATGAAG
AACCATATTGTTACATTTCTTTGTGGTTTAGTCAACTCTTTGCTGCTAAA
TGTTCTGAAGTATCTCTGCCACAGGAGGTTGAATGTGTTGTCAAAAAATA
AGCTGAAACAGTGATAAGTCCTACAAAGTCAATACTCAATAGCCTCCTTG
CTTTATCATATTAGTGTGGTCGCTTTTAGATAGTCTTTTTTATGGTGCTT
TTTCTTTATTTAGTAACAGACAGTGTGAAGGGATCTAATAGTT
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