CN184464

Overview
NameCN184464
Unique NameCN184464
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length631
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8686 contig Csv1_Contig8686:67..697. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN184464 vs. ExPASy Swiss-Prot
Match: PHOT1_ARATH (Phototropin-1 OS=Arabidopsis thaliana GN=PHOT1 PE=1 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 5.810e-42
Identity = 76/110 (69.09%), Postives = 90/110 (81.82%), Query Frame = -1
Query:  302 MLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATDTEKEYKVVDPGMQDLQQN 631
            MLYGYTPFRGKTRQKTF N+L KDLKFP+S P SL  KQL++RLL RDPK RLG  EGANE+K+H FFKG+NWAL+RC NPPEL+ P+F+ + E   KVVDP ++DLQ N
Sbjct:  885 MLYGYTPFRGKTRQKTFTNVLQKDLKFPASIPASLQVKQLIFRLLQRDPKKRLGCFEGANEVKQHSFFKGINWALIRCTNPPELETPIFSGEAENGEKVVDPELEDLQTN 994          
BLAST of CN184464 vs. ExPASy Swiss-Prot
Match: PHOT2_ARATH (Phototropin-2 OS=Arabidopsis thaliana GN=PHOT2 PE=1 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 1.586e-31
Identity = 68/107 (63.55%), Postives = 80/107 (74.77%), Query Frame = -1
Query:  320 MLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATDTE---KEYKVVDPGM 631
            MLYG TPFRGK RQKTFANILHKDL FPSS P SL  +QL+  LL+RDP SRLGS  GANEIK+H FF+G+NW L+R M+PP LDAPL   + +   K+ K  D G+
Sbjct:  797 MLYGRTPFRGKNRQKTFANILHKDLTFPSSIPVSLVGRQLINTLLNRDPSSRLGSKGGANEIKQHAFFRGINWPLIRGMSPPPLDAPLSIIEKDPNAKDIKWEDDGV 903          
BLAST of CN184464 vs. ExPASy Swiss-Prot
Match: G11A_ORYSJ (Protein kinase G11A OS=Oryza sativa subsp. japonica GN=Os06g0291600 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.051e-19
Identity = 41/88 (46.59%), Postives = 60/88 (68.18%), Query Frame = -1
Query:  368 MLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPL 631
            +L+G TPF+G   + T  N++ + L+FP     S  A+ L+  LL ++P+ RLG   GA EIK+HPFF+GVNWAL+RC +PPE+  P+
Sbjct:  466 LLFGKTPFKGSGNRATLFNVIGQPLRFPEYPVVSFSARDLIRGLLVKEPQQRLGCKRGATEIKQHPFFEGVNWALIRCASPPEVPRPV 553          
BLAST of CN184464 vs. ExPASy Swiss-Prot
Match: G11A_ORYSI (Protein kinase G11A OS=Oryza sativa subsp. indica GN=OsI_021818 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.051e-19
Identity = 41/88 (46.59%), Postives = 60/88 (68.18%), Query Frame = -1
Query:  368 MLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPL 631
            +L+G TPF+G   + T  N++ + L+FP     S  A+ L+  LL ++P+ RLG   GA EIK+HPFF+GVNWAL+RC +PPE+  P+
Sbjct:  466 LLFGKTPFKGSGNRATLFNVIGQPLRFPEYPVVSFSARDLIRGLLVKEPQQRLGCKRGATEIKQHPFFEGVNWALIRCASPPEVPRPV 553          
BLAST of CN184464 vs. ExPASy Swiss-Prot
Match: KPK1_PHAVU (Protein kinase PVPK-1 OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.430e-18
Identity = 44/104 (42.31%), Postives = 63/104 (60.58%), Query Frame = -1
Query:  323 MLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLF-ATDTEKEYKVVDPG 631
            +L+G TPF+G   + T  N++ + L+FP S   S  A+ L+  LL ++P+ RL    GA EIK+HPFF+ VNWAL+RC  PPE+   +     TEK+  V   G
Sbjct:  498 LLFGRTPFKGSANRATLFNVIGQPLRFPESPTVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQNVNWALIRCATPPEVPRQVINLPQTEKDLGVKPSG 601          
BLAST of CN184464 vs. ExPASy Swiss-Prot
Match: KPK7_ARATH (Putative serine/threonine-protein kinase PK7 OS=Arabidopsis thaliana GN=PK7 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 9.979e-18
Identity = 40/92 (43.48%), Postives = 59/92 (64.13%), Query Frame = -1
Query:  356 MLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATD 631
            +L+G TPFRG   + T  N++ + L+FP     S  A+ L+  LL ++P+ RL    GA EIK+HPFF+ VNWAL+RC +PP++  P+   D
Sbjct:  449 LLFGITPFRGGDNRATLFNVVGQPLRFPEHPNVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQSVNWALIRCTSPPQIPQPVKPMD 540          
BLAST of CN184464 vs. ExPASy Swiss-Prot
Match: KIN82_YEAST (Probable serine/threonine-protein kinase KIN82 OS=Saccharomyces cerevisiae GN=KIN82 PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 1.702e-17
Identity = 41/86 (47.67%), Postives = 58/86 (67.44%), Query Frame = -1
Query:  374 MLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDA 631
            ML+G TPF+G    +TF+NIL KD+KFP     S + K L+ +LL+++   RLGS  GA +IK+HPFFK V W+ +R  +PP + A
Sbjct:  535 MLFGCTPFKGDNSNETFSNILTKDVKFPHDKEVSKNCKDLIKKLLNKNEAKRLGSKSGAADIKRHPFFKKVQWSFLRNQDPPLIPA 620          
BLAST of CN184464 vs. ExPASy Swiss-Prot
Match: PPK14_SCHPO (Serine/threonine-protein kinase ppk14 OS=Schizosaccharomyces pombe GN=ppk14 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 6.468e-17
Identity = 44/85 (51.76%), Postives = 54/85 (63.53%), Query Frame = -1
Query:  386 MLYGYTPFRGKTRQKTFANILHKDLKFPS---STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPP 631
            MLY  TPF+GK R  TF+NILHKD+ FP    +   S   K L+ +LL +D   RLGS  GA ++K HPFFK V WAL+R   PP
Sbjct:  415 MLYATTPFKGKNRNMTFSNILHKDVIFPEYADAPSISSLCKNLIRKLLVKDENDRLGSQAGAADVKLHPFFKNVQWALLRHTEPP 499          
BLAST of CN184464 vs. ExPASy Swiss-Prot
Match: PPK22_SCHPO (Serine/threonine-protein kinase ppk22 OS=Schizosaccharomyces pombe GN=ppk22 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 8.448e-17
Identity = 42/85 (49.41%), Postives = 56/85 (65.88%), Query Frame = -1
Query:  386 MLYGYTPFRGKTRQKTFANILHKDLKFPS---STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPP 631
            +LYG TPF+GK R  TF+NIL+ D+ FP    +   S   K L+ RLL +D   R GS  GA++IK+HPFF+ + WAL+R M PP
Sbjct:  375 ILYGTTPFKGKNRHATFSNILYSDVSFPEYHGAPNVSSTCKSLIRRLLVKDESKRCGSVAGASDIKQHPFFRHIQWALLRSMKPP 459          
BLAST of CN184464 vs. ExPASy Swiss-Prot
Match: NRC2_NEUCR (Serine/threonine-protein kinase nrc-2 OS=Neurospora crassa GN=nrc-2 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 8.448e-17
Identity = 43/85 (50.59%), Postives = 55/85 (64.71%), Query Frame = -1
Query:  386 MLYGYTPFRGKTRQKTFANILHKDLKFPS---STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPP 631
            MLYG TPF+GK R  TFANIL +D+ FP    +   S   K L+ +LL +D   RLG+  GA++IK HPFF+   WAL+R M PP
Sbjct:  462 MLYGTTPFKGKNRNATFANILREDIPFPDHAGAPQISNLCKSLIRKLLIKDENRRLGARAGASDIKTHPFFRTTQWALIRHMKPP 546          
The following BLAST results are available for this feature:
BLAST of CN184464 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
PHOT1_ARATH5.810e-4269.09Phototropin-1 OS=Arabidopsis thaliana GN=PHOT1 PE=... [more]
PHOT2_ARATH1.586e-3163.55Phototropin-2 OS=Arabidopsis thaliana GN=PHOT2 PE=... [more]
G11A_ORYSJ4.051e-1946.59Protein kinase G11A OS=Oryza sativa subsp. japonic... [more]
G11A_ORYSI4.051e-1946.59Protein kinase G11A OS=Oryza sativa subsp. indica ... [more]
KPK1_PHAVU3.430e-1842.31Protein kinase PVPK-1 OS=Phaseolus vulgaris PE=2 S... [more]
KPK7_ARATH9.979e-1843.48Putative serine/threonine-protein kinase PK7 OS=Ar... [more]
KIN82_YEAST1.702e-1747.67Probable serine/threonine-protein kinase KIN82 OS=... [more]
PPK14_SCHPO6.468e-1751.76Serine/threonine-protein kinase ppk14 OS=Schizosac... [more]
PPK22_SCHPO8.448e-1749.41Serine/threonine-protein kinase ppk22 OS=Schizosac... [more]
NRC2_NEUCR8.448e-1750.59Serine/threonine-protein kinase nrc-2 OS=Neurospor... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0005I22_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005I22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184464 ID=CN184464; Name=CN184464; organism=Citrus sinensis; type=EST; length=631bp
GCAGGACAAAACTTACAAAGTACCCAGCAAAACAGATACAAACCATGCAT
ACAAATAATATATTACATACACAAGGCATCAACAAAATTCTCAGTTTCTT
TCTACAAGCTACAGCAGCCTCCAAGATTATCTATCGACAACAATGCCGAG
GTGAAAGCACAAGCAGAATCAATGAAACTGTTATTACTCGGCAAGTTGAG
CTCCCTTTCCATAGCCTCTACTAAATGGGATGCACGTACCAACACAAATT
TGCAGCAGACACTTCAAATAAAATAACAAAGAATTAGACTCCTCAGAAAA
CGTTTTGTTGCAGATCTTGCATTCCTGGATCCACAACTTTATACTCCTTC
TCAGTATCGGTAGCGAAGAGAGGGGCATCCAGCTCAGGAGGGTTCATGCA
ACGAACTAGTGCCCAATTGACACCTTTGAAAAATGGATGCTTCTTTATTT
CATTTGCTCCTTCATGCGAACCTAATCTGCTCTTTGGATCTCTATGCAAC
AGGCGGTACATTAGCTGCTTTGCATGAAGACTTGTCGGTGTACTTGACGG
AAATTTGAGGTCTTTGTGGAGAATATTTGCGAATGTTTTTTGTCTTGTCT
TGCCCCTGAATGGTGTGTATCCATAAAGCAT
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